RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 POGZQ7Z3K3 1410 aa18.99■□□□□ 0.63
UBE2D4-204ENST00000440899 YEATS2Q9ULM3 1422 aa18.99■□□□□ 0.63
UBE2D4-204ENST00000440899 MADDQ8WXG6 1647 aa18.96■□□□□ 0.63
UBE2D4-204ENST00000440899 KIF14Q15058 1648 aa18.96■□□□□ 0.63
UBE2D4-204ENST00000440899 CASKIN1Q8WXD9 1431 aa18.95■□□□□ 0.62
UBE2D4-204ENST00000440899 MYO5CQ9NQX4 1742 aa18.94■□□□□ 0.62
UBE2D4-204ENST00000440899 CCDC18Q5T9S5 1454 aa18.92■□□□□ 0.62
UBE2D4-204ENST00000440899 ATP10AO60312 1499 aa18.91■□□□□ 0.62
UBE2D4-204ENST00000440899 ARHGAP5Q13017 1502 aa18.91■□□□□ 0.62
UBE2D4-204ENST00000440899 MLECQ14165 292 aa18.91■□□□□ 0.62
UBE2D4-204ENST00000440899 ZNF518AQ6AHZ1 1483 aa18.9■□□□□ 0.62
UBE2D4-204ENST00000440899 AFAP1Q8N556 730 aa18.9■□□□□ 0.62
UBE2D4-204ENST00000440899 RIMS1Q86UR5 1692 aaKnown RBP18.89■□□□□ 0.61
UBE2D4-204ENST00000440899 LRRIQ1Q96JM4 1722 aa18.89■□□□□ 0.61
UBE2D4-204ENST00000440899 C9orf84Q5VXU9 1444 aa18.88■□□□□ 0.61
UBE2D4-204ENST00000440899 PCF11O94913 1555 aaKnown RBP18.88■□□□□ 0.61
UBE2D4-204ENST00000440899 SIGLEC1Q9BZZ2 1709 aa18.86■□□□□ 0.61
UBE2D4-204ENST00000440899 LMTK3Q96Q04 1460 aa18.86■□□□□ 0.61
UBE2D4-204ENST00000440899 FYCO1Q9BQS8 1478 aa18.86■□□□□ 0.61
UBE2D4-204ENST00000440899 PLPPR3Q6T4P5 718 aa18.86■□□□□ 0.61
UBE2D4-204ENST00000440899 MYT1LQ9UL68 1186 aa18.86■□□□□ 0.61
UBE2D4-204ENST00000440899 KDM5CP41229 1560 aa18.84■□□□□ 0.61
UBE2D4-204ENST00000440899 CDC42BPBQ9Y5S2 1711 aa18.82■□□□□ 0.6
UBE2D4-204ENST00000440899 ARHGEF12Q9NZN5 1544 aa18.8■□□□□ 0.6
UBE2D4-204ENST00000440899 MLH3Q9UHC1 1453 aa18.8■□□□□ 0.6
UBE2D4-204ENST00000440899 PREX2Q70Z35 1606 aa18.8■□□□□ 0.6
UBE2D4-204ENST00000440899 HSPA2P54652 639 aa18.79■□□□□ 0.6
UBE2D4-204ENST00000440899 TRAPPC8Q9Y2L5 1435 aa18.79■□□□□ 0.6
UBE2D4-204ENST00000440899 FER1L4A9Z1Z3 1794 aa18.78■□□□□ 0.6
UBE2D4-204ENST00000440899 ABCC1P33527 1531 aa18.77■□□□□ 0.6
UBE2D4-204ENST00000440899 ZNF777Q9ULD5 760 aaPredicted RBP18.76■□□□□ 0.59
UBE2D4-204ENST00000440899 DIP2CQ9Y2E4 1556 aa18.76■□□□□ 0.59
UBE2D4-204ENST00000440899 CEBPAP49715 358 aaPredicted RBP18.75■□□□□ 0.59
UBE2D4-204ENST00000440899 FBXO41Q8TF61 875 aa18.75■□□□□ 0.59
UBE2D4-204ENST00000440899 REREQ9P2R6 1566 aa18.74■□□□□ 0.59
UBE2D4-204ENST00000440899 CDC42BPAQ5VT25 1732 aa18.73■□□□□ 0.59
UBE2D4-204ENST00000440899 GPATCH8Q9UKJ3 1502 aaKnown RBP18.73■□□□□ 0.59
UBE2D4-204ENST00000440899 CFDP1Q9UEE9 299 aaPredicted RBP18.72■□□□□ 0.59
UBE2D4-204ENST00000440899 ABCA6Q8N139 1617 aa18.71■□□□□ 0.59
UBE2D4-204ENST00000440899 MTUS2Q5JR59 1369 aa18.71■□□□□ 0.59
UBE2D4-204ENST00000440899 ITSN2Q9NZM3 1697 aa18.71■□□□□ 0.59
UBE2D4-204ENST00000440899 ESF1Q9H501 851 aaKnown RBP18.71■□□□□ 0.59
UBE2D4-204ENST00000440899 CCNB3Q8WWL7 1395 aa18.7■□□□□ 0.58
UBE2D4-204ENST00000440899 AGLP35573 1532 aa18.7■□□□□ 0.58
UBE2D4-204ENST00000440899 HNRNPMP52272 730 aaKnown RBP eCLIP18.7■□□□□ 0.58
UBE2D4-204ENST00000440899 SPAG9O60271 1321 aaKnown RBP18.69■□□□□ 0.58
UBE2D4-204ENST00000440899 KIAA1107Q9UPP5 1409 aa18.67■□□□□ 0.58
UBE2D4-204ENST00000440899 KIDINS220Q9ULH0 1771 aa18.67■□□□□ 0.58
UBE2D4-204ENST00000440899 SAMD9LQ8IVG5 1584 aa18.67■□□□□ 0.58
UBE2D4-204ENST00000440899 PLEKHH2Q8IVE3 1493 aa18.66■□□□□ 0.58
UBE2D4-204ENST00000440899 SYCP2Q9BX26 1530 aa18.66■□□□□ 0.58
UBE2D4-204ENST00000440899 CEP162Q5TB80 1403 aa18.65■□□□□ 0.58
UBE2D4-204ENST00000440899 PREX1Q8TCU6 1659 aa18.64■□□□□ 0.57
UBE2D4-204ENST00000440899 SETD1BQ9UPS6 1966 aaKnown RBP18.64■□□□□ 0.57
UBE2D4-204ENST00000440899 UHRF1BP1Q6BDS2 1440 aa18.64■□□□□ 0.57
UBE2D4-204ENST00000440899 CNTLNQ9NXG0 1405 aa18.62■□□□□ 0.57
UBE2D4-204ENST00000440899 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
UBE2D4-204ENST00000440899 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
UBE2D4-204ENST00000440899 ATP7AQ04656 1500 aa18.59■□□□□ 0.57
UBE2D4-204ENST00000440899 EHBP1L1Q8N3D4 1523 aa18.59■□□□□ 0.57
UBE2D4-204ENST00000440899 C3P01024 1663 aa18.58■□□□□ 0.57
UBE2D4-204ENST00000440899 CERKQ8TCT0 537 aa18.58■□□□□ 0.56
UBE2D4-204ENST00000440899 A2MP01023 1474 aa18.56■□□□□ 0.56
UBE2D4-204ENST00000440899 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
UBE2D4-204ENST00000440899 INO80Q9ULG1 1556 aaPredicted RBP18.55■□□□□ 0.56
UBE2D4-204ENST00000440899 ZMYM3Q14202 1370 aa18.55■□□□□ 0.56
UBE2D4-204ENST00000440899 MBD5Q9P267 1494 aa18.53■□□□□ 0.56
UBE2D4-204ENST00000440899 NPATQ14207 1427 aa18.53■□□□□ 0.56
UBE2D4-204ENST00000440899 GGT6Q6P531 493 aa18.53■□□□□ 0.56
UBE2D4-204ENST00000440899 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
UBE2D4-204ENST00000440899 PLXNC1O60486 1568 aa18.52■□□□□ 0.56
UBE2D4-204ENST00000440899 SUPT6HQ7KZ85 1726 aaKnown RBP18.52■□□□□ 0.55
UBE2D4-204ENST00000440899 RTEL1-TNFRSF6BF6WH68 1400 aa18.51■□□□□ 0.55
UBE2D4-204ENST00000440899 STRCQ7RTU9 1775 aa18.51■□□□□ 0.55
UBE2D4-204ENST00000440899 LOC105371045A0A1W2PR82 267 aa18.51■□□□□ 0.55
UBE2D4-204ENST00000440899 MROH2AA6NES4 1674 aa18.5■□□□□ 0.55
UBE2D4-204ENST00000440899 RSPH4AQ5TD94 716 aa18.5■□□□□ 0.55
UBE2D4-204ENST00000440899 PTPRTO14522 1441 aa18.49■□□□□ 0.55
UBE2D4-204ENST00000440899 NCOA2Q15596 1464 aa18.49■□□□□ 0.55
UBE2D4-204ENST00000440899 DHX29Q7Z478 1369 aaKnown RBP18.48■□□□□ 0.55
UBE2D4-204ENST00000440899 ADGBQ8N7X0 1667 aa18.46■□□□□ 0.55
UBE2D4-204ENST00000440899 VPS8Q8N3P4 1428 aa18.46■□□□□ 0.55
UBE2D4-204ENST00000440899 NCOA1Q15788 1441 aa18.45■□□□□ 0.54
UBE2D4-204ENST00000440899 CCDC141Q6ZP82 1450 aa18.45■□□□□ 0.54
UBE2D4-204ENST00000440899 CAMSAP2Q08AD1 1489 aa18.44■□□□□ 0.54
UBE2D4-204ENST00000440899 CLTCQ00610 1675 aaKnown RBP18.44■□□□□ 0.54
UBE2D4-204ENST00000440899 PTPRKQ15262 1439 aa18.43■□□□□ 0.54
UBE2D4-204ENST00000440899 KIF3BO15066 747 aa18.42■□□□□ 0.54
UBE2D4-204ENST00000440899 TSPY4P0CV99 314 aa18.42■□□□□ 0.54
UBE2D4-204ENST00000440899 TSPY10P0CW01 314 aa18.42■□□□□ 0.54
UBE2D4-204ENST00000440899 LRRC9Q6ZRR7 1453 aa18.41■□□□□ 0.54
UBE2D4-204ENST00000440899 CAMSAP1Q5T5Y3 1602 aa18.4■□□□□ 0.54
UBE2D4-204ENST00000440899 NCKAP5LQ9HCH0 1330 aa18.38■□□□□ 0.53
UBE2D4-204ENST00000440899 PKD2Q13563 968 aa18.37■□□□□ 0.53
UBE2D4-204ENST00000440899 KANK4Q5T7N3 995 aaPredicted RBP18.37■□□□□ 0.53
UBE2D4-204ENST00000440899 MAP3K1Q13233 1512 aa18.37■□□□□ 0.53
UBE2D4-204ENST00000440899 ARHGEF5Q12774 1597 aa18.37■□□□□ 0.53
UBE2D4-204ENST00000440899 WASHC2CQ9Y4E1 1318 aa18.36■□□□□ 0.53
UBE2D4-204ENST00000440899 MYO3AQ8NEV4 1616 aa18.34■□□□□ 0.53
UBE2D4-204ENST00000440899 CEP170BQ9Y4F5 1589 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms