RNA–Protein interactions for RNA: ENST00000441182.1

CDCA4P2-201, Transcript of cell division cycle associated 4 pseudogene 2, humanhuman

BASIC

Gene CDCA4P2, Length 718 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P2-201ENST00000441182 CASKIN1Q8WXD9 1431 aa34.29■■■■□ 3.08
CDCA4P2-201ENST00000441182 MYO5CQ9NQX4 1742 aa34.28■■■■□ 3.08
CDCA4P2-201ENST00000441182 MAGI2Q86UL8 1455 aa34.27■■■■□ 3.08
CDCA4P2-201ENST00000441182 ZFYVE16Q7Z3T8 1539 aa34.26■■■■□ 3.08
CDCA4P2-201ENST00000441182 MADDQ8WXG6 1647 aa34.26■■■■□ 3.07
CDCA4P2-201ENST00000441182 PCF11O94913 1555 aaKnown RBP34.25■■■■□ 3.07
CDCA4P2-201ENST00000441182 CLIP1P30622 1438 aa34.24■■■■□ 3.07
CDCA4P2-201ENST00000441182 SIGLEC1Q9BZZ2 1709 aa34.23■■■■□ 3.07
CDCA4P2-201ENST00000441182 CCDC18Q5T9S5 1454 aa34.19■■■■□ 3.06
CDCA4P2-201ENST00000441182 ARHGAP5Q13017 1502 aa34.16■■■■□ 3.06
CDCA4P2-201ENST00000441182 FYCO1Q9BQS8 1478 aa34.12■■■■□ 3.05
CDCA4P2-201ENST00000441182 RIMS1Q86UR5 1692 aaKnown RBP34.12■■■■□ 3.05
CDCA4P2-201ENST00000441182 CDC42BPBQ9Y5S2 1711 aa34.11■■■■□ 3.05
CDCA4P2-201ENST00000441182 ATP10AO60312 1499 aa34.1■■■■□ 3.05
CDCA4P2-201ENST00000441182 AFAP1Q8N556 730 aa34.1■■■■□ 3.05
CDCA4P2-201ENST00000441182 ZNF518AQ6AHZ1 1483 aa34.09■■■■□ 3.05
CDCA4P2-201ENST00000441182 ILDR1Q86SU0 546 aaPredicted RBP34.07■■■■□ 3.04
CDCA4P2-201ENST00000441182 KDM5CP41229 1560 aa34.06■■■■□ 3.04
CDCA4P2-201ENST00000441182 C9orf84Q5VXU9 1444 aa34.05■■■■□ 3.04
CDCA4P2-201ENST00000441182 MLECQ14165 292 aa34.05■■■■□ 3.04
CDCA4P2-201ENST00000441182 PREX2Q70Z35 1606 aa34.04■■■■□ 3.04
CDCA4P2-201ENST00000441182 ARHGEF12Q9NZN5 1544 aa34.02■■■■□ 3.04
CDCA4P2-201ENST00000441182 LMTK3Q96Q04 1460 aa34.01■■■■□ 3.04
CDCA4P2-201ENST00000441182 TRAPPC8Q9Y2L5 1435 aa33.98■■■■□ 3.03
CDCA4P2-201ENST00000441182 ABCC1P33527 1531 aa33.97■■■■□ 3.03
CDCA4P2-201ENST00000441182 CDC42BPAQ5VT25 1732 aa33.96■■■■□ 3.03
CDCA4P2-201ENST00000441182 MLH3Q9UHC1 1453 aa33.95■■■■□ 3.02
CDCA4P2-201ENST00000441182 FER1L4A9Z1Z3 1794 aa33.94■■■■□ 3.02
CDCA4P2-201ENST00000441182 PLPPR3Q6T4P5 718 aa33.94■■■■□ 3.02
CDCA4P2-201ENST00000441182 DIP2CQ9Y2E4 1556 aa33.93■■■■□ 3.02
CDCA4P2-201ENST00000441182 ITSN2Q9NZM3 1697 aa33.9■■■■□ 3.02
CDCA4P2-201ENST00000441182 GPATCH8Q9UKJ3 1502 aaKnown RBP33.89■■■■□ 3.02
CDCA4P2-201ENST00000441182 MYT1LQ9UL68 1186 aa33.89■■■■□ 3.02
CDCA4P2-201ENST00000441182 ABCA6Q8N139 1617 aa33.87■■■■□ 3.01
CDCA4P2-201ENST00000441182 REREQ9P2R6 1566 aa33.86■■■■□ 3.01
CDCA4P2-201ENST00000441182 HSPA2P54652 639 aa33.83■■■■□ 3.01
CDCA4P2-201ENST00000441182 SAMD9LQ8IVG5 1584 aa33.83■■■■□ 3.01
CDCA4P2-201ENST00000441182 ZNF777Q9ULD5 760 aaPredicted RBP33.83■■■■□ 3.01
CDCA4P2-201ENST00000441182 KIDINS220Q9ULH0 1771 aa33.8■■■■□ 3
CDCA4P2-201ENST00000441182 CEP162Q5TB80 1403 aa33.8■■■■□ 3
CDCA4P2-201ENST00000441182 CEBPAP49715 358 aaPredicted RBP33.8■■■■□ 3
CDCA4P2-201ENST00000441182 MTUS2Q5JR59 1369 aa33.77■■■■□ 3
CDCA4P2-201ENST00000441182 AGLP35573 1532 aa33.77■■■■□ 3
CDCA4P2-201ENST00000441182 SYCP2Q9BX26 1530 aa33.76■■■■□ 3
CDCA4P2-201ENST00000441182 HNRNPMP52272 730 aaKnown RBP eCLIP33.76■■■□□ 2.99
CDCA4P2-201ENST00000441182 CFDP1Q9UEE9 299 aaPredicted RBP33.75■■■□□ 2.99
CDCA4P2-201ENST00000441182 CCNB3Q8WWL7 1395 aa33.74■■■□□ 2.99
CDCA4P2-201ENST00000441182 KIAA1107Q9UPP5 1409 aa33.72■■■□□ 2.99
CDCA4P2-201ENST00000441182 SPAG9O60271 1321 aaKnown RBP33.68■■■□□ 2.98
CDCA4P2-201ENST00000441182 PLEKHH2Q8IVE3 1493 aa33.67■■■□□ 2.98
CDCA4P2-201ENST00000441182 EHBP1L1Q8N3D4 1523 aa33.65■■■□□ 2.98
CDCA4P2-201ENST00000441182 TIAM1Q13009 1591 aa33.64■■■□□ 2.98
CDCA4P2-201ENST00000441182 PREX1Q8TCU6 1659 aa33.64■■■□□ 2.98
CDCA4P2-201ENST00000441182 ZNF644Q9H582 1327 aaPredicted RBP33.63■■■□□ 2.97
CDCA4P2-201ENST00000441182 LOC105371045A0A1W2PR82 267 aa33.61■■■□□ 2.97
CDCA4P2-201ENST00000441182 ATP7AQ04656 1500 aa33.6■■■□□ 2.97
CDCA4P2-201ENST00000441182 FBXO41Q8TF61 875 aa33.6■■■□□ 2.97
CDCA4P2-201ENST00000441182 SETD1BQ9UPS6 1966 aaKnown RBP33.6■■■□□ 2.97
CDCA4P2-201ENST00000441182 C3P01024 1663 aa33.59■■■□□ 2.97
CDCA4P2-201ENST00000441182 INO80Q9ULG1 1556 aaPredicted RBP33.58■■■□□ 2.97
CDCA4P2-201ENST00000441182 ESF1Q9H501 851 aaKnown RBP33.56■■■□□ 2.96
CDCA4P2-201ENST00000441182 MBD5Q9P267 1494 aa33.56■■■□□ 2.96
CDCA4P2-201ENST00000441182 UHRF1BP1Q6BDS2 1440 aa33.53■■■□□ 2.96
CDCA4P2-201ENST00000441182 CNTLNQ9NXG0 1405 aa33.53■■■□□ 2.96
CDCA4P2-201ENST00000441182 PLXNC1O60486 1568 aa33.52■■■□□ 2.96
CDCA4P2-201ENST00000441182 A2MP01023 1474 aa33.51■■■□□ 2.96
CDCA4P2-201ENST00000441182 SUPT6HQ7KZ85 1726 aaKnown RBP33.51■■■□□ 2.96
CDCA4P2-201ENST00000441182 NCOA2Q15596 1464 aa33.49■■■□□ 2.95
CDCA4P2-201ENST00000441182 STRCQ7RTU9 1775 aa33.45■■■□□ 2.95
CDCA4P2-201ENST00000441182 ZMYM3Q14202 1370 aa33.45■■■□□ 2.94
CDCA4P2-201ENST00000441182 VPS8Q8N3P4 1428 aa33.45■■■□□ 2.94
CDCA4P2-201ENST00000441182 RTEL1-TNFRSF6BF6WH68 1400 aa33.42■■■□□ 2.94
CDCA4P2-201ENST00000441182 MROH2AA6NES4 1674 aa33.42■■■□□ 2.94
CDCA4P2-201ENST00000441182 ADGBQ8N7X0 1667 aa33.39■■■□□ 2.94
CDCA4P2-201ENST00000441182 GGT6Q6P531 493 aa33.38■■■□□ 2.93
CDCA4P2-201ENST00000441182 CAMSAP2Q08AD1 1489 aa33.37■■■□□ 2.93
CDCA4P2-201ENST00000441182 NPATQ14207 1427 aa33.37■■■□□ 2.93
CDCA4P2-201ENST00000441182 LRRC9Q6ZRR7 1453 aa33.37■■■□□ 2.93
CDCA4P2-201ENST00000441182 CERKQ8TCT0 537 aa33.35■■■□□ 2.93
CDCA4P2-201ENST00000441182 DMRT2Q9Y5R5 561 aa33.35■■■□□ 2.93
CDCA4P2-201ENST00000441182 CLTCQ00610 1675 aaKnown RBP33.35■■■□□ 2.93
CDCA4P2-201ENST00000441182 CCDC141Q6ZP82 1450 aa33.34■■■□□ 2.93
CDCA4P2-201ENST00000441182 DHX29Q7Z478 1369 aaKnown RBP33.34■■■□□ 2.93
CDCA4P2-201ENST00000441182 PPP6R1Q9UPN7 881 aa33.32■■■□□ 2.92
CDCA4P2-201ENST00000441182 KANK4Q5T7N3 995 aaPredicted RBP33.31■■■□□ 2.92
CDCA4P2-201ENST00000441182 RSPH4AQ5TD94 716 aa33.31■■■□□ 2.92
CDCA4P2-201ENST00000441182 PTPRKQ15262 1439 aa33.28■■■□□ 2.92
CDCA4P2-201ENST00000441182 MAP3K1Q13233 1512 aa33.27■■■□□ 2.92
CDCA4P2-201ENST00000441182 PTPRTO14522 1441 aa33.27■■■□□ 2.92
CDCA4P2-201ENST00000441182 NCOA1Q15788 1441 aa33.26■■■□□ 2.91
CDCA4P2-201ENST00000441182 ARHGEF5Q12774 1597 aa33.25■■■□□ 2.91
CDCA4P2-201ENST00000441182 KIF3BO15066 747 aa33.21■■■□□ 2.91
CDCA4P2-201ENST00000441182 CAMSAP1Q5T5Y3 1602 aa33.19■■■□□ 2.9
CDCA4P2-201ENST00000441182 TSPY4P0CV99 314 aa33.17■■■□□ 2.9
CDCA4P2-201ENST00000441182 TSPY10P0CW01 314 aa33.17■■■□□ 2.9
CDCA4P2-201ENST00000441182 MYO3AQ8NEV4 1616 aa33.17■■■□□ 2.9
CDCA4P2-201ENST00000441182 ZNF142P52746 1687 aaPredicted RBP33.13■■■□□ 2.89
CDCA4P2-201ENST00000441182 MYOM3Q5VTT5 1437 aa33.12■■■□□ 2.89
CDCA4P2-201ENST00000441182 MIA2Q96PC5 1412 aa33.12■■■□□ 2.89
CDCA4P2-201ENST00000441182 CEP170BQ9Y4F5 1589 aaPredicted RBP33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms