RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 EIF4G3O43432 1585 aaKnown RBP14.62□□□□□ -0.07
CLSTN1-203ENST00000435891 ABCC5O15440 1437 aa14.62□□□□□ -0.07
CLSTN1-203ENST00000435891 WASHC2AQ641Q2 1341 aa14.62□□□□□ -0.07
CLSTN1-203ENST00000435891 FKBP8Q14318 412 aa14.6□□□□□ -0.07
CLSTN1-203ENST00000435891 PRG4Q92954 1404 aaPredicted RBP14.6□□□□□ -0.07
CLSTN1-203ENST00000435891 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
CLSTN1-203ENST00000435891 FBLN2P98095 1184 aa14.58□□□□□ -0.07
CLSTN1-203ENST00000435891 PLB1Q6P1J6 1458 aa14.58□□□□□ -0.08
CLSTN1-203ENST00000435891 C11orf95C9JLR9 678 aaPredicted RBP14.57□□□□□ -0.08
CLSTN1-203ENST00000435891 DNMT1P26358 1616 aaKnown RBP14.57□□□□□ -0.08
CLSTN1-203ENST00000435891 ANKRD30BQ9BXX2 1392 aa14.56□□□□□ -0.08
CLSTN1-203ENST00000435891 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
CLSTN1-203ENST00000435891 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
CLSTN1-203ENST00000435891 ROCK1Q13464 1354 aa14.56□□□□□ -0.08
CLSTN1-203ENST00000435891 TSHZ2Q9NRE2 1034 aa14.56□□□□□ -0.08
CLSTN1-203ENST00000435891 CEP170Q5SW79 1584 aa14.56□□□□□ -0.08
CLSTN1-203ENST00000435891 EIF4G2P78344 907 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLSTN1-203ENST00000435891 ERCC6Q03468 1493 aa14.55□□□□□ -0.08
CLSTN1-203ENST00000435891 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
CLSTN1-203ENST00000435891 CDK11AQ9UQ88 783 aaPredicted RBP14.54□□□□□ -0.08
CLSTN1-203ENST00000435891 ZNF777Q9ULD5 760 aaPredicted RBP14.53□□□□□ -0.08
CLSTN1-203ENST00000435891 TROQ12816 1431 aaPredicted RBP14.53□□□□□ -0.08
CLSTN1-203ENST00000435891 CFDP1Q9UEE9 299 aaPredicted RBP14.53□□□□□ -0.08
CLSTN1-203ENST00000435891 RPRD2Q5VT52 1461 aaKnown RBP14.52□□□□□ -0.08
CLSTN1-203ENST00000435891 CCDC184Q52MB2 194 aa14.52□□□□□ -0.09
CLSTN1-203ENST00000435891 KIF14Q15058 1648 aa14.52□□□□□ -0.09
CLSTN1-203ENST00000435891 ERICH6Q7L0X2 663 aa14.52□□□□□ -0.09
CLSTN1-203ENST00000435891 TEX14Q8IWB6 1497 aa14.51□□□□□ -0.09
CLSTN1-203ENST00000435891 CAMSAP2Q08AD1 1489 aa14.51□□□□□ -0.09
CLSTN1-203ENST00000435891 GPATCH8Q9UKJ3 1502 aaKnown RBP14.51□□□□□ -0.09
CLSTN1-203ENST00000435891 MAGI1Q96QZ7 1491 aaPredicted RBP14.5□□□□□ -0.09
CLSTN1-203ENST00000435891 JPH4Q96JJ6 628 aa14.5□□□□□ -0.09
CLSTN1-203ENST00000435891 SYNJ2O15056 1496 aa14.5□□□□□ -0.09
CLSTN1-203ENST00000435891 HNRNPUQ00839 825 aaKnown RBP eCLIP14.49□□□□□ -0.09
CLSTN1-203ENST00000435891 NCOA1Q15788 1441 aa14.49□□□□□ -0.09
CLSTN1-203ENST00000435891 PZPP20742 1482 aa14.49□□□□□ -0.09
CLSTN1-203ENST00000435891 CCDC7Q96M83 1385 aa14.47□□□□□ -0.09
CLSTN1-203ENST00000435891 CNTLNQ9NXG0 1405 aa14.46□□□□□ -0.09
CLSTN1-203ENST00000435891 NUP160Q12769 1436 aa14.45□□□□□ -0.1
CLSTN1-203ENST00000435891 NEFLP07196 543 aa14.45□□□□□ -0.1
CLSTN1-203ENST00000435891 SPATA31E1Q6ZUB1 1445 aa14.44□□□□□ -0.1
CLSTN1-203ENST00000435891 CARMIL2Q6F5E8 1435 aa14.43□□□□□ -0.1
CLSTN1-203ENST00000435891 KIF7Q2M1P5 1343 aa14.43□□□□□ -0.1
CLSTN1-203ENST00000435891 PRKRIP1Q9H875 184 aaPredicted RBP14.43□□□□□ -0.1
CLSTN1-203ENST00000435891 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
CLSTN1-203ENST00000435891 PKD2Q13563 968 aa14.42□□□□□ -0.1
CLSTN1-203ENST00000435891 ADCY10Q96PN6 1610 aa14.41□□□□□ -0.1
CLSTN1-203ENST00000435891 ZNF326Q5BKZ1 582 aaKnown RBP14.41□□□□□ -0.1
CLSTN1-203ENST00000435891 IRX6P78412 446 aaPredicted RBP14.41□□□□□ -0.1
CLSTN1-203ENST00000435891 ATP10BO94823 1461 aa14.4□□□□□ -0.1
CLSTN1-203ENST00000435891 ADGRL2O95490 1459 aa14.4□□□□□ -0.1
CLSTN1-203ENST00000435891 ADGBQ8N7X0 1667 aa14.4□□□□□ -0.1
CLSTN1-203ENST00000435891 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
CLSTN1-203ENST00000435891 KIAA1107Q9UPP5 1409 aa14.39□□□□□ -0.11
CLSTN1-203ENST00000435891 CROCC2H7BZ55 1655 aa14.39□□□□□ -0.11
CLSTN1-203ENST00000435891 ANKRD50Q9ULJ7 1429 aa14.39□□□□□ -0.11
CLSTN1-203ENST00000435891 FAM9BQ8IZU0 186 aa14.39□□□□□ -0.11
CLSTN1-203ENST00000435891 ANKRD30AQ9BXX3 1397 aa14.38□□□□□ -0.11
CLSTN1-203ENST00000435891 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
CLSTN1-203ENST00000435891 ABCA8O94911 1581 aa14.38□□□□□ -0.11
CLSTN1-203ENST00000435891 CDC42BPAQ5VT25 1732 aa14.38□□□□□ -0.11
CLSTN1-203ENST00000435891 CNGB1Q14028 1251 aaPredicted RBP14.37□□□□□ -0.11
CLSTN1-203ENST00000435891 MBD5Q9P267 1494 aa14.37□□□□□ -0.11
CLSTN1-203ENST00000435891 MRS2Q9HD23 443 aa14.37□□□□□ -0.11
CLSTN1-203ENST00000435891 HNRNPMP52272 730 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLSTN1-203ENST00000435891 NUP155O75694 1391 aa14.35□□□□□ -0.11
CLSTN1-203ENST00000435891 C9orf84Q5VXU9 1444 aa14.35□□□□□ -0.11
CLSTN1-203ENST00000435891 POLR3GLQ9BT43 218 aa14.34□□□□□ -0.11
CLSTN1-203ENST00000435891 USP47Q96K76 1375 aa14.33□□□□□ -0.12
CLSTN1-203ENST00000435891 BCORL1Q5H9F3 1711 aa14.33□□□□□ -0.12
CLSTN1-203ENST00000435891 POLR1AO95602 1720 aaPredicted RBP14.31□□□□□ -0.12
CLSTN1-203ENST00000435891 DHX29Q7Z478 1369 aaKnown RBP14.3□□□□□ -0.12
CLSTN1-203ENST00000435891 TSPY4P0CV99 314 aa14.3□□□□□ -0.12
CLSTN1-203ENST00000435891 TSPY10P0CW01 314 aa14.3□□□□□ -0.12
CLSTN1-203ENST00000435891 KIF15Q9NS87 1388 aa14.29□□□□□ -0.12
CLSTN1-203ENST00000435891 KDM2AQ9Y2K7 1162 aa14.29□□□□□ -0.12
CLSTN1-203ENST00000435891 PTPRGP23470 1445 aa14.29□□□□□ -0.12
CLSTN1-203ENST00000435891 SHANK2Q9UPX8 1470 aa14.29□□□□□ -0.12
CLSTN1-203ENST00000435891 RBM19Q9Y4C8 960 aaKnown RBP14.28□□□□□ -0.12
CLSTN1-203ENST00000435891 KDM5CP41229 1560 aa14.27□□□□□ -0.12
CLSTN1-203ENST00000435891 SENP3-EIF4A1A0A087X0R7 540 aa14.27□□□□□ -0.13
CLSTN1-203ENST00000435891 ZBED9Q6R2W3 1325 aa14.25□□□□□ -0.13
CLSTN1-203ENST00000435891 CARD11Q9BXL7 1154 aa14.25□□□□□ -0.13
CLSTN1-203ENST00000435891 SAMD9LQ8IVG5 1584 aa14.25□□□□□ -0.13
CLSTN1-203ENST00000435891 UHRF1BP1Q6BDS2 1440 aa14.24□□□□□ -0.13
CLSTN1-203ENST00000435891 DCAF11Q8TEB1 546 aa14.24□□□□□ -0.13
CLSTN1-203ENST00000435891 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
CLSTN1-203ENST00000435891 RALGAPBQ86X10 1494 aa14.23□□□□□ -0.13
CLSTN1-203ENST00000435891 ANO8Q9HCE9 1232 aaPredicted RBP14.23□□□□□ -0.13
CLSTN1-203ENST00000435891 KDM5DQ9BY66 1539 aa14.23□□□□□ -0.13
CLSTN1-203ENST00000435891 ST20-MTHFSA0A0A6YYL1 179 aa14.23□□□□□ -0.13
CLSTN1-203ENST00000435891 ARHGEF5Q12774 1597 aa14.22□□□□□ -0.13
CLSTN1-203ENST00000435891 CCDC141Q6ZP82 1450 aa14.21□□□□□ -0.13
CLSTN1-203ENST00000435891 PREX2Q70Z35 1606 aa14.19□□□□□ -0.14
CLSTN1-203ENST00000435891 ERCC6L2Q5T890 1561 aa14.19□□□□□ -0.14
CLSTN1-203ENST00000435891 SYCP2Q9BX26 1530 aa14.19□□□□□ -0.14
CLSTN1-203ENST00000435891 ARHGEF12Q9NZN5 1544 aa14.19□□□□□ -0.14
CLSTN1-203ENST00000435891 FAM135AQ9P2D6 1515 aa14.19□□□□□ -0.14
CLSTN1-203ENST00000435891 TTC37Q6PGP7 1564 aa14.19□□□□□ -0.14
CLSTN1-203ENST00000435891 RGL3Q3MIN7 710 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms