RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 DENND4BO75064 1496 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-207ENST00000438317 SAMD9Q5K651 1589 aa16.38■□□□□ 0.21
ERGIC3-207ENST00000438317 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
ERGIC3-207ENST00000438317 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
ERGIC3-207ENST00000438317 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
ERGIC3-207ENST00000438317 SIGLEC1Q9BZZ2 1709 aa16.37■□□□□ 0.21
ERGIC3-207ENST00000438317 ILDR2Q71H61 639 aa16.37■□□□□ 0.21
ERGIC3-207ENST00000438317 CCNB3Q8WWL7 1395 aa16.37■□□□□ 0.21
ERGIC3-207ENST00000438317 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
ERGIC3-207ENST00000438317 LRRC9Q6ZRR7 1453 aa16.36■□□□□ 0.21
ERGIC3-207ENST00000438317 FYCO1Q9BQS8 1478 aa16.36■□□□□ 0.21
ERGIC3-207ENST00000438317 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
ERGIC3-207ENST00000438317 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
ERGIC3-207ENST00000438317 POGZQ7Z3K3 1410 aa16.33■□□□□ 0.2
ERGIC3-207ENST00000438317 YEATS2Q9ULM3 1422 aa16.33■□□□□ 0.2
ERGIC3-207ENST00000438317 FANCAO15360 1455 aa16.33■□□□□ 0.2
ERGIC3-207ENST00000438317 ZMYM4Q5VZL5 1548 aa16.31■□□□□ 0.2
ERGIC3-207ENST00000438317 SOCS7O14512 581 aa16.31■□□□□ 0.2
ERGIC3-207ENST00000438317 ZFYVE16Q7Z3T8 1539 aa16.29■□□□□ 0.2
ERGIC3-207ENST00000438317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.29■□□□□ 0.26e-6■■■■□ 21.5
ERGIC3-207ENST00000438317 DISP3Q9P2K9 1392 aa16.29■□□□□ 0.2
ERGIC3-207ENST00000438317 PLEKHD1A6NEE1 506 aa16.29■□□□□ 0.2
ERGIC3-207ENST00000438317 MLECQ14165 292 aa16.29■□□□□ 0.2
ERGIC3-207ENST00000438317 TTC37Q6PGP7 1564 aa16.28■□□□□ 0.2
ERGIC3-207ENST00000438317 MAGI2Q86UL8 1455 aa16.28■□□□□ 0.2
ERGIC3-207ENST00000438317 CFAP74Q9C0B2 1584 aa16.27■□□□□ 0.2
ERGIC3-207ENST00000438317 FER1L4A9Z1Z3 1794 aa16.27■□□□□ 0.2
ERGIC3-207ENST00000438317 HECW1Q76N89 1606 aa16.27■□□□□ 0.19
ERGIC3-207ENST00000438317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.26■□□□□ 0.19
ERGIC3-207ENST00000438317 ATP1B4Q9UN42 357 aaPredicted RBP16.26■□□□□ 0.19
ERGIC3-207ENST00000438317 ZNF316A6NFI3 1004 aaPredicted RBP16.24■□□□□ 0.19
ERGIC3-207ENST00000438317 ARHGEF12Q9NZN5 1544 aa16.24■□□□□ 0.19
ERGIC3-207ENST00000438317 STRCQ7RTU9 1775 aa16.23■□□□□ 0.19
ERGIC3-207ENST00000438317 CEBPAP49715 358 aaPredicted RBP16.23■□□□□ 0.19
ERGIC3-207ENST00000438317 DHX57Q6P158 1386 aaKnown RBP16.23■□□□□ 0.19
ERGIC3-207ENST00000438317 PREX1Q8TCU6 1659 aa16.22■□□□□ 0.19
ERGIC3-207ENST00000438317 SCAPERQ9BY12 1400 aa16.21■□□□□ 0.19
ERGIC3-207ENST00000438317 ATP10AO60312 1499 aa16.21■□□□□ 0.19
ERGIC3-207ENST00000438317 PLCH2O75038 1416 aa16.19■□□□□ 0.18
ERGIC3-207ENST00000438317 DIEXFQ68CQ4 756 aaKnown RBP16.19■□□□□ 0.18
ERGIC3-207ENST00000438317 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
ERGIC3-207ENST00000438317 C9orf84Q5VXU9 1444 aa16.17■□□□□ 0.18
ERGIC3-207ENST00000438317 SETD5Q9C0A6 1442 aa16.17■□□□□ 0.18
ERGIC3-207ENST00000438317 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
ERGIC3-207ENST00000438317 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
ERGIC3-207ENST00000438317 FAM50AQ14320 339 aaKnown RBP16.14■□□□□ 0.17
ERGIC3-207ENST00000438317 SETD1BQ9UPS6 1966 aaKnown RBP16.14■□□□□ 0.17
ERGIC3-207ENST00000438317 CDK13Q14004 1512 aaKnown RBP16.14■□□□□ 0.17
ERGIC3-207ENST00000438317 SPATA31D1Q6ZQQ2 1576 aa16.13■□□□□ 0.17
ERGIC3-207ENST00000438317 ITGAEP38570 1179 aa16.13■□□□□ 0.17
ERGIC3-207ENST00000438317 PTPRTO14522 1441 aa16.12■□□□□ 0.17
ERGIC3-207ENST00000438317 UHRF1BP1Q6BDS2 1440 aa16.12■□□□□ 0.17
ERGIC3-207ENST00000438317 SUPT6HQ7KZ85 1726 aaKnown RBP16.12■□□□□ 0.17
ERGIC3-207ENST00000438317 LRRIQ1Q96JM4 1722 aa16.12■□□□□ 0.17
ERGIC3-207ENST00000438317 EFCAB2Q5VUJ9 269 aa16.11■□□□□ 0.17
ERGIC3-207ENST00000438317 LTBP4Q8N2S1 1624 aa16.11■□□□□ 0.17
ERGIC3-207ENST00000438317 RAB3GAP2Q9H2M9 1393 aa16.11■□□□□ 0.17
ERGIC3-207ENST00000438317 EHBP1L1Q8N3D4 1523 aa16.1■□□□□ 0.17
ERGIC3-207ENST00000438317 AFAP1Q8N556 730 aa16.09■□□□□ 0.17
ERGIC3-207ENST00000438317 FGD6Q6ZV73 1430 aa16.09■□□□□ 0.17
ERGIC3-207ENST00000438317 KDM5CP41229 1560 aa16.07■□□□□ 0.16
ERGIC3-207ENST00000438317 MYO5CQ9NQX4 1742 aa16.06■□□□□ 0.16
ERGIC3-207ENST00000438317 ZNF518AQ6AHZ1 1483 aa16.06■□□□□ 0.16
ERGIC3-207ENST00000438317 C3P01024 1663 aa16.05■□□□□ 0.16
ERGIC3-207ENST00000438317 DIP2CQ9Y2E4 1556 aa16.05■□□□□ 0.16
ERGIC3-207ENST00000438317 NCOA2Q15596 1464 aa16.05■□□□□ 0.16
ERGIC3-207ENST00000438317 IQSEC2Q5JU85 1478 aa16.05■□□□□ 0.16
ERGIC3-207ENST00000438317 MYOM3Q5VTT5 1437 aa16.05■□□□□ 0.16
ERGIC3-207ENST00000438317 TIMELESSQ9UNS1 1208 aa16.05■□□□□ 0.16
ERGIC3-207ENST00000438317 REREQ9P2R6 1566 aa16.04■□□□□ 0.16
ERGIC3-207ENST00000438317 TRAPPC8Q9Y2L5 1435 aa16.02■□□□□ 0.16
ERGIC3-207ENST00000438317 KIF14Q15058 1648 aa16.02■□□□□ 0.16
ERGIC3-207ENST00000438317 NCOA1Q15788 1441 aa16.02■□□□□ 0.15
ERGIC3-207ENST00000438317 ABCA6Q8N139 1617 aa16.01■□□□□ 0.15
ERGIC3-207ENST00000438317 ACIN1Q9UKV3 1341 aaKnown RBP16■□□□□ 0.15
ERGIC3-207ENST00000438317 AGLP35573 1532 aa16■□□□□ 0.15
ERGIC3-207ENST00000438317 MLH3Q9UHC1 1453 aa16■□□□□ 0.15
ERGIC3-207ENST00000438317 CDK11AQ9UQ88 783 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-207ENST00000438317 ARHGAP5Q13017 1502 aa15.99■□□□□ 0.15
ERGIC3-207ENST00000438317 MYT1LQ9UL68 1186 aa15.98■□□□□ 0.15
ERGIC3-207ENST00000438317 PTPN23Q9H3S7 1636 aa15.97■□□□□ 0.15
ERGIC3-207ENST00000438317 TROQ12816 1431 aaPredicted RBP15.97■□□□□ 0.15
ERGIC3-207ENST00000438317 MIA2Q96PC5 1412 aa15.97■□□□□ 0.15
ERGIC3-207ENST00000438317 TCOF1Q13428 1488 aaKnown RBP15.97■□□□□ 0.15
ERGIC3-207ENST00000438317 CDC42BPBQ9Y5S2 1711 aa15.96■□□□□ 0.15
ERGIC3-207ENST00000438317 HFM1A2PYH4 1435 aa15.95■□□□□ 0.14
ERGIC3-207ENST00000438317 ESF1Q9H501 851 aaKnown RBP15.95■□□□□ 0.14
ERGIC3-207ENST00000438317 CAMSAP1Q5T5Y3 1602 aa15.94■□□□□ 0.14
ERGIC3-207ENST00000438317 CNTLNQ9NXG0 1405 aa15.93■□□□□ 0.14
ERGIC3-207ENST00000438317 ZNF335Q9H4Z2 1342 aaPredicted RBP15.93■□□□□ 0.14
ERGIC3-207ENST00000438317 NCKAP5LQ9HCH0 1330 aa15.93■□□□□ 0.14
ERGIC3-207ENST00000438317 KIDINS220Q9ULH0 1771 aa15.92■□□□□ 0.14
ERGIC3-207ENST00000438317 ABCC1P33527 1531 aa15.91■□□□□ 0.14
ERGIC3-207ENST00000438317 UBAP1LF5GYI3 381 aa15.91■□□□□ 0.14
ERGIC3-207ENST00000438317 CENPBP07199 599 aaPredicted RBP15.91■□□□□ 0.14
ERGIC3-207ENST00000438317 NPATQ14207 1427 aa15.91■□□□□ 0.14
ERGIC3-207ENST00000438317 ZMYM3Q14202 1370 aa15.89■□□□□ 0.13
ERGIC3-207ENST00000438317 ITSN2Q9NZM3 1697 aa15.89■□□□□ 0.13
ERGIC3-207ENST00000438317 NAIPQ13075 1403 aa15.88■□□□□ 0.13
ERGIC3-207ENST00000438317 PTPRKQ15262 1439 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms