RNA–Protein interactions for RNA: ENST00000439372.5

ATP6AP1-204, Transcript of ATPase H+ transporting accessory protein 1, humanhuman

TSL 4

Gene ATP6AP1, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1-204ENST00000439372 ARHGAP5Q13017 1502 aa36.13■■■■□ 3.37
ATP6AP1-204ENST00000439372 NCOA2Q15596 1464 aa36.12■■■■□ 3.37
ATP6AP1-204ENST00000439372 GPATCH8Q9UKJ3 1502 aaKnown RBP36.11■■■■□ 3.37
ATP6AP1-204ENST00000439372 AKNAQ7Z591 1439 aa36.09■■■■□ 3.37
ATP6AP1-204ENST00000439372 PHLDB1Q86UU1 1377 aa36.08■■■■□ 3.37
ATP6AP1-204ENST00000439372 CCNB3Q8WWL7 1395 aa36.08■■■■□ 3.37
ATP6AP1-204ENST00000439372 EFCAB2Q5VUJ9 269 aa36.05■■■■□ 3.36
ATP6AP1-204ENST00000439372 ITSN2Q9NZM3 1697 aa36.04■■■■□ 3.36
ATP6AP1-204ENST00000439372 ADGRL1O94910 1474 aa35.99■■■■□ 3.35
ATP6AP1-204ENST00000439372 FRMPD1Q5SYB0 1578 aa35.98■■■■□ 3.35
ATP6AP1-204ENST00000439372 SAMD9LQ8IVG5 1584 aa35.96■■■■□ 3.35
ATP6AP1-204ENST00000439372 RICTORQ6R327 1708 aa35.96■■■■□ 3.35
ATP6AP1-204ENST00000439372 DENND4BO75064 1496 aaPredicted RBP35.93■■■■□ 3.34
ATP6AP1-204ENST00000439372 SCAPERQ9BY12 1400 aa35.93■■■■□ 3.34
ATP6AP1-204ENST00000439372 CFDP1Q9UEE9 299 aaPredicted RBP35.93■■■■□ 3.34
ATP6AP1-204ENST00000439372 ABCC1P33527 1531 aa35.93■■■■□ 3.34
ATP6AP1-204ENST00000439372 RAPGEF3O95398 923 aa35.92■■■■□ 3.34
ATP6AP1-204ENST00000439372 ZNF777Q9ULD5 760 aaPredicted RBP35.91■■■■□ 3.34
ATP6AP1-204ENST00000439372 ARHGEF12Q9NZN5 1544 aa35.88■■■■□ 3.33
ATP6AP1-204ENST00000439372 POGZQ7Z3K3 1410 aa35.85■■■■□ 3.33
ATP6AP1-204ENST00000439372 MYOM3Q5VTT5 1437 aa35.84■■■■□ 3.33
ATP6AP1-204ENST00000439372 SYCP2Q9BX26 1530 aa35.83■■■■□ 3.33
ATP6AP1-204ENST00000439372 PPARGC1BQ86YN6 1023 aaKnown RBP35.83■■■■□ 3.33
ATP6AP1-204ENST00000439372 ZNF644Q9H582 1327 aaPredicted RBP35.83■■■■□ 3.33
ATP6AP1-204ENST00000439372 TRAPPC8Q9Y2L5 1435 aa35.78■■■■□ 3.32
ATP6AP1-204ENST00000439372 CAMSAP2Q08AD1 1489 aa35.78■■■■□ 3.32
ATP6AP1-204ENST00000439372 PLEKHH2Q8IVE3 1493 aa35.78■■■■□ 3.32
ATP6AP1-204ENST00000439372 ZMYM4Q5VZL5 1548 aa35.78■■■■□ 3.32
ATP6AP1-204ENST00000439372 KIAA1107Q9UPP5 1409 aa35.75■■■■□ 3.31
ATP6AP1-204ENST00000439372 ZNF518AQ6AHZ1 1483 aa35.75■■■■□ 3.31
ATP6AP1-204ENST00000439372 KDM5CP41229 1560 aa35.74■■■■□ 3.31
ATP6AP1-204ENST00000439372 HNRNPMP52272 730 aaKnown RBP eCLIP35.74■■■■□ 3.31
ATP6AP1-204ENST00000439372 AFAP1Q8N556 730 aa35.74■■■■□ 3.31
ATP6AP1-204ENST00000439372 MIA2Q96PC5 1412 aa35.74■■■■□ 3.31
ATP6AP1-204ENST00000439372 PTPN23Q9H3S7 1636 aa35.68■■■■□ 3.3
ATP6AP1-204ENST00000439372 MBD5Q9P267 1494 aa35.68■■■■□ 3.3
ATP6AP1-204ENST00000439372 FGD6Q6ZV73 1430 aa35.68■■■■□ 3.3
ATP6AP1-204ENST00000439372 ARHGEF40Q8TER5 1519 aa35.66■■■■□ 3.3
ATP6AP1-204ENST00000439372 HECW2Q9P2P5 1572 aa35.65■■■■□ 3.3
ATP6AP1-204ENST00000439372 ZFYVE16Q7Z3T8 1539 aa35.65■■■■□ 3.3
ATP6AP1-204ENST00000439372 YEATS2Q9ULM3 1422 aa35.64■■■■□ 3.3
ATP6AP1-204ENST00000439372 MAGI2Q86UL8 1455 aa35.62■■■■□ 3.29
ATP6AP1-204ENST00000439372 ARHGEF5Q12774 1597 aa35.6■■■■□ 3.29
ATP6AP1-204ENST00000439372 KIDINS220Q9ULH0 1771 aa35.6■■■■□ 3.29
ATP6AP1-204ENST00000439372 TCOF1Q13428 1488 aaKnown RBP35.6■■■■□ 3.29
ATP6AP1-204ENST00000439372 MLH3Q9UHC1 1453 aa35.59■■■■□ 3.29
ATP6AP1-204ENST00000439372 CCDC141Q6ZP82 1450 aa35.56■■■■□ 3.28
ATP6AP1-204ENST00000439372 INO80Q9ULG1 1556 aaPredicted RBP35.55■■■■□ 3.28
ATP6AP1-204ENST00000439372 ABCA6Q8N139 1617 aa35.55■■■■□ 3.28
ATP6AP1-204ENST00000439372 MYT1LQ9UL68 1186 aa35.53■■■■□ 3.28
ATP6AP1-204ENST00000439372 DIP2CQ9Y2E4 1556 aa35.53■■■■□ 3.28
ATP6AP1-204ENST00000439372 SPAG9O60271 1321 aaKnown RBP35.53■■■■□ 3.28
ATP6AP1-204ENST00000439372 ATP7AQ04656 1500 aa35.52■■■■□ 3.28
ATP6AP1-204ENST00000439372 SIGLEC1Q9BZZ2 1709 aa35.5■■■■□ 3.27
ATP6AP1-204ENST00000439372 RSPH4AQ5TD94 716 aa35.47■■■■□ 3.27
ATP6AP1-204ENST00000439372 ATP10AO60312 1499 aa35.47■■■■□ 3.27
ATP6AP1-204ENST00000439372 CROCC2H7BZ55 1655 aa35.46■■■■□ 3.27
ATP6AP1-204ENST00000439372 DNMT1P26358 1616 aaKnown RBP35.46■■■■□ 3.27
ATP6AP1-204ENST00000439372 FAM50AQ14320 339 aaKnown RBP35.43■■■■□ 3.26
ATP6AP1-204ENST00000439372 C9orf84Q5VXU9 1444 aa35.42■■■■□ 3.26
ATP6AP1-204ENST00000439372 ABCC5O15440 1437 aa35.41■■■■□ 3.26
ATP6AP1-204ENST00000439372 MAST1Q9Y2H9 1570 aa35.41■■■■□ 3.26
ATP6AP1-204ENST00000439372 RTEL1-TNFRSF6BF6WH68 1400 aa35.4■■■■□ 3.26
ATP6AP1-204ENST00000439372 DAPK1P53355 1430 aa35.4■■■■□ 3.26
ATP6AP1-204ENST00000439372 ADGBQ8N7X0 1667 aa35.37■■■■□ 3.25
ATP6AP1-204ENST00000439372 REREQ9P2R6 1566 aa35.37■■■■□ 3.25
ATP6AP1-204ENST00000439372 TSPY4P0CV99 314 aa35.36■■■■□ 3.25
ATP6AP1-204ENST00000439372 TSPY10P0CW01 314 aa35.36■■■■□ 3.25
ATP6AP1-204ENST00000439372 RRBP1Q9P2E9 1410 aaKnown RBP35.34■■■■□ 3.25
ATP6AP1-204ENST00000439372 SHANK2Q9UPX8 1470 aa35.34■■■■□ 3.25
ATP6AP1-204ENST00000439372 ARID4BQ4LE39 1312 aaPredicted RBP35.32■■■■□ 3.25
ATP6AP1-204ENST00000439372 BCORL1Q5H9F3 1711 aa35.31■■■■□ 3.24
ATP6AP1-204ENST00000439372 A2MP01023 1474 aa35.29■■■■□ 3.24
ATP6AP1-204ENST00000439372 PLXNC1O60486 1568 aa35.28■■■■□ 3.24
ATP6AP1-204ENST00000439372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.26■■■■□ 3.24
ATP6AP1-204ENST00000439372 KDM4FA0A1W2PPD8 638 aa35.25■■■■□ 3.23
ATP6AP1-204ENST00000439372 AGLP35573 1532 aa35.25■■■■□ 3.23
ATP6AP1-204ENST00000439372 CHIC2Q9UKJ5 165 aa35.23■■■■□ 3.23
ATP6AP1-204ENST00000439372 PTPRKQ15262 1439 aa35.23■■■■□ 3.23
ATP6AP1-204ENST00000439372 ADAMTSL3P82987 1691 aa35.22■■■■□ 3.23
ATP6AP1-204ENST00000439372 DHX29Q7Z478 1369 aaKnown RBP35.19■■■■□ 3.22
ATP6AP1-204ENST00000439372 MLECQ14165 292 aa35.18■■■■□ 3.22
ATP6AP1-204ENST00000439372 ADGRL2O95490 1459 aa35.16■■■■□ 3.22
ATP6AP1-204ENST00000439372 MADDQ8WXG6 1647 aa35.15■■■■□ 3.22
ATP6AP1-204ENST00000439372 ITGAEP38570 1179 aa35.15■■■■□ 3.22
ATP6AP1-204ENST00000439372 ANKRD30AQ9BXX3 1397 aa35.13■■■■□ 3.21
ATP6AP1-204ENST00000439372 KIF15Q9NS87 1388 aa35.13■■■■□ 3.21
ATP6AP1-204ENST00000439372 RRP7BPQ9NSQ0 103 aa35.12■■■■□ 3.21
ATP6AP1-204ENST00000439372 NCOA1Q15788 1441 aa35.12■■■■□ 3.21
ATP6AP1-204ENST00000439372 DUOX2Q9NRD8 1548 aa35.11■■■■□ 3.21
ATP6AP1-204ENST00000439372 FER1L4A9Z1Z3 1794 aa35.1■■■■□ 3.21
ATP6AP1-204ENST00000439372 RIMS1Q86UR5 1692 aaKnown RBP35.08■■■■□ 3.21
ATP6AP1-204ENST00000439372 EIF2AK4Q9P2K8 1649 aaKnown RBP35.05■■■■□ 3.2
ATP6AP1-204ENST00000439372 KIF3BO15066 747 aa35.02■■■■□ 3.2
ATP6AP1-204ENST00000439372 ROCK1Q13464 1354 aa35.01■■■■□ 3.2
ATP6AP1-204ENST00000439372 ERBINQ96RT1 1412 aa34.99■■■■□ 3.19
ATP6AP1-204ENST00000439372 RNF17Q9BXT8 1623 aaKnown RBP34.99■■■■□ 3.19
ATP6AP1-204ENST00000439372 GGT6Q6P531 493 aa34.98■■■■□ 3.19
ATP6AP1-204ENST00000439372 PTPRMP28827 1452 aa34.94■■■■□ 3.18
ATP6AP1-204ENST00000439372 MROH1Q8NDA8 1641 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms