RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 METRNQ9UJH8 293 aa8.91□□□□□ -0.98
LSM1P1-201ENST00000438629 NCKAP5LQ9HCH0 1330 aa8.89□□□□□ -0.99
LSM1P1-201ENST00000438629 MFSD10Q14728 455 aa8.89□□□□□ -0.99
LSM1P1-201ENST00000438629 E2F4Q16254 413 aa8.89□□□□□ -0.99
LSM1P1-201ENST00000438629 DDX27Q96GQ7 796 aaKnown RBP8.89□□□□□ -0.99
LSM1P1-201ENST00000438629 COLQQ9Y215 455 aaPredicted RBP8.89□□□□□ -0.99
LSM1P1-201ENST00000438629 TMC2Q8TDI7 906 aa8.88□□□□□ -0.99
LSM1P1-201ENST00000438629 GPHNQ9NQX3 736 aaPredicted RBP8.88□□□□□ -0.99
LSM1P1-201ENST00000438629 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
LSM1P1-201ENST00000438629 POTEFA5A3E0 1075 aa8.83□□□□□ -1
LSM1P1-201ENST00000438629 PPP1R15BQ5SWA1 713 aa8.82□□□□□ -1
LSM1P1-201ENST00000438629 C3orf67Q6ZVT6 689 aa8.82□□□□□ -1
LSM1P1-201ENST00000438629 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
LSM1P1-201ENST00000438629 FOXK1P85037 733 aa8.81□□□□□ -1
LSM1P1-201ENST00000438629 CAMK2BQ13554 666 aa8.79□□□□□ -1
LSM1P1-201ENST00000438629 ARIH1Q9Y4X5 557 aaPredicted RBP8.79□□□□□ -1
LSM1P1-201ENST00000438629 C2orf72A6NCS6 295 aa8.78□□□□□ -1
LSM1P1-201ENST00000438629 KIF3CO14782 793 aa8.78□□□□□ -1
LSM1P1-201ENST00000438629 DSG2Q14126 1118 aa8.78□□□□□ -1
LSM1P1-201ENST00000438629 PLPP6Q8IY26 295 aa8.77□□□□□ -1.01
LSM1P1-201ENST00000438629 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.77□□□□□ -1.01
LSM1P1-201ENST00000438629 TULP1O00294 542 aaPredicted RBP8.76□□□□□ -1.01
LSM1P1-201ENST00000438629 MAMSTRQ6ZN01 415 aa8.73□□□□□ -1.01
LSM1P1-201ENST00000438629 SPDYE16A6NNV3 312 aaPredicted RBP8.71□□□□□ -1.02
LSM1P1-201ENST00000438629 SMYD5Q6GMV2 418 aa8.71□□□□□ -1.02
LSM1P1-201ENST00000438629 TMEM92Q6UXU6 159 aa8.71□□□□□ -1.02
LSM1P1-201ENST00000438629 MAP3K9P80192 1104 aa8.69□□□□□ -1.02
LSM1P1-201ENST00000438629 SCUBE2Q9NQ36 999 aa8.69□□□□□ -1.02
LSM1P1-201ENST00000438629 TBC1D12O60347 775 aa8.68□□□□□ -1.02
LSM1P1-201ENST00000438629 EMILIN3Q9NT22 766 aa8.67□□□□□ -1.02
LSM1P1-201ENST00000438629 TESPA1A2RU30 521 aaPredicted RBP8.66□□□□□ -1.02
LSM1P1-201ENST00000438629 DPYSL4O14531 572 aa8.66□□□□□ -1.02
LSM1P1-201ENST00000438629 SEMA3EO15041 775 aa8.65□□□□□ -1.02
LSM1P1-201ENST00000438629 SLC34A2O95436 690 aa8.65□□□□□ -1.02
LSM1P1-201ENST00000438629 OXER1Q8TDS5 423 aa8.64□□□□□ -1.03
LSM1P1-201ENST00000438629 ZNF316A6NFI3 1004 aaPredicted RBP8.63□□□□□ -1.03
LSM1P1-201ENST00000438629 PDIA6Q15084 440 aa8.63□□□□□ -1.03
LSM1P1-201ENST00000438629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.63□□□□□ -1.03
LSM1P1-201ENST00000438629 PTCD2Q8WV60 388 aaKnown RBP8.63□□□□□ -1.03
LSM1P1-201ENST00000438629 POTEB2H3BUK9 544 aa8.62□□□□□ -1.03
LSM1P1-201ENST00000438629 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
LSM1P1-201ENST00000438629 SLAIN1Q8ND83 568 aa8.62□□□□□ -1.03
LSM1P1-201ENST00000438629 UPF1Q92900 1129 aaKnown RBP eCLIP8.62□□□□□ -1.03
LSM1P1-201ENST00000438629 POTEJP0CG39 1038 aa8.61□□□□□ -1.03
LSM1P1-201ENST00000438629 DOK7Q18PE1 504 aa8.6□□□□□ -1.03
LSM1P1-201ENST00000438629 RIMBP2O15034 1052 aa8.59□□□□□ -1.03
LSM1P1-201ENST00000438629 LMOD2Q6P5Q4 547 aa8.59□□□□□ -1.03
LSM1P1-201ENST00000438629 SNPHO15079 494 aa8.58□□□□□ -1.04
LSM1P1-201ENST00000438629 EVI5O60447 810 aa8.57□□□□□ -1.04
LSM1P1-201ENST00000438629 PTGER2P43116 358 aa8.57□□□□□ -1.04
LSM1P1-201ENST00000438629 ZSWIM6Q9HCJ5 1215 aa8.56□□□□□ -1.04
LSM1P1-201ENST00000438629 ANO8Q9HCE9 1232 aaPredicted RBP8.55□□□□□ -1.04
LSM1P1-201ENST00000438629 PCDHGA4Q9Y5G9 962 aa8.55□□□□□ -1.04
LSM1P1-201ENST00000438629 PRKCSHP14314 528 aaPredicted RBP8.54□□□□□ -1.04
LSM1P1-201ENST00000438629 MLLT3P42568 568 aaPredicted RBP8.53□□□□□ -1.04
LSM1P1-201ENST00000438629 GRXCR2A6NFK2 248 aa8.52□□□□□ -1.05
LSM1P1-201ENST00000438629 LHX8Q68G74 356 aa8.52□□□□□ -1.05
LSM1P1-201ENST00000438629 ZNF710Q8N1W2 664 aa8.52□□□□□ -1.05
LSM1P1-201ENST00000438629 HOXB3P14651 431 aaPredicted RBP8.5□□□□□ -1.05
LSM1P1-201ENST00000438629 EPAS1Q99814 870 aa8.5□□□□□ -1.05
LSM1P1-201ENST00000438629 DDX12PQ92771 950 aa8.49□□□□□ -1.05
LSM1P1-201ENST00000438629 PHF14O94880 888 aa8.48□□□□□ -1.05
LSM1P1-201ENST00000438629 OTUD5Q96G74 571 aa8.48□□□□□ -1.05
LSM1P1-201ENST00000438629 ARSIQ5FYB1 569 aa8.47□□□□□ -1.05
LSM1P1-201ENST00000438629 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
LSM1P1-201ENST00000438629 GPIHBP1Q8IV16 184 aa8.47□□□□□ -1.05
LSM1P1-201ENST00000438629 ZC3H15Q8WU90 426 aaKnown RBP8.47□□□□□ -1.05
LSM1P1-201ENST00000438629 OSBPP22059 807 aa8.46□□□□□ -1.06
LSM1P1-201ENST00000438629 GPR153Q6NV75 609 aa8.46□□□□□ -1.06
LSM1P1-201ENST00000438629 KDM4FA0A1W2PPD8 638 aa8.45□□□□□ -1.06
LSM1P1-201ENST00000438629 PSDA5PKW4 1024 aaPredicted RBP8.44□□□□□ -1.06
LSM1P1-201ENST00000438629 TYW1BQ6NUM6 668 aa8.44□□□□□ -1.06
LSM1P1-201ENST00000438629 FBXW7Q969H0 707 aa8.44□□□□□ -1.06
LSM1P1-201ENST00000438629 NUTM2FA1L443 756 aa8.43□□□□□ -1.06
LSM1P1-201ENST00000438629 NUDT7P0C024 238 aa8.43□□□□□ -1.06
LSM1P1-201ENST00000438629 JPH4Q96JJ6 628 aa8.43□□□□□ -1.06
LSM1P1-201ENST00000438629 ZMYND10O75800 440 aa8.42□□□□□ -1.06
LSM1P1-201ENST00000438629 HOXB1P14653 301 aaPredicted RBP8.41□□□□□ -1.06
LSM1P1-201ENST00000438629 FOSBP53539 338 aa8.41□□□□□ -1.06
LSM1P1-201ENST00000438629 BARGINQ6ZT62 677 aa8.41□□□□□ -1.06
LSM1P1-201ENST00000438629 PCDHGA10Q9Y5H3 936 aa8.41□□□□□ -1.06
LSM1P1-201ENST00000438629 FCHSD2O94868 740 aa8.4□□□□□ -1.06
LSM1P1-201ENST00000438629 EN1Q05925 392 aaPredicted RBP8.4□□□□□ -1.06
LSM1P1-201ENST00000438629 MAP3K7O43318 606 aa8.39□□□□□ -1.07
LSM1P1-201ENST00000438629 ZNF454Q8N9F8 522 aa8.39□□□□□ -1.07
LSM1P1-201ENST00000438629 KRI1Q8N9T8 703 aaKnown RBP8.39□□□□□ -1.07
LSM1P1-201ENST00000438629 KHSRPQ92945 711 aaKnown RBP eCLIP8.39□□□□□ -1.07
LSM1P1-201ENST00000438629 ZDHHC16Q969W1 377 aa8.39□□□□□ -1.07
LSM1P1-201ENST00000438629 HIC1Q14526 733 aa8.38□□□□□ -1.07
LSM1P1-201ENST00000438629 PPP4R3BQ5MIZ7 849 aa8.38□□□□□ -1.07
LSM1P1-201ENST00000438629 CERKQ8TCT0 537 aa8.37□□□□□ -1.07
LSM1P1-201ENST00000438629 LHX6Q9UPM6 363 aa8.37□□□□□ -1.07
LSM1P1-201ENST00000438629 RBM33Q96EV2 1170 aaKnown RBP8.36□□□□□ -1.07
LSM1P1-201ENST00000438629 GNPATO15228 680 aa8.35□□□□□ -1.07
LSM1P1-201ENST00000438629 MINK1Q8N4C8 1332 aaPredicted RBP8.34□□□□□ -1.07
LSM1P1-201ENST00000438629 PTGDRQ13258 359 aa8.34□□□□□ -1.07
LSM1P1-201ENST00000438629 AK7Q96M32 723 aa8.34□□□□□ -1.07
LSM1P1-201ENST00000438629 GPR37O15354 613 aa8.33□□□□□ -1.08
LSM1P1-201ENST00000438629 PRIM1P49642 420 aaKnown RBP8.33□□□□□ -1.08
LSM1P1-201ENST00000438629 C6orf132Q5T0Z8 1188 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms