RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 CDC42BPBQ9Y5S2 1711 aa30.21■■■□□ 2.43
VRK2-207ENST00000440705 PTPRKQ15262 1439 aa30.2■■■□□ 2.42
VRK2-207ENST00000440705 DNMT1P26358 1616 aaKnown RBP30.17■■■□□ 2.42
VRK2-207ENST00000440705 SETD5Q9C0A6 1442 aa30.16■■■□□ 2.42
VRK2-207ENST00000440705 PLCH2O75038 1416 aa30.16■■■□□ 2.42
VRK2-207ENST00000440705 DAPK1P53355 1430 aa30.16■■■□□ 2.42
VRK2-207ENST00000440705 HRCP23327 699 aa30.15■■■□□ 2.42
VRK2-207ENST00000440705 ARHGAP5Q13017 1502 aa30.15■■■□□ 2.42
VRK2-207ENST00000440705 CCER1Q8TC90 406 aaPredicted RBP30.14■■■□□ 2.42
VRK2-207ENST00000440705 ABCA9Q8IUA7 1624 aa30.13■■■□□ 2.41
VRK2-207ENST00000440705 ABCC5O15440 1437 aa30.12■■■□□ 2.41
VRK2-207ENST00000440705 MAPKBP1O60336 1514 aa30.11■■■□□ 2.41
VRK2-207ENST00000440705 ARAP3Q8WWN8 1544 aa30.1■■■□□ 2.41
VRK2-207ENST00000440705 RAB3GAP2Q9H2M9 1393 aa30.09■■■□□ 2.41
VRK2-207ENST00000440705 HFM1A2PYH4 1435 aa30.09■■■□□ 2.41
VRK2-207ENST00000440705 SAMD9LQ8IVG5 1584 aa30.08■■■□□ 2.41
VRK2-207ENST00000440705 EFCAB2Q5VUJ9 269 aa30.07■■■□□ 2.41
VRK2-207ENST00000440705 AKNAQ7Z591 1439 aa30.07■■■□□ 2.4
VRK2-207ENST00000440705 PLEKHH2Q8IVE3 1493 aa30.06■■■□□ 2.4
VRK2-207ENST00000440705 CHIC2Q9UKJ5 165 aa30.06■■■□□ 2.4
VRK2-207ENST00000440705 RSPH4AQ5TD94 716 aa30.05■■■□□ 2.4
VRK2-207ENST00000440705 ROCK1Q13464 1354 aa30.05■■■□□ 2.4
VRK2-207ENST00000440705 ARHGEF5Q12774 1597 aa30.04■■■□□ 2.4
VRK2-207ENST00000440705 ZEB1P37275 1124 aaPredicted RBP30.03■■■□□ 2.4
VRK2-207ENST00000440705 NAIPQ13075 1403 aa30.02■■■□□ 2.4
VRK2-207ENST00000440705 KIAA1107Q9UPP5 1409 aa30.02■■■□□ 2.4
VRK2-207ENST00000440705 CROCC2H7BZ55 1655 aa30.02■■■□□ 2.4
VRK2-207ENST00000440705 MBD5Q9P267 1494 aa30.01■■■□□ 2.39
VRK2-207ENST00000440705 HNRNPMP52272 730 aaKnown RBP eCLIP30■■■□□ 2.39
VRK2-207ENST00000440705 SHANK2Q9UPX8 1470 aa29.98■■■□□ 2.39
VRK2-207ENST00000440705 RRP7BPQ9NSQ0 103 aa29.98■■■□□ 2.39
VRK2-207ENST00000440705 TSPY4P0CV99 314 aa29.98■■■□□ 2.39
VRK2-207ENST00000440705 TSPY10P0CW01 314 aa29.98■■■□□ 2.39
VRK2-207ENST00000440705 GCC2Q8IWJ2 1684 aa29.97■■■□□ 2.39
VRK2-207ENST00000440705 CCDC141Q6ZP82 1450 aa29.96■■■□□ 2.39
VRK2-207ENST00000440705 ADGBQ8N7X0 1667 aa29.96■■■□□ 2.39
VRK2-207ENST00000440705 SYCP2Q9BX26 1530 aa29.96■■■□□ 2.39
VRK2-207ENST00000440705 ADGRL2O95490 1459 aa29.94■■■□□ 2.38
VRK2-207ENST00000440705 FANCAO15360 1455 aa29.94■■■□□ 2.38
VRK2-207ENST00000440705 CD109Q6YHK3 1445 aa29.93■■■□□ 2.38
VRK2-207ENST00000440705 DHX57Q6P158 1386 aaKnown RBP29.91■■■□□ 2.38
VRK2-207ENST00000440705 ANKRD30AQ9BXX3 1397 aa29.91■■■□□ 2.38
VRK2-207ENST00000440705 NCOA1Q15788 1441 aa29.91■■■□□ 2.38
VRK2-207ENST00000440705 C9orf84Q5VXU9 1444 aa29.91■■■□□ 2.38
VRK2-207ENST00000440705 ABCC1P33527 1531 aa29.91■■■□□ 2.38
VRK2-207ENST00000440705 GLI2P10070 1586 aa29.88■■■□□ 2.37
VRK2-207ENST00000440705 ACIN1Q9UKV3 1341 aaKnown RBP29.87■■■□□ 2.37
VRK2-207ENST00000440705 ARHGEF12Q9NZN5 1544 aa29.87■■■□□ 2.37
VRK2-207ENST00000440705 CLSPNQ9HAW4 1339 aa29.86■■■□□ 2.37
VRK2-207ENST00000440705 CFAP74Q9C0B2 1584 aa29.84■■■□□ 2.37
VRK2-207ENST00000440705 MAST1Q9Y2H9 1570 aa29.84■■■□□ 2.37
VRK2-207ENST00000440705 MAP3K4Q9Y6R4 1608 aa29.81■■■□□ 2.36
VRK2-207ENST00000440705 ADGRL1O94910 1474 aa29.8■■■□□ 2.36
VRK2-207ENST00000440705 DIP2BQ9P265 1576 aa29.79■■■□□ 2.36
VRK2-207ENST00000440705 TRAPPC8Q9Y2L5 1435 aa29.78■■■□□ 2.36
VRK2-207ENST00000440705 FAM69CQ0P6D2 419 aa29.77■■■□□ 2.36
VRK2-207ENST00000440705 KDM6BO15054 1643 aa29.77■■■□□ 2.36
VRK2-207ENST00000440705 SCAPERQ9BY12 1400 aa29.76■■■□□ 2.36
VRK2-207ENST00000440705 NEO1Q92859 1461 aa29.74■■■□□ 2.35
VRK2-207ENST00000440705 KIF15Q9NS87 1388 aa29.74■■■□□ 2.35
VRK2-207ENST00000440705 ANKRD50Q9ULJ7 1429 aa29.72■■■□□ 2.35
VRK2-207ENST00000440705 PLXNC1O60486 1568 aa29.71■■■□□ 2.35
VRK2-207ENST00000440705 AFAP1Q8N556 730 aa29.7■■■□□ 2.35
VRK2-207ENST00000440705 SPAG9O60271 1321 aaKnown RBP29.7■■■□□ 2.35
VRK2-207ENST00000440705 RTEL1-TNFRSF6BF6WH68 1400 aa29.7■■■□□ 2.35
VRK2-207ENST00000440705 TRIM52Q96A61 297 aa29.69■■■□□ 2.34
VRK2-207ENST00000440705 DNAJC5Q9H3Z4 198 aa29.66■■■□□ 2.34
VRK2-207ENST00000440705 ZNF518AQ6AHZ1 1483 aa29.65■■■□□ 2.34
VRK2-207ENST00000440705 ZFYVE16Q7Z3T8 1539 aa29.62■■■□□ 2.33
VRK2-207ENST00000440705 DUOX2Q9NRD8 1548 aa29.61■■■□□ 2.33
VRK2-207ENST00000440705 KIF13AQ9H1H9 1805 aa29.6■■■□□ 2.33
VRK2-207ENST00000440705 POGZQ7Z3K3 1410 aa29.6■■■□□ 2.33
VRK2-207ENST00000440705 INO80Q9ULG1 1556 aaPredicted RBP29.6■■■□□ 2.33
VRK2-207ENST00000440705 ATP7AQ04656 1500 aa29.59■■■□□ 2.33
VRK2-207ENST00000440705 TEX14Q8IWB6 1497 aa29.59■■■□□ 2.33
VRK2-207ENST00000440705 DENND4BO75064 1496 aaPredicted RBP29.57■■■□□ 2.32
VRK2-207ENST00000440705 MPHOSPH9Q99550 1183 aa29.56■■■□□ 2.32
VRK2-207ENST00000440705 TSPOAP1O95153 1857 aa29.56■■■□□ 2.32
VRK2-207ENST00000440705 KDM5CP41229 1560 aa29.55■■■□□ 2.32
VRK2-207ENST00000440705 ERBINQ96RT1 1412 aa29.54■■■□□ 2.32
VRK2-207ENST00000440705 MYT1LQ9UL68 1186 aa29.54■■■□□ 2.32
VRK2-207ENST00000440705 PPRC1Q5VV67 1664 aaKnown RBP29.54■■■□□ 2.32
VRK2-207ENST00000440705 MLH3Q9UHC1 1453 aa29.5■■■□□ 2.31
VRK2-207ENST00000440705 SLC4A1APQ9BWU0 796 aaKnown RBP29.5■■■□□ 2.31
VRK2-207ENST00000440705 KIDINS220Q9ULH0 1771 aa29.49■■■□□ 2.31
VRK2-207ENST00000440705 NUP155O75694 1391 aa29.48■■■□□ 2.31
VRK2-207ENST00000440705 KDM5DQ9BY66 1539 aa29.47■■■□□ 2.31
VRK2-207ENST00000440705 PZPP20742 1482 aa29.47■■■□□ 2.31
VRK2-207ENST00000440705 HECW2Q9P2P5 1572 aa29.47■■■□□ 2.31
VRK2-207ENST00000440705 RICTORQ6R327 1708 aa29.46■■■□□ 2.31
VRK2-207ENST00000440705 RAPGEF3O95398 923 aa29.46■■■□□ 2.31
VRK2-207ENST00000440705 UNC13BO14795 1591 aa29.44■■■□□ 2.3
VRK2-207ENST00000440705 DHX29Q7Z478 1369 aaKnown RBP29.43■■■□□ 2.3
VRK2-207ENST00000440705 SIN3AQ96ST3 1273 aa29.4■■■□□ 2.3
VRK2-207ENST00000440705 NEUROD1Q13562 356 aa29.37■■■□□ 2.29
VRK2-207ENST00000440705 EIF2AK4Q9P2K8 1649 aaKnown RBP29.37■■■□□ 2.29
VRK2-207ENST00000440705 TIMELESSQ9UNS1 1208 aa29.37■■■□□ 2.29
VRK2-207ENST00000440705 MAGI2Q86UL8 1455 aa29.36■■■□□ 2.29
VRK2-207ENST00000440705 FRMPD1Q5SYB0 1578 aa29.36■■■□□ 2.29
VRK2-207ENST00000440705 A2MP01023 1474 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms