RNA–Protein interactions for RNA: ENST00000437042.6

RARB-203, Transcript of retinoic acid receptor beta, humanhuman

TSL 1 (best) BASIC

Gene RARB, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-203ENST00000437042 ABCC5O15440 1437 aa16.61■□□□□ 0.25
RARB-203ENST00000437042 ROCK1Q13464 1354 aa16.61■□□□□ 0.25
RARB-203ENST00000437042 DNMT1P26358 1616 aaKnown RBP16.6■□□□□ 0.25
RARB-203ENST00000437042 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
RARB-203ENST00000437042 NEFLP07196 543 aa16.59■□□□□ 0.25
RARB-203ENST00000437042 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
RARB-203ENST00000437042 ANKRD30BQ9BXX2 1392 aa16.58■□□□□ 0.24
RARB-203ENST00000437042 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
RARB-203ENST00000437042 EIF4G3O43432 1585 aaKnown RBP16.56■□□□□ 0.24
RARB-203ENST00000437042 C11orf95C9JLR9 678 aaPredicted RBP16.55■□□□□ 0.24
RARB-203ENST00000437042 RPRD2Q5VT52 1461 aaKnown RBP16.55■□□□□ 0.24
RARB-203ENST00000437042 NBPF8Q3BBV2 869 aa16.55■□□□□ 0.24
RARB-203ENST00000437042 PRG4Q92954 1404 aaPredicted RBP16.54■□□□□ 0.24
RARB-203ENST00000437042 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
RARB-203ENST00000437042 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
RARB-203ENST00000437042 CNTLNQ9NXG0 1405 aa16.52■□□□□ 0.24
RARB-203ENST00000437042 TEX14Q8IWB6 1497 aa16.52■□□□□ 0.23
RARB-203ENST00000437042 TROQ12816 1431 aaPredicted RBP16.51■□□□□ 0.23
RARB-203ENST00000437042 NCOA1Q15788 1441 aa16.51■□□□□ 0.23
RARB-203ENST00000437042 CCDC7Q96M83 1385 aa16.5■□□□□ 0.23
RARB-203ENST00000437042 CFDP1Q9UEE9 299 aaPredicted RBP16.5■□□□□ 0.23
RARB-203ENST00000437042 PLB1Q6P1J6 1458 aa16.5■□□□□ 0.23
RARB-203ENST00000437042 CCDC184Q52MB2 194 aa16.49■□□□□ 0.23
RARB-203ENST00000437042 CAMSAP2Q08AD1 1489 aa16.49■□□□□ 0.23
RARB-203ENST00000437042 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
RARB-203ENST00000437042 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
RARB-203ENST00000437042 PZPP20742 1482 aa16.47■□□□□ 0.23
RARB-203ENST00000437042 GPATCH8Q9UKJ3 1502 aaKnown RBP16.47■□□□□ 0.23
RARB-203ENST00000437042 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
RARB-203ENST00000437042 KIF14Q15058 1648 aa16.46■□□□□ 0.23
RARB-203ENST00000437042 ZNF777Q9ULD5 760 aaPredicted RBP16.46■□□□□ 0.23
RARB-203ENST00000437042 ITSN2Q9NZM3 1697 aa16.46■□□□□ 0.23
RARB-203ENST00000437042 PRKRIP1Q9H875 184 aaPredicted RBP16.46■□□□□ 0.23
RARB-203ENST00000437042 SPATA31E1Q6ZUB1 1445 aa16.46■□□□□ 0.22
RARB-203ENST00000437042 FBLN2P98095 1184 aa16.45■□□□□ 0.22
RARB-203ENST00000437042 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
RARB-203ENST00000437042 ADGBQ8N7X0 1667 aa16.44■□□□□ 0.22
RARB-203ENST00000437042 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
RARB-203ENST00000437042 ADCY10Q96PN6 1610 aa16.43■□□□□ 0.22
RARB-203ENST00000437042 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
RARB-203ENST00000437042 JPH4Q96JJ6 628 aa16.43■□□□□ 0.22
RARB-203ENST00000437042 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
RARB-203ENST00000437042 CARMIL2Q6F5E8 1435 aa16.41■□□□□ 0.22
RARB-203ENST00000437042 CROCC2H7BZ55 1655 aa16.41■□□□□ 0.22
RARB-203ENST00000437042 POLR1AO95602 1720 aaPredicted RBP16.41■□□□□ 0.22
RARB-203ENST00000437042 KIAA1107Q9UPP5 1409 aa16.39■□□□□ 0.22
RARB-203ENST00000437042 IRX6P78412 446 aaPredicted RBP16.39■□□□□ 0.21
RARB-203ENST00000437042 FAM9BQ8IZU0 186 aa16.39■□□□□ 0.21
RARB-203ENST00000437042 NUP160Q12769 1436 aa16.39■□□□□ 0.21
RARB-203ENST00000437042 PKD2Q13563 968 aa16.38■□□□□ 0.21
RARB-203ENST00000437042 MRS2Q9HD23 443 aa16.38■□□□□ 0.21
RARB-203ENST00000437042 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
RARB-203ENST00000437042 MBD5Q9P267 1494 aa16.37■□□□□ 0.21
RARB-203ENST00000437042 RBM19Q9Y4C8 960 aaKnown RBP16.37■□□□□ 0.21
RARB-203ENST00000437042 ANKRD50Q9ULJ7 1429 aa16.36■□□□□ 0.21
RARB-203ENST00000437042 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
RARB-203ENST00000437042 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
RARB-203ENST00000437042 ZNF326Q5BKZ1 582 aaKnown RBP16.35■□□□□ 0.21
RARB-203ENST00000437042 ABCA8O94911 1581 aa16.33■□□□□ 0.21
RARB-203ENST00000437042 ATP10BO94823 1461 aa16.33■□□□□ 0.2
RARB-203ENST00000437042 ABCC10Q5T3U5 1492 aa16.33■□□□□ 0.2
RARB-203ENST00000437042 USP47Q96K76 1375 aa16.32■□□□□ 0.2
RARB-203ENST00000437042 BCORL1Q5H9F3 1711 aa16.32■□□□□ 0.2
RARB-203ENST00000437042 ANP32EQ9BTT0 268 aa16.31■□□□□ 0.2
RARB-203ENST00000437042 ZBED9Q6R2W3 1325 aa16.31■□□□□ 0.2
RARB-203ENST00000437042 NUP155O75694 1391 aa16.3■□□□□ 0.2
RARB-203ENST00000437042 C9orf84Q5VXU9 1444 aa16.3■□□□□ 0.2
RARB-203ENST00000437042 DHX29Q7Z478 1369 aaKnown RBP16.3■□□□□ 0.2
RARB-203ENST00000437042 POLR3GLQ9BT43 218 aa16.29■□□□□ 0.2
RARB-203ENST00000437042 KDM5CP41229 1560 aa16.28■□□□□ 0.2
RARB-203ENST00000437042 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
RARB-203ENST00000437042 TSPY4P0CV99 314 aa16.27■□□□□ 0.2
RARB-203ENST00000437042 TSPY10P0CW01 314 aa16.27■□□□□ 0.2
RARB-203ENST00000437042 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
RARB-203ENST00000437042 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
RARB-203ENST00000437042 ERICH6BQ5W0A0 696 aa16.26■□□□□ 0.19
RARB-203ENST00000437042 UHRF1BP1Q6BDS2 1440 aa16.26■□□□□ 0.19
RARB-203ENST00000437042 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
RARB-203ENST00000437042 ARID4BQ4LE39 1312 aaPredicted RBP16.23■□□□□ 0.19
RARB-203ENST00000437042 KDM5DQ9BY66 1539 aa16.23■□□□□ 0.19
RARB-203ENST00000437042 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
RARB-203ENST00000437042 KIF15Q9NS87 1388 aa16.23■□□□□ 0.19
RARB-203ENST00000437042 CARD11Q9BXL7 1154 aa16.22■□□□□ 0.19
RARB-203ENST00000437042 KDM2AQ9Y2K7 1162 aa16.22■□□□□ 0.19
RARB-203ENST00000437042 ARHGEF12Q9NZN5 1544 aa16.21■□□□□ 0.18
RARB-203ENST00000437042 ARHGEF5Q12774 1597 aa16.21■□□□□ 0.18
RARB-203ENST00000437042 PTPRGP23470 1445 aa16.2■□□□□ 0.18
RARB-203ENST00000437042 DCAF11Q8TEB1 546 aa16.19■□□□□ 0.18
RARB-203ENST00000437042 CDC42BPBQ9Y5S2 1711 aa16.18■□□□□ 0.18
RARB-203ENST00000437042 ST20-MTHFSA0A0A6YYL1 179 aa16.18■□□□□ 0.18
RARB-203ENST00000437042 SAMD9LQ8IVG5 1584 aa16.18■□□□□ 0.18
RARB-203ENST00000437042 ROCK2O75116 1388 aaKnown RBP16.17■□□□□ 0.18
RARB-203ENST00000437042 B4GALNT3Q6L9W6 998 aa16.16■□□□□ 0.18
RARB-203ENST00000437042 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
RARB-203ENST00000437042 SMG6Q86US8 1419 aaKnown RBP16.15■□□□□ 0.18
RARB-203ENST00000437042 PREX2Q70Z35 1606 aa16.15■□□□□ 0.18
RARB-203ENST00000437042 FAM135AQ9P2D6 1515 aa16.15■□□□□ 0.18
RARB-203ENST00000437042 PNISRQ8TF01 805 aaKnown RBP16.14■□□□□ 0.17
RARB-203ENST00000437042 MSH5O43196 834 aa16.14■□□□□ 0.17
RARB-203ENST00000437042 SENP3-EIF4A1A0A087X0R7 540 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms