RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 KDM4FA0A1W2PPD8 638 aa34■■■■□ 3.03
SDHAP3-201ENST00000436493 RICTORQ6R327 1708 aa33.99■■■■□ 3.03
SDHAP3-201ENST00000436493 PREX2Q70Z35 1606 aa33.98■■■■□ 3.03
SDHAP3-201ENST00000436493 CDC42BPBQ9Y5S2 1711 aa33.98■■■■□ 3.03
SDHAP3-201ENST00000436493 EHBP1L1Q8N3D4 1523 aa33.96■■■■□ 3.03
SDHAP3-201ENST00000436493 CCNB3Q8WWL7 1395 aa33.95■■■■□ 3.02
SDHAP3-201ENST00000436493 POGZQ7Z3K3 1410 aa33.94■■■■□ 3.02
SDHAP3-201ENST00000436493 CDC42BPAQ5VT25 1732 aa33.93■■■■□ 3.02
SDHAP3-201ENST00000436493 TIAM1Q13009 1591 aa33.91■■■■□ 3.02
SDHAP3-201ENST00000436493 GPATCH8Q9UKJ3 1502 aaKnown RBP33.91■■■■□ 3.02
SDHAP3-201ENST00000436493 ZNF777Q9ULD5 760 aaPredicted RBP33.9■■■■□ 3.02
SDHAP3-201ENST00000436493 ZMYM4Q5VZL5 1548 aa33.89■■■■□ 3.02
SDHAP3-201ENST00000436493 CFDP1Q9UEE9 299 aaPredicted RBP33.88■■■■□ 3.01
SDHAP3-201ENST00000436493 MAGI2Q86UL8 1455 aa33.87■■■■□ 3.01
SDHAP3-201ENST00000436493 ZNF518AQ6AHZ1 1483 aa33.85■■■■□ 3.01
SDHAP3-201ENST00000436493 AFAP1Q8N556 730 aa33.84■■■■□ 3.01
SDHAP3-201ENST00000436493 ZFYVE16Q7Z3T8 1539 aa33.84■■■■□ 3.01
SDHAP3-201ENST00000436493 ARHGEF40Q8TER5 1519 aa33.84■■■■□ 3.01
SDHAP3-201ENST00000436493 APLP2Q06481 763 aa33.83■■■■□ 3.01
SDHAP3-201ENST00000436493 ARID4BQ4LE39 1312 aaPredicted RBP33.82■■■■□ 3.01
SDHAP3-201ENST00000436493 MYT1LQ9UL68 1186 aa33.82■■■■□ 3
SDHAP3-201ENST00000436493 ABCC1P33527 1531 aa33.81■■■■□ 3
SDHAP3-201ENST00000436493 MAP3K1Q13233 1512 aa33.81■■■■□ 3
SDHAP3-201ENST00000436493 YEATS2Q9ULM3 1422 aa33.79■■■■□ 3
SDHAP3-201ENST00000436493 SUPT6HQ7KZ85 1726 aaKnown RBP33.79■■■■□ 3
SDHAP3-201ENST00000436493 LRRC9Q6ZRR7 1453 aa33.78■■■■□ 3
SDHAP3-201ENST00000436493 ARHGEF12Q9NZN5 1544 aa33.77■■■■□ 3
SDHAP3-201ENST00000436493 NCOA2Q15596 1464 aa33.76■■■■□ 3
SDHAP3-201ENST00000436493 TRAPPC8Q9Y2L5 1435 aa33.75■■■□□ 2.99
SDHAP3-201ENST00000436493 SAMD9LQ8IVG5 1584 aa33.75■■■□□ 2.99
SDHAP3-201ENST00000436493 ITSN2Q9NZM3 1697 aa33.74■■■□□ 2.99
SDHAP3-201ENST00000436493 KDM5CP41229 1560 aa33.74■■■□□ 2.99
SDHAP3-201ENST00000436493 PLEKHH2Q8IVE3 1493 aa33.74■■■□□ 2.99
SDHAP3-201ENST00000436493 HNRNPMP52272 730 aaKnown RBP eCLIP33.73■■■□□ 2.99
SDHAP3-201ENST00000436493 KANK4Q5T7N3 995 aaPredicted RBP33.73■■■□□ 2.99
SDHAP3-201ENST00000436493 KIAA1107Q9UPP5 1409 aa33.7■■■□□ 2.98
SDHAP3-201ENST00000436493 ATP10AO60312 1499 aa33.69■■■□□ 2.98
SDHAP3-201ENST00000436493 SYCP2Q9BX26 1530 aa33.69■■■□□ 2.98
SDHAP3-201ENST00000436493 HECW2Q9P2P5 1572 aa33.68■■■□□ 2.98
SDHAP3-201ENST00000436493 MLH3Q9UHC1 1453 aa33.67■■■□□ 2.98
SDHAP3-201ENST00000436493 ZNF644Q9H582 1327 aaPredicted RBP33.65■■■□□ 2.98
SDHAP3-201ENST00000436493 C9orf84Q5VXU9 1444 aa33.63■■■□□ 2.97
SDHAP3-201ENST00000436493 BCORL1Q5H9F3 1711 aa33.62■■■□□ 2.97
SDHAP3-201ENST00000436493 SPAG9O60271 1321 aaKnown RBP33.61■■■□□ 2.97
SDHAP3-201ENST00000436493 ADAMTSL3P82987 1691 aa33.58■■■□□ 2.97
SDHAP3-201ENST00000436493 DIP2CQ9Y2E4 1556 aa33.56■■■□□ 2.96
SDHAP3-201ENST00000436493 MLECQ14165 292 aa33.56■■■□□ 2.96
SDHAP3-201ENST00000436493 ABCA6Q8N139 1617 aa33.53■■■□□ 2.96
SDHAP3-201ENST00000436493 KIDINS220Q9ULH0 1771 aa33.53■■■□□ 2.96
SDHAP3-201ENST00000436493 SIGLEC1Q9BZZ2 1709 aa33.53■■■□□ 2.96
SDHAP3-201ENST00000436493 CAMSAP2Q08AD1 1489 aa33.52■■■□□ 2.96
SDHAP3-201ENST00000436493 MBD5Q9P267 1494 aa33.5■■■□□ 2.95
SDHAP3-201ENST00000436493 RSPH4AQ5TD94 716 aa33.49■■■□□ 2.95
SDHAP3-201ENST00000436493 MYOM3Q5VTT5 1437 aa33.49■■■□□ 2.95
SDHAP3-201ENST00000436493 MADDQ8WXG6 1647 aa33.48■■■□□ 2.95
SDHAP3-201ENST00000436493 REREQ9P2R6 1566 aa33.47■■■□□ 2.95
SDHAP3-201ENST00000436493 ATP7AQ04656 1500 aa33.47■■■□□ 2.95
SDHAP3-201ENST00000436493 PTPRMP28827 1452 aa33.46■■■□□ 2.95
SDHAP3-201ENST00000436493 MIA2Q96PC5 1412 aa33.45■■■□□ 2.94
SDHAP3-201ENST00000436493 CCDC141Q6ZP82 1450 aa33.43■■■□□ 2.94
SDHAP3-201ENST00000436493 INO80Q9ULG1 1556 aaPredicted RBP33.43■■■□□ 2.94
SDHAP3-201ENST00000436493 RIMS1Q86UR5 1692 aaKnown RBP33.4■■■□□ 2.94
SDHAP3-201ENST00000436493 AGLP35573 1532 aa33.39■■■□□ 2.94
SDHAP3-201ENST00000436493 RTEL1-TNFRSF6BF6WH68 1400 aa33.38■■■□□ 2.93
SDHAP3-201ENST00000436493 TSPY4P0CV99 314 aa33.38■■■□□ 2.93
SDHAP3-201ENST00000436493 TSPY10P0CW01 314 aa33.38■■■□□ 2.93
SDHAP3-201ENST00000436493 ARHGEF5Q12774 1597 aa33.36■■■□□ 2.93
SDHAP3-201ENST00000436493 FER1L4A9Z1Z3 1794 aa33.35■■■□□ 2.93
SDHAP3-201ENST00000436493 A2MP01023 1474 aa33.34■■■□□ 2.93
SDHAP3-201ENST00000436493 PLPPR3Q6T4P5 718 aa33.33■■■□□ 2.93
SDHAP3-201ENST00000436493 ESF1Q9H501 851 aaKnown RBP33.32■■■□□ 2.92
SDHAP3-201ENST00000436493 ADGBQ8N7X0 1667 aa33.29■■■□□ 2.92
SDHAP3-201ENST00000436493 FGD6Q6ZV73 1430 aa33.27■■■□□ 2.92
SDHAP3-201ENST00000436493 PTPN23Q9H3S7 1636 aa33.26■■■□□ 2.91
SDHAP3-201ENST00000436493 PLXNC1O60486 1568 aa33.24■■■□□ 2.91
SDHAP3-201ENST00000436493 DHX29Q7Z478 1369 aaKnown RBP33.23■■■□□ 2.91
SDHAP3-201ENST00000436493 GGT6Q6P531 493 aa33.19■■■□□ 2.9
SDHAP3-201ENST00000436493 TCOF1Q13428 1488 aaKnown RBP33.18■■■□□ 2.9
SDHAP3-201ENST00000436493 MAST1Q9Y2H9 1570 aa33.17■■■□□ 2.9
SDHAP3-201ENST00000436493 CEBPAP49715 358 aaPredicted RBP33.17■■■□□ 2.9
SDHAP3-201ENST00000436493 CNTLNQ9NXG0 1405 aa33.16■■■□□ 2.9
SDHAP3-201ENST00000436493 PPARGC1BQ86YN6 1023 aaKnown RBP33.14■■■□□ 2.9
SDHAP3-201ENST00000436493 KIF3BO15066 747 aa33.13■■■□□ 2.89
SDHAP3-201ENST00000436493 FAM50AQ14320 339 aaKnown RBP33.13■■■□□ 2.89
SDHAP3-201ENST00000436493 ABCC5O15440 1437 aa33.12■■■□□ 2.89
SDHAP3-201ENST00000436493 PPP6R1Q9UPN7 881 aa33.11■■■□□ 2.89
SDHAP3-201ENST00000436493 DAPK1P53355 1430 aa33.1■■■□□ 2.89
SDHAP3-201ENST00000436493 SHANK2Q9UPX8 1470 aa33.08■■■□□ 2.89
SDHAP3-201ENST00000436493 DNMT1P26358 1616 aaKnown RBP33.07■■■□□ 2.88
SDHAP3-201ENST00000436493 CROCC2H7BZ55 1655 aa33.05■■■□□ 2.88
SDHAP3-201ENST00000436493 C3P01024 1663 aa33.04■■■□□ 2.88
SDHAP3-201ENST00000436493 ZMYM3Q14202 1370 aa33.02■■■□□ 2.88
SDHAP3-201ENST00000436493 CHIC2Q9UKJ5 165 aa33.02■■■□□ 2.88
SDHAP3-201ENST00000436493 LMTK3Q96Q04 1460 aa33.01■■■□□ 2.88
SDHAP3-201ENST00000436493 RRP7BPQ9NSQ0 103 aa33.01■■■□□ 2.87
SDHAP3-201ENST00000436493 MROH2AA6NES4 1674 aa33.01■■■□□ 2.87
SDHAP3-201ENST00000436493 CLTCQ00610 1675 aaKnown RBP33■■■□□ 2.87
SDHAP3-201ENST00000436493 KIF15Q9NS87 1388 aa32.99■■■□□ 2.87
SDHAP3-201ENST00000436493 DUOX2Q9NRD8 1548 aa32.99■■■□□ 2.87
SDHAP3-201ENST00000436493 SETD1BQ9UPS6 1966 aaKnown RBP32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms