RNA–Protein interactions for RNA: ENST00000439372.5

ATP6AP1-204, Transcript of ATPase H+ transporting accessory protein 1, humanhuman

TSL 4

Gene ATP6AP1, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1-204ENST00000439372 NISCHQ9Y2I1 1504 aa55.46■■■■■ 6.47
ATP6AP1-204ENST00000439372 CCDC180Q9P1Z9 1646 aa49.18■■■■■ 5.46
ATP6AP1-204ENST00000439372 ABCC9O60706 1549 aa47.79■■■■■ 5.24
ATP6AP1-204ENST00000439372 ZCCHC6Q5VYS8 1495 aaKnown RBP46.29■■■■■ 5
ATP6AP1-204ENST00000439372 DCAF8L2P0C7V8 631 aa46.16■■■■■ 4.98
ATP6AP1-204ENST00000439372 NACADO15069 1562 aa46.1■■■■■ 4.97
ATP6AP1-204ENST00000439372 RB1CC1Q8TDY2 1594 aa46.08■■■■■ 4.97
ATP6AP1-204ENST00000439372 MYO15BQ96JP2 1530 aa45.9■■■■■ 4.94
ATP6AP1-204ENST00000439372 DCAF1Q9Y4B6 1507 aa45.87■■■■■ 4.93
ATP6AP1-204ENST00000439372 UNC13AQ9UPW8 1703 aa45.2■■■■■ 4.83
ATP6AP1-204ENST00000439372 SCRIBQ14160 1630 aa44.95■■■■■ 4.79
ATP6AP1-204ENST00000439372 BICRAQ9NZM4 1560 aa44.76■■■■■ 4.76
ATP6AP1-204ENST00000439372 PABPN1Q86U42 306 aaKnown RBP eCLIP44.7■■■■■ 4.75
ATP6AP1-204ENST00000439372 SHROOM4Q9ULL8 1493 aa44.17■■■■■ 4.66
ATP6AP1-204ENST00000439372 DNAJC5BQ9UF47 199 aa43.55■■■■■ 4.56
ATP6AP1-204ENST00000439372 EIF4G1Q04637 1599 aaKnown RBP43.5■■■■■ 4.55
ATP6AP1-204ENST00000439372 CC2D2AQ9P2K1 1620 aa43.26■■■■■ 4.52
ATP6AP1-204ENST00000439372 CECR2Q9BXF3 1484 aa43.21■■■■■ 4.51
ATP6AP1-204ENST00000439372 SMARCA4P51532 1647 aa43■■■■■ 4.47
ATP6AP1-204ENST00000439372 BAZ1AQ9NRL2 1556 aaPredicted RBP42.94■■■■■ 4.46
ATP6AP1-204ENST00000439372 MROH2BQ7Z745 1585 aa42.79■■■■■ 4.44
ATP6AP1-204ENST00000439372 ATAD2BQ9ULI0 1458 aa42.63■■■■■ 4.42
ATP6AP1-204ENST00000439372 SMARCA2P51531 1590 aa42.58■■■■■ 4.41
ATP6AP1-204ENST00000439372 PEG3Q9GZU2 1588 aa42.53■■■■■ 4.4
ATP6AP1-204ENST00000439372 NCAPD3P42695 1498 aa42.52■■■■■ 4.4
ATP6AP1-204ENST00000439372 WIZO95785 1651 aa42.39■■■■■ 4.38
ATP6AP1-204ENST00000439372 RSF1Q96T23 1441 aaPredicted RBP42.38■■■■■ 4.38
ATP6AP1-204ENST00000439372 HMGXB3Q12766 1538 aa42.38■■■■■ 4.37
ATP6AP1-204ENST00000439372 BAZ1BQ9UIG0 1483 aaKnown RBP42.3■■■■■ 4.36
ATP6AP1-204ENST00000439372 TOP2AP11388 1531 aaKnown RBP41.9■■■■■ 4.3
ATP6AP1-204ENST00000439372 SUPT5HO00267 1087 aaKnown RBP41.57■■■■■ 4.25
ATP6AP1-204ENST00000439372 NESP48681 1621 aa41.49■■■■■ 4.23
ATP6AP1-204ENST00000439372 CCDC88BA6NC98 1476 aa41.4■■■■■ 4.22
ATP6AP1-204ENST00000439372 LAMC3Q9Y6N6 1575 aa41.37■■■■■ 4.21
ATP6AP1-204ENST00000439372 CADPSQ9ULU8 1353 aa41.3■■■■■ 4.2
ATP6AP1-204ENST00000439372 CFTRP13569 1480 aa41.15■■■■■ 4.18
ATP6AP1-204ENST00000439372 ERCC6Q03468 1493 aa41.11■■■■■ 4.17
ATP6AP1-204ENST00000439372 KIF21AQ7Z4S6 1674 aa41.05■■■■■ 4.16
ATP6AP1-204ENST00000439372 PDS5BQ9NTI5 1447 aa41.02■■■■■ 4.16
ATP6AP1-204ENST00000439372 PRDM2Q13029 1718 aa40.98■■■■■ 4.15
ATP6AP1-204ENST00000439372 FANCD2Q9BXW9 1451 aa40.86■■■■■ 4.13
ATP6AP1-204ENST00000439372 THOC2Q8NI27 1593 aaKnown RBP40.79■■■■■ 4.12
ATP6AP1-204ENST00000439372 CEP164Q9UPV0 1460 aa40.77■■■■■ 4.12
ATP6AP1-204ENST00000439372 MRC2Q9UBG0 1479 aa40.64■■■■■ 4.1
ATP6AP1-204ENST00000439372 CUX2O14529 1486 aa40.53■■■■■ 4.08
ATP6AP1-204ENST00000439372 WDR62O43379 1518 aa40.51■■■■■ 4.08
ATP6AP1-204ENST00000439372 URB2Q14146 1524 aaKnown RBP40.47■■■■■ 4.07
ATP6AP1-204ENST00000439372 TOPBP1Q92547 1522 aa40.26■■■■■ 4.04
ATP6AP1-204ENST00000439372 DNMBPQ6XZF7 1577 aa40.26■■■■■ 4.04
ATP6AP1-204ENST00000439372 ABCC8Q09428 1581 aa40.19■■■■■ 4.02
ATP6AP1-204ENST00000439372 CUX1P39880 1505 aa40.12■■■■■ 4.01
ATP6AP1-204ENST00000439372 WRNQ14191 1432 aaPredicted RBP eCLIP39.94■■■■□ 3.98
ATP6AP1-204ENST00000439372 POLA1P09884 1462 aaPredicted RBP39.94■■■■□ 3.98
ATP6AP1-204ENST00000439372 FGD5Q6ZNL6 1462 aa39.91■■■■□ 3.98
ATP6AP1-204ENST00000439372 SYNJ1O43426 1573 aa39.9■■■■□ 3.98
ATP6AP1-204ENST00000439372 IFT140Q96RY7 1462 aa39.88■■■■□ 3.98
ATP6AP1-204ENST00000439372 BIVM-ERCC5R4GMW8 1640 aa39.87■■■■□ 3.97
ATP6AP1-204ENST00000439372 TOP2BQ02880 1626 aa39.85■■■■□ 3.97
ATP6AP1-204ENST00000439372 TARBP1Q13395 1621 aaKnown RBP39.83■■■■□ 3.97
ATP6AP1-204ENST00000439372 RAD54L2Q9Y4B4 1467 aa39.79■■■■□ 3.96
ATP6AP1-204ENST00000439372 SOGA1O94964 1423 aa39.75■■■■□ 3.95
ATP6AP1-204ENST00000439372 ZNF608Q9ULD9 1512 aaPredicted RBP39.75■■■■□ 3.95
ATP6AP1-204ENST00000439372 WDR97A6NE52 1622 aa39.63■■■■□ 3.93
ATP6AP1-204ENST00000439372 EIF4G3O43432 1585 aaKnown RBP39.62■■■■□ 3.93
ATP6AP1-204ENST00000439372 AQRO60306 1485 aaKnown RBP eCLIP39.54■■■■□ 3.924e-8■■□□□ 13.7
ATP6AP1-204ENST00000439372 ABCA10Q8WWZ4 1543 aa39.51■■■■□ 3.92
ATP6AP1-204ENST00000439372 TDRD9Q8NDG6 1382 aaKnown RBP39.51■■■■□ 3.92
ATP6AP1-204ENST00000439372 ABCA5Q8WWZ7 1642 aa39.37■■■■□ 3.89
ATP6AP1-204ENST00000439372 GAPVD1Q14C86 1478 aa39.31■■■■□ 3.88
ATP6AP1-204ENST00000439372 PBRM1Q86U86 1689 aa39.31■■■■□ 3.88
ATP6AP1-204ENST00000439372 GRIN2BQ13224 1484 aa39.24■■■■□ 3.87
ATP6AP1-204ENST00000439372 SNAPC4Q5SXM2 1469 aa39.19■■■■□ 3.86
ATP6AP1-204ENST00000439372 TRIM41Q8WV44 630 aa39.19■■■■□ 3.86
ATP6AP1-204ENST00000439372 MAGI1Q96QZ7 1491 aaPredicted RBP39.11■■■■□ 3.85
ATP6AP1-204ENST00000439372 CHD1O14646 1710 aa39.1■■■■□ 3.85
ATP6AP1-204ENST00000439372 KIF27Q86VH2 1401 aa39.05■■■■□ 3.84
ATP6AP1-204ENST00000439372 ERICH3Q5RHP9 1530 aa39.04■■■■□ 3.84
ATP6AP1-204ENST00000439372 CHIC1Q5VXU3 224 aa39.01■■■■□ 3.84
ATP6AP1-204ENST00000439372 ADAMTS12P58397 1594 aa38.98■■■■□ 3.83
ATP6AP1-204ENST00000439372 SYNJ2O15056 1496 aa38.95■■■■□ 3.83
ATP6AP1-204ENST00000439372 FBLN2P98095 1184 aa38.95■■■■□ 3.83
ATP6AP1-204ENST00000439372 RUSC2Q8N2Y8 1516 aa38.91■■■■□ 3.82
ATP6AP1-204ENST00000439372 OSCARQ8IYS5 282 aa38.89■■■■□ 3.82
ATP6AP1-204ENST00000439372 CHMP7Q8WUX9 453 aaPredicted RBP38.87■■■■□ 3.81
ATP6AP1-204ENST00000439372 DNAJC5Q9H3Z4 198 aa38.87■■■■□ 3.81
ATP6AP1-204ENST00000439372 IGF1RP08069 1367 aa38.86■■■■□ 3.81
ATP6AP1-204ENST00000439372 FHAD1B1AJZ9 1412 aa38.85■■■■□ 3.81
ATP6AP1-204ENST00000439372 CUL7Q14999 1698 aa38.78■■■■□ 3.8
ATP6AP1-204ENST00000439372 GRIN2AQ12879 1464 aa38.76■■■■□ 3.8
ATP6AP1-204ENST00000439372 CARMIL1Q5VZK9 1371 aa38.64■■■■□ 3.78
ATP6AP1-204ENST00000439372 CLASP1Q7Z460 1538 aa38.62■■■■□ 3.77
ATP6AP1-204ENST00000439372 CEP170Q5SW79 1584 aa38.61■■■■□ 3.77
ATP6AP1-204ENST00000439372 NUP160Q12769 1436 aa38.57■■■■□ 3.77
ATP6AP1-204ENST00000439372 EEA1Q15075 1411 aa38.51■■■■□ 3.76
ATP6AP1-204ENST00000439372 RAPGEF2Q9Y4G8 1499 aa38.46■■■■□ 3.75
ATP6AP1-204ENST00000439372 FAM9AQ8IZU1 332 aaPredicted RBP38.44■■■■□ 3.74
ATP6AP1-204ENST00000439372 CSRNP3Q8WYN3 585 aa38.43■■■■□ 3.74
ATP6AP1-204ENST00000439372 PRXQ9BXM0 1461 aa38.42■■■■□ 3.74
ATP6AP1-204ENST00000439372 RIMBP3CA6NJZ7 1639 aa38.35■■■■□ 3.73
ATP6AP1-204ENST00000439372 RIMBP3BA6NNM3 1639 aa38.35■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms