RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 NCOA2Q15596 1464 aa28.52■■■□□ 2.16
PTX4-202ENST00000440447 COL17A1Q9UMD9 1497 aaPredicted RBP28.52■■■□□ 2.16
PTX4-202ENST00000440447 SUPT6HQ7KZ85 1726 aaKnown RBP28.52■■■□□ 2.16
PTX4-202ENST00000440447 GPATCH8Q9UKJ3 1502 aaKnown RBP28.51■■■□□ 2.15
PTX4-202ENST00000440447 PREX2Q70Z35 1606 aa28.48■■■□□ 2.15
PTX4-202ENST00000440447 CFDP1Q9UEE9 299 aaPredicted RBP28.47■■■□□ 2.15
PTX4-202ENST00000440447 CDC42BPAQ5VT25 1732 aa28.46■■■□□ 2.15
PTX4-202ENST00000440447 CDC42BPBQ9Y5S2 1711 aa28.45■■■□□ 2.14
PTX4-202ENST00000440447 ZNF777Q9ULD5 760 aaPredicted RBP28.44■■■□□ 2.14
PTX4-202ENST00000440447 ADGRL1O94910 1474 aa28.44■■■□□ 2.14
PTX4-202ENST00000440447 DENND4BO75064 1496 aaPredicted RBP28.42■■■□□ 2.14
PTX4-202ENST00000440447 RAPGEF3O95398 923 aa28.42■■■□□ 2.14
PTX4-202ENST00000440447 SCAPERQ9BY12 1400 aa28.42■■■□□ 2.14
PTX4-202ENST00000440447 ITSN2Q9NZM3 1697 aa28.38■■■□□ 2.13
PTX4-202ENST00000440447 MYOM3Q5VTT5 1437 aa28.32■■■□□ 2.12
PTX4-202ENST00000440447 POGZQ7Z3K3 1410 aa28.32■■■□□ 2.12
PTX4-202ENST00000440447 PLEKHH2Q8IVE3 1493 aa28.32■■■□□ 2.12
PTX4-202ENST00000440447 ABCC1P33527 1531 aa28.32■■■□□ 2.12
PTX4-202ENST00000440447 SAMD9LQ8IVG5 1584 aa28.32■■■□□ 2.12
PTX4-202ENST00000440447 ZNF644Q9H582 1327 aaPredicted RBP28.3■■■□□ 2.12
PTX4-202ENST00000440447 PPARGC1BQ86YN6 1023 aaKnown RBP28.29■■■□□ 2.12
PTX4-202ENST00000440447 FRMPD1Q5SYB0 1578 aa28.28■■■□□ 2.12
PTX4-202ENST00000440447 KIAA1107Q9UPP5 1409 aa28.28■■■□□ 2.12
PTX4-202ENST00000440447 HNRNPMP52272 730 aaKnown RBP eCLIP28.28■■■□□ 2.12
PTX4-202ENST00000440447 ARHGEF12Q9NZN5 1544 aa28.28■■■□□ 2.12
PTX4-202ENST00000440447 MIA2Q96PC5 1412 aa28.27■■■□□ 2.12
PTX4-202ENST00000440447 RICTORQ6R327 1708 aa28.27■■■□□ 2.12
PTX4-202ENST00000440447 AFAP1Q8N556 730 aa28.27■■■□□ 2.12
PTX4-202ENST00000440447 ZNF518AQ6AHZ1 1483 aa28.27■■■□□ 2.12
PTX4-202ENST00000440447 TRAPPC8Q9Y2L5 1435 aa28.25■■■□□ 2.11
PTX4-202ENST00000440447 SYCP2Q9BX26 1530 aa28.24■■■□□ 2.11
PTX4-202ENST00000440447 CAMSAP2Q08AD1 1489 aa28.22■■■□□ 2.11
PTX4-202ENST00000440447 ZMYM4Q5VZL5 1548 aa28.21■■■□□ 2.11
PTX4-202ENST00000440447 MYT1LQ9UL68 1186 aa28.2■■■□□ 2.1
PTX4-202ENST00000440447 MAGI2Q86UL8 1455 aa28.2■■■□□ 2.1
PTX4-202ENST00000440447 FGD6Q6ZV73 1430 aa28.18■■■□□ 2.1
PTX4-202ENST00000440447 KDM5CP41229 1560 aa28.17■■■□□ 2.1
PTX4-202ENST00000440447 MBD5Q9P267 1494 aa28.17■■■□□ 2.1
PTX4-202ENST00000440447 RSPH4AQ5TD94 716 aa28.17■■■□□ 2.1
PTX4-202ENST00000440447 SPAG9O60271 1321 aaKnown RBP28.14■■■□□ 2.09
PTX4-202ENST00000440447 ZFYVE16Q7Z3T8 1539 aa28.13■■■□□ 2.09
PTX4-202ENST00000440447 MLH3Q9UHC1 1453 aa28.13■■■□□ 2.09
PTX4-202ENST00000440447 YEATS2Q9ULM3 1422 aa28.12■■■□□ 2.09
PTX4-202ENST00000440447 PTPN23Q9H3S7 1636 aa28.11■■■□□ 2.09
PTX4-202ENST00000440447 CCDC141Q6ZP82 1450 aa28.1■■■□□ 2.09
PTX4-202ENST00000440447 ARHGEF40Q8TER5 1519 aa28.1■■■□□ 2.09
PTX4-202ENST00000440447 HECW2Q9P2P5 1572 aa28.1■■■□□ 2.09
PTX4-202ENST00000440447 TCOF1Q13428 1488 aaKnown RBP28.08■■■□□ 2.09
PTX4-202ENST00000440447 ARHGEF5Q12774 1597 aa28.07■■■□□ 2.08
PTX4-202ENST00000440447 TSPY4P0CV99 314 aa28.07■■■□□ 2.08
PTX4-202ENST00000440447 TSPY10P0CW01 314 aa28.07■■■□□ 2.08
PTX4-202ENST00000440447 FAM50AQ14320 339 aaKnown RBP28.06■■■□□ 2.08
PTX4-202ENST00000440447 ATP10AO60312 1499 aa28.04■■■□□ 2.08
PTX4-202ENST00000440447 ATP7AQ04656 1500 aa28.02■■■□□ 2.08
PTX4-202ENST00000440447 RTEL1-TNFRSF6BF6WH68 1400 aa28.01■■■□□ 2.08
PTX4-202ENST00000440447 ARID4BQ4LE39 1312 aaPredicted RBP28■■■□□ 2.07
PTX4-202ENST00000440447 KIDINS220Q9ULH0 1771 aa28■■■□□ 2.07
PTX4-202ENST00000440447 C9orf84Q5VXU9 1444 aa28■■■□□ 2.07
PTX4-202ENST00000440447 DIP2CQ9Y2E4 1556 aa27.99■■■□□ 2.07
PTX4-202ENST00000440447 INO80Q9ULG1 1556 aaPredicted RBP27.99■■■□□ 2.07
PTX4-202ENST00000440447 ABCA6Q8N139 1617 aa27.97■■■□□ 2.07
PTX4-202ENST00000440447 ABCC5O15440 1437 aa27.97■■■□□ 2.07
PTX4-202ENST00000440447 DAPK1P53355 1430 aa27.95■■■□□ 2.07
PTX4-202ENST00000440447 DNMT1P26358 1616 aaKnown RBP27.92■■■□□ 2.06
PTX4-202ENST00000440447 MAST1Q9Y2H9 1570 aa27.91■■■□□ 2.06
PTX4-202ENST00000440447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.91■■■□□ 2.06
PTX4-202ENST00000440447 RRBP1Q9P2E9 1410 aaKnown RBP27.91■■■□□ 2.06
PTX4-202ENST00000440447 REREQ9P2R6 1566 aa27.9■■■□□ 2.06
PTX4-202ENST00000440447 SHANK2Q9UPX8 1470 aa27.9■■■□□ 2.06
PTX4-202ENST00000440447 A2MP01023 1474 aa27.89■■■□□ 2.05
PTX4-202ENST00000440447 CHIC2Q9UKJ5 165 aa27.87■■■□□ 2.05
PTX4-202ENST00000440447 KDM4FA0A1W2PPD8 638 aa27.86■■■□□ 2.05
PTX4-202ENST00000440447 CROCC2H7BZ55 1655 aa27.85■■■□□ 2.05
PTX4-202ENST00000440447 MLECQ14165 292 aa27.85■■■□□ 2.05
PTX4-202ENST00000440447 DHX29Q7Z478 1369 aaKnown RBP27.85■■■□□ 2.05
PTX4-202ENST00000440447 ADGBQ8N7X0 1667 aa27.84■■■□□ 2.05
PTX4-202ENST00000440447 SIGLEC1Q9BZZ2 1709 aa27.84■■■□□ 2.05
PTX4-202ENST00000440447 AGLP35573 1532 aa27.83■■■□□ 2.05
PTX4-202ENST00000440447 ITGAEP38570 1179 aa27.82■■■□□ 2.04
PTX4-202ENST00000440447 ANKRD30AQ9BXX3 1397 aa27.81■■■□□ 2.04
PTX4-202ENST00000440447 RRP7BPQ9NSQ0 103 aa27.8■■■□□ 2.04
PTX4-202ENST00000440447 PLXNC1O60486 1568 aa27.8■■■□□ 2.04
PTX4-202ENST00000440447 BCORL1Q5H9F3 1711 aa27.79■■■□□ 2.04
PTX4-202ENST00000440447 KIF15Q9NS87 1388 aa27.78■■■□□ 2.04
PTX4-202ENST00000440447 PTPRKQ15262 1439 aa27.77■■■□□ 2.04
PTX4-202ENST00000440447 NCOA1Q15788 1441 aa27.76■■■□□ 2.04
PTX4-202ENST00000440447 ADGRL2O95490 1459 aa27.76■■■□□ 2.03
PTX4-202ENST00000440447 DUOX2Q9NRD8 1548 aa27.74■■■□□ 2.03
PTX4-202ENST00000440447 KIF3BO15066 747 aa27.74■■■□□ 2.03
PTX4-202ENST00000440447 ADAMTSL3P82987 1691 aa27.73■■■□□ 2.03
PTX4-202ENST00000440447 GGT6Q6P531 493 aa27.71■■■□□ 2.03
PTX4-202ENST00000440447 ROCK1Q13464 1354 aa27.7■■■□□ 2.02
PTX4-202ENST00000440447 ESF1Q9H501 851 aaKnown RBP27.69■■■□□ 2.02
PTX4-202ENST00000440447 MADDQ8WXG6 1647 aa27.67■■■□□ 2.02
PTX4-202ENST00000440447 AEBP2Q6ZN18 517 aaPredicted RBP27.67■■■□□ 2.02
PTX4-202ENST00000440447 ERBINQ96RT1 1412 aa27.67■■■□□ 2.02
PTX4-202ENST00000440447 PPP6R1Q9UPN7 881 aa27.65■■■□□ 2.02
PTX4-202ENST00000440447 EIF2AK4Q9P2K8 1649 aaKnown RBP27.62■■■□□ 2.01
PTX4-202ENST00000440447 ANKRD50Q9ULJ7 1429 aa27.6■■■□□ 2.01
PTX4-202ENST00000440447 PTPRMP28827 1452 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms