RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 MAP3K4Q9Y6R4 1608 aa20.53■□□□□ 0.88
RPE-208ENST00000436630 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
RPE-208ENST00000436630 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.88
RPE-208ENST00000436630 PLCH2O75038 1416 aa20.52■□□□□ 0.87
RPE-208ENST00000436630 ARHGAP5Q13017 1502 aa20.51■□□□□ 0.87
RPE-208ENST00000436630 KIF13AQ9H1H9 1805 aa20.5■□□□□ 0.87
RPE-208ENST00000436630 PLEKHH2Q8IVE3 1493 aa20.48■□□□□ 0.87
RPE-208ENST00000436630 CFDP1Q9UEE9 299 aaPredicted RBP20.47■□□□□ 0.87
RPE-208ENST00000436630 CAMSAP2Q08AD1 1489 aa20.47■□□□□ 0.87
RPE-208ENST00000436630 CD109Q6YHK3 1445 aa20.46■□□□□ 0.87
RPE-208ENST00000436630 SAMD9LQ8IVG5 1584 aa20.45■□□□□ 0.86
RPE-208ENST00000436630 FANCAO15360 1455 aa20.43■□□□□ 0.86
RPE-208ENST00000436630 TRHP20396 242 aaPredicted RBP20.42■□□□□ 0.86
RPE-208ENST00000436630 ABCC1P33527 1531 aa20.42■□□□□ 0.86
RPE-208ENST00000436630 ARHGEF5Q12774 1597 aa20.42■□□□□ 0.86
RPE-208ENST00000436630 DNMT1P26358 1616 aaKnown RBP20.42■□□□□ 0.86
RPE-208ENST00000436630 EFCAB2Q5VUJ9 269 aa20.41■□□□□ 0.86
RPE-208ENST00000436630 TEX14Q8IWB6 1497 aa20.41■□□□□ 0.86
RPE-208ENST00000436630 NEO1Q92859 1461 aa20.41■□□□□ 0.86
RPE-208ENST00000436630 KIAA1107Q9UPP5 1409 aa20.4■□□□□ 0.86
RPE-208ENST00000436630 CROCC2H7BZ55 1655 aa20.39■□□□□ 0.86
RPE-208ENST00000436630 FAM69CQ0P6D2 419 aa20.39■□□□□ 0.85
RPE-208ENST00000436630 FAM50AQ14320 339 aaKnown RBP20.38■□□□□ 0.85
RPE-208ENST00000436630 PPRC1Q5VV67 1664 aaKnown RBP20.38■□□□□ 0.85
RPE-208ENST00000436630 SYCP2Q9BX26 1530 aa20.37■□□□□ 0.85
RPE-208ENST00000436630 SHANK2Q9UPX8 1470 aa20.35■□□□□ 0.85
RPE-208ENST00000436630 TSPOAP1O95153 1857 aa20.35■□□□□ 0.85
RPE-208ENST00000436630 ADGRL1O94910 1474 aa20.34■□□□□ 0.85
RPE-208ENST00000436630 CCDC141Q6ZP82 1450 aa20.34■□□□□ 0.85
RPE-208ENST00000436630 ZNF777Q9ULD5 760 aaPredicted RBP20.33■□□□□ 0.85
RPE-208ENST00000436630 DAPK1P53355 1430 aa20.33■□□□□ 0.84
RPE-208ENST00000436630 ADGBQ8N7X0 1667 aa20.32■□□□□ 0.84
RPE-208ENST00000436630 MBD5Q9P267 1494 aa20.32■□□□□ 0.84
RPE-208ENST00000436630 RSPH4AQ5TD94 716 aa20.32■□□□□ 0.84
RPE-208ENST00000436630 AKNAQ7Z591 1439 aa20.32■□□□□ 0.84
RPE-208ENST00000436630 ZNF644Q9H582 1327 aaPredicted RBP20.3■□□□□ 0.84
RPE-208ENST00000436630 MAST1Q9Y2H9 1570 aa20.29■□□□□ 0.84
RPE-208ENST00000436630 ABCC5O15440 1437 aa20.29■□□□□ 0.84
RPE-208ENST00000436630 PCGF6Q9BYE7 350 aa20.27■□□□□ 0.84
RPE-208ENST00000436630 ZNF518AQ6AHZ1 1483 aa20.26■□□□□ 0.83
RPE-208ENST00000436630 ARHGEF12Q9NZN5 1544 aa20.26■□□□□ 0.83
RPE-208ENST00000436630 ADGRL2O95490 1459 aa20.25■□□□□ 0.83
RPE-208ENST00000436630 POGZQ7Z3K3 1410 aa20.25■□□□□ 0.83
RPE-208ENST00000436630 SCAPERQ9BY12 1400 aa20.25■□□□□ 0.83
RPE-208ENST00000436630 ROCK1Q13464 1354 aa20.24■□□□□ 0.83
RPE-208ENST00000436630 KDM5CP41229 1560 aa20.24■□□□□ 0.83
RPE-208ENST00000436630 GCC2Q8IWJ2 1684 aa20.23■□□□□ 0.83
RPE-208ENST00000436630 PLXNC1O60486 1568 aa20.23■□□□□ 0.83
RPE-208ENST00000436630 C9orf84Q5VXU9 1444 aa20.23■□□□□ 0.83
RPE-208ENST00000436630 RICTORQ6R327 1708 aa20.23■□□□□ 0.83
RPE-208ENST00000436630 DENND4BO75064 1496 aaPredicted RBP20.23■□□□□ 0.83
RPE-208ENST00000436630 INO80Q9ULG1 1556 aaPredicted RBP20.21■□□□□ 0.83
RPE-208ENST00000436630 PTPRKQ15262 1439 aa20.21■□□□□ 0.83
RPE-208ENST00000436630 TRAPPC8Q9Y2L5 1435 aa20.2■□□□□ 0.82
RPE-208ENST00000436630 TSPY4P0CV99 314 aa20.2■□□□□ 0.82
RPE-208ENST00000436630 TSPY10P0CW01 314 aa20.2■□□□□ 0.82
RPE-208ENST00000436630 ITGAEP38570 1179 aa20.2■□□□□ 0.82
RPE-208ENST00000436630 HNRNPMP52272 730 aaKnown RBP eCLIP20.2■□□□□ 0.82
RPE-208ENST00000436630 ZFYVE16Q7Z3T8 1539 aa20.2■□□□□ 0.82
RPE-208ENST00000436630 RTEL1-TNFRSF6BF6WH68 1400 aa20.19■□□□□ 0.82
RPE-208ENST00000436630 HECW2Q9P2P5 1572 aa20.19■□□□□ 0.82
RPE-208ENST00000436630 HFM1A2PYH4 1435 aa20.19■□□□□ 0.82
RPE-208ENST00000436630 ZMYM4Q5VZL5 1548 aa20.18■□□□□ 0.82
RPE-208ENST00000436630 ANKRD30AQ9BXX3 1397 aa20.18■□□□□ 0.82
RPE-208ENST00000436630 ATP7AQ04656 1500 aa20.17■□□□□ 0.82
RPE-208ENST00000436630 FRMPD1Q5SYB0 1578 aa20.17■□□□□ 0.82
RPE-208ENST00000436630 MLH3Q9UHC1 1453 aa20.15■□□□□ 0.82
RPE-208ENST00000436630 NCOA1Q15788 1441 aa20.14■□□□□ 0.81
RPE-208ENST00000436630 SPAG9O60271 1321 aaKnown RBP20.14■□□□□ 0.81
RPE-208ENST00000436630 MAGI2Q86UL8 1455 aa20.12■□□□□ 0.81
RPE-208ENST00000436630 KIDINS220Q9ULH0 1771 aa20.12■□□□□ 0.81
RPE-208ENST00000436630 NAIPQ13075 1403 aa20.11■□□□□ 0.81
RPE-208ENST00000436630 SETD5Q9C0A6 1442 aa20.1■□□□□ 0.81
RPE-208ENST00000436630 DUOX2Q9NRD8 1548 aa20.1■□□□□ 0.81
RPE-208ENST00000436630 KDM6BO15054 1643 aa20.09■□□□□ 0.81
RPE-208ENST00000436630 KIF15Q9NS87 1388 aa20.09■□□□□ 0.81
RPE-208ENST00000436630 ACIN1Q9UKV3 1341 aaKnown RBP20.09■□□□□ 0.81
RPE-208ENST00000436630 AFAP1Q8N556 730 aa20.09■□□□□ 0.81
RPE-208ENST00000436630 CHIC2Q9UKJ5 165 aa20.09■□□□□ 0.81
RPE-208ENST00000436630 ABCA6Q8N139 1617 aa20.06■□□□□ 0.8
RPE-208ENST00000436630 ERBINQ96RT1 1412 aa20.06■□□□□ 0.8
RPE-208ENST00000436630 EIF2AK4Q9P2K8 1649 aaKnown RBP20.05■□□□□ 0.8
RPE-208ENST00000436630 ARHGEF40Q8TER5 1519 aa20.05■□□□□ 0.8
RPE-208ENST00000436630 HRCP23327 699 aa20.04■□□□□ 0.8
RPE-208ENST00000436630 RAB3GAP2Q9H2M9 1393 aa20.04■□□□□ 0.8
RPE-208ENST00000436630 DIP2CQ9Y2E4 1556 aa20.04■□□□□ 0.8
RPE-208ENST00000436630 ANKRD50Q9ULJ7 1429 aa20.03■□□□□ 0.8
RPE-208ENST00000436630 RAPGEF3O95398 923 aa20.03■□□□□ 0.8
RPE-208ENST00000436630 RRP7BPQ9NSQ0 103 aa20.03■□□□□ 0.8
RPE-208ENST00000436630 REREQ9P2R6 1566 aa20.03■□□□□ 0.8
RPE-208ENST00000436630 COL17A1Q9UMD9 1497 aaPredicted RBP20.02■□□□□ 0.8
RPE-208ENST00000436630 BCORL1Q5H9F3 1711 aa20.01■□□□□ 0.79
RPE-208ENST00000436630 MYT1LQ9UL68 1186 aa20■□□□□ 0.79
RPE-208ENST00000436630 A2MP01023 1474 aa19.99■□□□□ 0.79
RPE-208ENST00000436630 UNC13BO14795 1591 aa19.97■□□□□ 0.79
RPE-208ENST00000436630 DHX29Q7Z478 1369 aaKnown RBP19.96■□□□□ 0.79
RPE-208ENST00000436630 DEPDC5O75140 1603 aa19.95■□□□□ 0.78
RPE-208ENST00000436630 RNF17Q9BXT8 1623 aaKnown RBP19.94■□□□□ 0.78
RPE-208ENST00000436630 YEATS2Q9ULM3 1422 aa19.94■□□□□ 0.78
RPE-208ENST00000436630 ATP10AO60312 1499 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms