RNA–Protein interactions for RNA: ENST00000438886.1

APEX1-203, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-203ENST00000438886 CDC42BPBQ9Y5S2 1711 aa13.16□□□□□ -0.3
APEX1-203ENST00000438886 FANCAO15360 1455 aa13.16□□□□□ -0.3
APEX1-203ENST00000438886 ARHGAP5Q13017 1502 aa13.15□□□□□ -0.3
APEX1-203ENST00000438886 GPATCH8Q9UKJ3 1502 aaKnown RBP13.15□□□□□ -0.3
APEX1-203ENST00000438886 MYOM3Q5VTT5 1437 aa13.14□□□□□ -0.31
APEX1-203ENST00000438886 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
APEX1-203ENST00000438886 EFCAB2Q5VUJ9 269 aa13.14□□□□□ -0.31
APEX1-203ENST00000438886 PLEKHH2Q8IVE3 1493 aa13.14□□□□□ -0.31
APEX1-203ENST00000438886 CFDP1Q9UEE9 299 aaPredicted RBP13.1□□□□□ -0.31
APEX1-203ENST00000438886 AKNAQ7Z591 1439 aa13.1□□□□□ -0.31
APEX1-203ENST00000438886 ABCC1P33527 1531 aa13.09□□□□□ -0.31
APEX1-203ENST00000438886 FGD6Q6ZV73 1430 aa13.09□□□□□ -0.31
APEX1-203ENST00000438886 KIAA1107Q9UPP5 1409 aa13.09□□□□□ -0.31
APEX1-203ENST00000438886 ADGRL1O94910 1474 aa13.09□□□□□ -0.31
APEX1-203ENST00000438886 SAMD9LQ8IVG5 1584 aa13.08□□□□□ -0.32
APEX1-203ENST00000438886 KDM6BO15054 1643 aa13.07□□□□□ -0.32
APEX1-203ENST00000438886 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
APEX1-203ENST00000438886 DENND4BO75064 1496 aaPredicted RBP13.06□□□□□ -0.32
APEX1-203ENST00000438886 CAMSAP2Q08AD1 1489 aa13.06□□□□□ -0.32
APEX1-203ENST00000438886 TCOF1Q13428 1488 aaKnown RBP13.06□□□□□ -0.32
APEX1-203ENST00000438886 ZNF518AQ6AHZ1 1483 aa13.05□□□□□ -0.32
APEX1-203ENST00000438886 ARHGEF5Q12774 1597 aa13.05□□□□□ -0.32
APEX1-203ENST00000438886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.05□□□□□ -0.32
APEX1-203ENST00000438886 RICTORQ6R327 1708 aa13.05□□□□□ -0.32
APEX1-203ENST00000438886 RSPH4AQ5TD94 716 aa13.04□□□□□ -0.32
APEX1-203ENST00000438886 POGZQ7Z3K3 1410 aa13.04□□□□□ -0.32
APEX1-203ENST00000438886 SCAPERQ9BY12 1400 aa13.04□□□□□ -0.32
APEX1-203ENST00000438886 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
APEX1-203ENST00000438886 SYCP2Q9BX26 1530 aa13.03□□□□□ -0.32
APEX1-203ENST00000438886 RRBP1Q9P2E9 1410 aaKnown RBP13.03□□□□□ -0.32
APEX1-203ENST00000438886 KDM5CP41229 1560 aa13.02□□□□□ -0.33
APEX1-203ENST00000438886 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
APEX1-203ENST00000438886 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
APEX1-203ENST00000438886 MAGI2Q86UL8 1455 aa13.01□□□□□ -0.33
APEX1-203ENST00000438886 FRMPD1Q5SYB0 1578 aa13□□□□□ -0.33
APEX1-203ENST00000438886 MBD5Q9P267 1494 aa13□□□□□ -0.33
APEX1-203ENST00000438886 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
APEX1-203ENST00000438886 SHANK2Q9UPX8 1470 aa12.99□□□□□ -0.33
APEX1-203ENST00000438886 CROCC2H7BZ55 1655 aa12.99□□□□□ -0.33
APEX1-203ENST00000438886 HECW2Q9P2P5 1572 aa12.98□□□□□ -0.33
APEX1-203ENST00000438886 ARHGEF12Q9NZN5 1544 aa12.98□□□□□ -0.33
APEX1-203ENST00000438886 MAST1Q9Y2H9 1570 aa12.98□□□□□ -0.33
APEX1-203ENST00000438886 MLH3Q9UHC1 1453 aa12.97□□□□□ -0.33
APEX1-203ENST00000438886 COL17A1Q9UMD9 1497 aaPredicted RBP12.97□□□□□ -0.33
APEX1-203ENST00000438886 PPARGC1BQ86YN6 1023 aaKnown RBP12.97□□□□□ -0.33
APEX1-203ENST00000438886 RTEL1-TNFRSF6BF6WH68 1400 aa12.96□□□□□ -0.33
APEX1-203ENST00000438886 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.33
APEX1-203ENST00000438886 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.33
APEX1-203ENST00000438886 INO80Q9ULG1 1556 aaPredicted RBP12.96□□□□□ -0.33
APEX1-203ENST00000438886 ARHGEF40Q8TER5 1519 aa12.95□□□□□ -0.34
APEX1-203ENST00000438886 DAPK1P53355 1430 aa12.95□□□□□ -0.34
APEX1-203ENST00000438886 ATP7AQ04656 1500 aa12.94□□□□□ -0.34
APEX1-203ENST00000438886 ZFYVE16Q7Z3T8 1539 aa12.94□□□□□ -0.34
APEX1-203ENST00000438886 TSPY4P0CV99 314 aa12.94□□□□□ -0.34
APEX1-203ENST00000438886 TSPY10P0CW01 314 aa12.94□□□□□ -0.34
APEX1-203ENST00000438886 HNRNPMP52272 730 aaKnown RBP eCLIP12.94□□□□□ -0.34
APEX1-203ENST00000438886 FAM50AQ14320 339 aaKnown RBP12.94□□□□□ -0.34
APEX1-203ENST00000438886 PLXNC1O60486 1568 aa12.94□□□□□ -0.34
APEX1-203ENST00000438886 SPAG9O60271 1321 aaKnown RBP12.93□□□□□ -0.34
APEX1-203ENST00000438886 RAPGEF3O95398 923 aa12.93□□□□□ -0.34
APEX1-203ENST00000438886 KIDINS220Q9ULH0 1771 aa12.93□□□□□ -0.34
APEX1-203ENST00000438886 ABCC5O15440 1437 aa12.93□□□□□ -0.34
APEX1-203ENST00000438886 ADGBQ8N7X0 1667 aa12.93□□□□□ -0.34
APEX1-203ENST00000438886 C9orf84Q5VXU9 1444 aa12.92□□□□□ -0.34
APEX1-203ENST00000438886 REREQ9P2R6 1566 aa12.92□□□□□ -0.34
APEX1-203ENST00000438886 ADGRL2O95490 1459 aa12.91□□□□□ -0.34
APEX1-203ENST00000438886 AFAP1Q8N556 730 aa12.91□□□□□ -0.34
APEX1-203ENST00000438886 ABCA6Q8N139 1617 aa12.89□□□□□ -0.35
APEX1-203ENST00000438886 ROCK1Q13464 1354 aa12.89□□□□□ -0.35
APEX1-203ENST00000438886 ANKRD30AQ9BXX3 1397 aa12.89□□□□□ -0.35
APEX1-203ENST00000438886 DIP2CQ9Y2E4 1556 aa12.89□□□□□ -0.35
APEX1-203ENST00000438886 ATP10AO60312 1499 aa12.88□□□□□ -0.35
APEX1-203ENST00000438886 MYT1LQ9UL68 1186 aa12.87□□□□□ -0.35
APEX1-203ENST00000438886 DUOX2Q9NRD8 1548 aa12.86□□□□□ -0.35
APEX1-203ENST00000438886 YEATS2Q9ULM3 1422 aa12.86□□□□□ -0.35
APEX1-203ENST00000438886 EIF2AK4Q9P2K8 1649 aaKnown RBP12.85□□□□□ -0.35
APEX1-203ENST00000438886 AGLP35573 1532 aa12.85□□□□□ -0.35
APEX1-203ENST00000438886 NCOA1Q15788 1441 aa12.85□□□□□ -0.35
APEX1-203ENST00000438886 BCORL1Q5H9F3 1711 aa12.85□□□□□ -0.35
APEX1-203ENST00000438886 A2MP01023 1474 aa12.85□□□□□ -0.35
APEX1-203ENST00000438886 ERBINQ96RT1 1412 aa12.84□□□□□ -0.35
APEX1-203ENST00000438886 KIF15Q9NS87 1388 aa12.83□□□□□ -0.36
APEX1-203ENST00000438886 DHX29Q7Z478 1369 aaKnown RBP12.82□□□□□ -0.36
APEX1-203ENST00000438886 PTPRKQ15262 1439 aa12.82□□□□□ -0.36
APEX1-203ENST00000438886 GCC2Q8IWJ2 1684 aa12.82□□□□□ -0.36
APEX1-203ENST00000438886 FAM135AQ9P2D6 1515 aa12.81□□□□□ -0.36
APEX1-203ENST00000438886 ACIN1Q9UKV3 1341 aaKnown RBP12.81□□□□□ -0.36
APEX1-203ENST00000438886 HFM1A2PYH4 1435 aa12.8□□□□□ -0.36
APEX1-203ENST00000438886 TRIM26Q12899 539 aaPredicted RBP12.79□□□□□ -0.36
APEX1-203ENST00000438886 RNF17Q9BXT8 1623 aaKnown RBP12.78□□□□□ -0.36
APEX1-203ENST00000438886 ITGAEP38570 1179 aa12.78□□□□□ -0.36
APEX1-203ENST00000438886 CHIC2Q9UKJ5 165 aa12.78□□□□□ -0.36
APEX1-203ENST00000438886 ANKRD50Q9ULJ7 1429 aa12.78□□□□□ -0.36
APEX1-203ENST00000438886 PPP6R1Q9UPN7 881 aa12.77□□□□□ -0.37
APEX1-203ENST00000438886 RRP7BPQ9NSQ0 103 aa12.76□□□□□ -0.37
APEX1-203ENST00000438886 NAIPQ13075 1403 aa12.76□□□□□ -0.37
APEX1-203ENST00000438886 DEPDC5O75140 1603 aa12.76□□□□□ -0.37
APEX1-203ENST00000438886 SIGLEC1Q9BZZ2 1709 aa12.74□□□□□ -0.37
APEX1-203ENST00000438886 ZC3H13Q5T200 1668 aaKnown RBP12.74□□□□□ -0.37
APEX1-203ENST00000438886 PRDM15P57071 1507 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms