RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 ADGRL1O94910 1474 aa25.69■■□□□ 1.7
CTSD-205ENST00000438213 SCAPERQ9BY12 1400 aa25.69■■□□□ 1.7
CTSD-205ENST00000438213 MAP3K1Q13233 1512 aa25.68■■□□□ 1.7
CTSD-205ENST00000438213 CFDP1Q9UEE9 299 aaPredicted RBP25.67■■□□□ 1.7
CTSD-205ENST00000438213 GPATCH8Q9UKJ3 1502 aaKnown RBP25.65■■□□□ 1.7
CTSD-205ENST00000438213 ZNF777Q9ULD5 760 aaPredicted RBP25.65■■□□□ 1.7
CTSD-205ENST00000438213 LRRC9Q6ZRR7 1453 aa25.64■■□□□ 1.69
CTSD-205ENST00000438213 KANK4Q5T7N3 995 aaPredicted RBP25.63■■□□□ 1.69
CTSD-205ENST00000438213 CDC42BPBQ9Y5S2 1711 aa25.62■■□□□ 1.69
CTSD-205ENST00000438213 PREX2Q70Z35 1606 aa25.62■■□□□ 1.69
CTSD-205ENST00000438213 CDC42BPAQ5VT25 1732 aa25.6■■□□□ 1.69
CTSD-205ENST00000438213 NCOA2Q15596 1464 aa25.58■■□□□ 1.69
CTSD-205ENST00000438213 SUPT6HQ7KZ85 1726 aaKnown RBP25.57■■□□□ 1.68
CTSD-205ENST00000438213 POGZQ7Z3K3 1410 aa25.57■■□□□ 1.68
CTSD-205ENST00000438213 AFAP1Q8N556 730 aa25.57■■□□□ 1.68
CTSD-205ENST00000438213 RICTORQ6R327 1708 aa25.55■■□□□ 1.68
CTSD-205ENST00000438213 FRMPD1Q5SYB0 1578 aa25.55■■□□□ 1.68
CTSD-205ENST00000438213 MYT1LQ9UL68 1186 aa25.54■■□□□ 1.68
CTSD-205ENST00000438213 ZNF518AQ6AHZ1 1483 aa25.53■■□□□ 1.68
CTSD-205ENST00000438213 MAGI2Q86UL8 1455 aa25.53■■□□□ 1.68
CTSD-205ENST00000438213 HNRNPMP52272 730 aaKnown RBP eCLIP25.52■■□□□ 1.68
CTSD-205ENST00000438213 PLEKHH2Q8IVE3 1493 aa25.52■■□□□ 1.68
CTSD-205ENST00000438213 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
CTSD-205ENST00000438213 KIAA1107Q9UPP5 1409 aa25.5■■□□□ 1.67
CTSD-205ENST00000438213 ZMYM4Q5VZL5 1548 aa25.49■■□□□ 1.67
CTSD-205ENST00000438213 ABCC1P33527 1531 aa25.48■■□□□ 1.67
CTSD-205ENST00000438213 ITSN2Q9NZM3 1697 aa25.48■■□□□ 1.67
CTSD-205ENST00000438213 ARHGEF12Q9NZN5 1544 aa25.47■■□□□ 1.67
CTSD-205ENST00000438213 TRAPPC8Q9Y2L5 1435 aa25.47■■□□□ 1.67
CTSD-205ENST00000438213 ZNF644Q9H582 1327 aaPredicted RBP25.47■■□□□ 1.67
CTSD-205ENST00000438213 ARID4BQ4LE39 1312 aaPredicted RBP25.46■■□□□ 1.67
CTSD-205ENST00000438213 KDM4FA0A1W2PPD8 638 aa25.46■■□□□ 1.67
CTSD-205ENST00000438213 SAMD9LQ8IVG5 1584 aa25.46■■□□□ 1.67
CTSD-205ENST00000438213 ZFYVE16Q7Z3T8 1539 aa25.44■■□□□ 1.66
CTSD-205ENST00000438213 RSPH4AQ5TD94 716 aa25.44■■□□□ 1.66
CTSD-205ENST00000438213 YEATS2Q9ULM3 1422 aa25.44■■□□□ 1.66
CTSD-205ENST00000438213 SPAG9O60271 1321 aaKnown RBP25.41■■□□□ 1.66
CTSD-205ENST00000438213 KDM5CP41229 1560 aa25.41■■□□□ 1.66
CTSD-205ENST00000438213 SYCP2Q9BX26 1530 aa25.41■■□□□ 1.66
CTSD-205ENST00000438213 MLH3Q9UHC1 1453 aa25.4■■□□□ 1.66
CTSD-205ENST00000438213 ARHGEF40Q8TER5 1519 aa25.4■■□□□ 1.66
CTSD-205ENST00000438213 ATP10AO60312 1499 aa25.4■■□□□ 1.66
CTSD-205ENST00000438213 MYOM3Q5VTT5 1437 aa25.39■■□□□ 1.66
CTSD-205ENST00000438213 MIA2Q96PC5 1412 aa25.38■■□□□ 1.65
CTSD-205ENST00000438213 HECW2Q9P2P5 1572 aa25.35■■□□□ 1.65
CTSD-205ENST00000438213 CAMSAP2Q08AD1 1489 aa25.34■■□□□ 1.65
CTSD-205ENST00000438213 MBD5Q9P267 1494 aa25.34■■□□□ 1.65
CTSD-205ENST00000438213 TSPY4P0CV99 314 aa25.33■■□□□ 1.65
CTSD-205ENST00000438213 TSPY10P0CW01 314 aa25.33■■□□□ 1.65
CTSD-205ENST00000438213 C9orf84Q5VXU9 1444 aa25.33■■□□□ 1.65
CTSD-205ENST00000438213 MLECQ14165 292 aa25.27■■□□□ 1.64
CTSD-205ENST00000438213 RTEL1-TNFRSF6BF6WH68 1400 aa25.27■■□□□ 1.64
CTSD-205ENST00000438213 CCDC141Q6ZP82 1450 aa25.27■■□□□ 1.64
CTSD-205ENST00000438213 KIDINS220Q9ULH0 1771 aa25.26■■□□□ 1.63
CTSD-205ENST00000438213 FGD6Q6ZV73 1430 aa25.25■■□□□ 1.63
CTSD-205ENST00000438213 DIP2CQ9Y2E4 1556 aa25.25■■□□□ 1.63
CTSD-205ENST00000438213 ATP7AQ04656 1500 aa25.24■■□□□ 1.63
CTSD-205ENST00000438213 PPARGC1BQ86YN6 1023 aaKnown RBP25.24■■□□□ 1.63
CTSD-205ENST00000438213 ARHGEF5Q12774 1597 aa25.22■■□□□ 1.63
CTSD-205ENST00000438213 ABCA6Q8N139 1617 aa25.22■■□□□ 1.63
CTSD-205ENST00000438213 REREQ9P2R6 1566 aa25.21■■□□□ 1.63
CTSD-205ENST00000438213 BCORL1Q5H9F3 1711 aa25.2■■□□□ 1.63
CTSD-205ENST00000438213 PTPN23Q9H3S7 1636 aa25.19■■□□□ 1.62
CTSD-205ENST00000438213 INO80Q9ULG1 1556 aaPredicted RBP25.18■■□□□ 1.62
CTSD-205ENST00000438213 FAM50AQ14320 339 aaKnown RBP25.18■■□□□ 1.62
CTSD-205ENST00000438213 ADAMTSL3P82987 1691 aa25.17■■□□□ 1.62
CTSD-205ENST00000438213 AGLP35573 1532 aa25.17■■□□□ 1.62
CTSD-205ENST00000438213 A2MP01023 1474 aa25.16■■□□□ 1.62
CTSD-205ENST00000438213 TCOF1Q13428 1488 aaKnown RBP25.15■■□□□ 1.62
CTSD-205ENST00000438213 ESF1Q9H501 851 aaKnown RBP25.15■■□□□ 1.62
CTSD-205ENST00000438213 SIGLEC1Q9BZZ2 1709 aa25.15■■□□□ 1.62
CTSD-205ENST00000438213 DHX29Q7Z478 1369 aaKnown RBP25.14■■□□□ 1.61
CTSD-205ENST00000438213 ABCC5O15440 1437 aa25.11■■□□□ 1.61
CTSD-205ENST00000438213 PTPRMP28827 1452 aa25.09■■□□□ 1.61
CTSD-205ENST00000438213 ADGBQ8N7X0 1667 aa25.09■■□□□ 1.61
CTSD-205ENST00000438213 MADDQ8WXG6 1647 aa25.08■■□□□ 1.61
CTSD-205ENST00000438213 GGT6Q6P531 493 aa25.08■■□□□ 1.61
CTSD-205ENST00000438213 DAPK1P53355 1430 aa25.08■■□□□ 1.61
CTSD-205ENST00000438213 MAST1Q9Y2H9 1570 aa25.07■■□□□ 1.6
CTSD-205ENST00000438213 PPP6R1Q9UPN7 881 aa25.07■■□□□ 1.6
CTSD-205ENST00000438213 KIF3BO15066 747 aa25.06■■□□□ 1.6
CTSD-205ENST00000438213 CHIC2Q9UKJ5 165 aa25.05■■□□□ 1.6
CTSD-205ENST00000438213 SHANK2Q9UPX8 1470 aa25.04■■□□□ 1.6
CTSD-205ENST00000438213 PLXNC1O60486 1568 aa25.04■■□□□ 1.6
CTSD-205ENST00000438213 PLPPR3Q6T4P5 718 aa25.03■■□□□ 1.6
CTSD-205ENST00000438213 RRP7BPQ9NSQ0 103 aa25.03■■□□□ 1.6
CTSD-205ENST00000438213 DNMT1P26358 1616 aaKnown RBP25.03■■□□□ 1.6
CTSD-205ENST00000438213 RIMS1Q86UR5 1692 aaKnown RBP25.02■■□□□ 1.6
CTSD-205ENST00000438213 ANKRD30AQ9BXX3 1397 aa25.01■■□□□ 1.59
CTSD-205ENST00000438213 FER1L4A9Z1Z3 1794 aa25■■□□□ 1.59
CTSD-205ENST00000438213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.99■■□□□ 1.59
CTSD-205ENST00000438213 CNTLNQ9NXG0 1405 aa24.99■■□□□ 1.59
CTSD-205ENST00000438213 KIF15Q9NS87 1388 aa24.98■■□□□ 1.59
CTSD-205ENST00000438213 CEBPAP49715 358 aaPredicted RBP24.96■■□□□ 1.59
CTSD-205ENST00000438213 CROCC2H7BZ55 1655 aa24.95■■□□□ 1.58
CTSD-205ENST00000438213 DUOX2Q9NRD8 1548 aa24.95■■□□□ 1.58
CTSD-205ENST00000438213 NCOA1Q15788 1441 aa24.95■■□□□ 1.58
CTSD-205ENST00000438213 ITGAEP38570 1179 aa24.93■■□□□ 1.58
CTSD-205ENST00000438213 ZMYM3Q14202 1370 aa24.92■■□□□ 1.58
CTSD-205ENST00000438213 WASHC2CQ9Y4E1 1318 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms