RNA–Protein interactions for RNA: ENST00000435753.6

DDX11-204, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 4,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-204ENST00000435753 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
DDX11-204ENST00000435753 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
DDX11-204ENST00000435753 NUP155O75694 1391 aa13.61□□□□□ -0.23
DDX11-204ENST00000435753 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
DDX11-204ENST00000435753 NUDCQ9Y266 331 aa13.58□□□□□ -0.24
DDX11-204ENST00000435753 KNSTRNQ9Y448 316 aa13.58□□□□□ -0.24
DDX11-204ENST00000435753 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
DDX11-204ENST00000435753 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
DDX11-204ENST00000435753 ZNF644Q9H582 1327 aaPredicted RBP13.57□□□□□ -0.24
DDX11-204ENST00000435753 ANKRD30AQ9BXX3 1397 aa13.57□□□□□ -0.24
DDX11-204ENST00000435753 ESF1Q9H501 851 aaKnown RBP13.56□□□□□ -0.24
DDX11-204ENST00000435753 ZBED9Q6R2W3 1325 aa13.56□□□□□ -0.24
DDX11-204ENST00000435753 HFM1A2PYH4 1435 aa13.55□□□□□ -0.24
DDX11-204ENST00000435753 CCDC7Q96M83 1385 aa13.55□□□□□ -0.24
DDX11-204ENST00000435753 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
DDX11-204ENST00000435753 POLA1P09884 1462 aaPredicted RBP13.54□□□□□ -0.24
DDX11-204ENST00000435753 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.243e-7■■■■■ 36.3
DDX11-204ENST00000435753 EFCAB5A4FU69 1503 aa13.53□□□□□ -0.24
DDX11-204ENST00000435753 LAS1LQ9Y4W2 734 aaKnown RBP13.53□□□□□ -0.24
DDX11-204ENST00000435753 IFT140Q96RY7 1462 aa13.53□□□□□ -0.24
DDX11-204ENST00000435753 KIF7Q2M1P5 1343 aa13.53□□□□□ -0.24
DDX11-204ENST00000435753 ST20-MTHFSA0A0A6YYL1 179 aa13.53□□□□□ -0.24
DDX11-204ENST00000435753 PCF11O94913 1555 aaKnown RBP13.53□□□□□ -0.24
DDX11-204ENST00000435753 ROCK2O75116 1388 aaKnown RBP13.52□□□□□ -0.24
DDX11-204ENST00000435753 HNRNPMP52272 730 aaKnown RBP eCLIP13.52□□□□□ -0.25
DDX11-204ENST00000435753 TMF1P82094 1093 aa13.52□□□□□ -0.25
DDX11-204ENST00000435753 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.25
DDX11-204ENST00000435753 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
DDX11-204ENST00000435753 RCAN3Q9UKA8 241 aa13.52□□□□□ -0.25
DDX11-204ENST00000435753 TOPBP1Q92547 1522 aa13.52□□□□□ -0.25
DDX11-204ENST00000435753 JPH4Q96JJ6 628 aa13.52□□□□□ -0.25
DDX11-204ENST00000435753 CARMIL2Q6F5E8 1435 aa13.51□□□□□ -0.25
DDX11-204ENST00000435753 CNTLNQ9NXG0 1405 aa13.51□□□□□ -0.25
DDX11-204ENST00000435753 MAP3K1Q13233 1512 aa13.51□□□□□ -0.25
DDX11-204ENST00000435753 USP47Q96K76 1375 aa13.51□□□□□ -0.25
DDX11-204ENST00000435753 RALBP1Q15311 655 aa13.51□□□□□ -0.25
DDX11-204ENST00000435753 KTN1Q86UP2 1357 aaKnown RBP13.51□□□□□ -0.25
DDX11-204ENST00000435753 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDX11-204ENST00000435753 DEKP35659 375 aaKnown RBP13.5□□□□□ -0.25
DDX11-204ENST00000435753 CDCA8Q53HL2 280 aa13.5□□□□□ -0.25
DDX11-204ENST00000435753 NAIPQ13075 1403 aa13.5□□□□□ -0.25
DDX11-204ENST00000435753 CCDC184Q52MB2 194 aa13.5□□□□□ -0.25
DDX11-204ENST00000435753 DDRGK1Q96HY6 314 aa13.49□□□□□ -0.25
DDX11-204ENST00000435753 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
DDX11-204ENST00000435753 MAPKBP1O60336 1514 aa13.49□□□□□ -0.25
DDX11-204ENST00000435753 NEFMP07197 916 aa13.49□□□□□ -0.25
DDX11-204ENST00000435753 RGS3P49796 1198 aa13.48□□□□□ -0.25
DDX11-204ENST00000435753 NBPF8Q3BBV2 869 aa13.48□□□□□ -0.25
DDX11-204ENST00000435753 FANCIQ9NVI1 1328 aa13.48□□□□□ -0.25
DDX11-204ENST00000435753 NLRP13Q86W25 1043 aa13.46□□□□□ -0.25
DDX11-204ENST00000435753 NEUROD2Q15784 382 aa13.46□□□□□ -0.25
DDX11-204ENST00000435753 SENP3Q9H4L4 574 aaPredicted RBP13.46□□□□□ -0.26
DDX11-204ENST00000435753 KIF15Q9NS87 1388 aa13.44□□□□□ -0.26
DDX11-204ENST00000435753 PPM1GO15355 546 aaPredicted RBP13.44□□□□□ -0.26
DDX11-204ENST00000435753 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
DDX11-204ENST00000435753 MYBBP1AQ9BQG0 1328 aaKnown RBP13.44□□□□□ -0.26
DDX11-204ENST00000435753 ARID4BQ4LE39 1312 aaPredicted RBP13.43□□□□□ -0.26
DDX11-204ENST00000435753 DNMBPQ6XZF7 1577 aa13.43□□□□□ -0.26
DDX11-204ENST00000435753 EHBP1L1Q8N3D4 1523 aa13.43□□□□□ -0.26
DDX11-204ENST00000435753 IPO9Q96P70 1041 aaKnown RBP13.42□□□□□ -0.26
DDX11-204ENST00000435753 TNNT2P45379 298 aaPredicted RBP13.42□□□□□ -0.26
DDX11-204ENST00000435753 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
DDX11-204ENST00000435753 GRIN2BQ13224 1484 aa13.4□□□□□ -0.26
DDX11-204ENST00000435753 C11orf95C9JLR9 678 aaPredicted RBP13.4□□□□□ -0.26
DDX11-204ENST00000435753 EXOC6Q8TAG9 804 aa13.4□□□□□ -0.26
DDX11-204ENST00000435753 FRAT1Q92837 279 aaPredicted RBP13.39□□□□□ -0.27
DDX11-204ENST00000435753 ARXQ96QS3 562 aa13.39□□□□□ -0.27
DDX11-204ENST00000435753 PDE3BQ13370 1112 aa13.39□□□□□ -0.27
DDX11-204ENST00000435753 ANO8Q9HCE9 1232 aaPredicted RBP13.39□□□□□ -0.27
DDX11-204ENST00000435753 MIA2Q96PC5 1412 aa13.38□□□□□ -0.27
DDX11-204ENST00000435753 SUPT6HQ7KZ85 1726 aaKnown RBP13.38□□□□□ -0.27
DDX11-204ENST00000435753 PLIN1O60240 522 aa13.37□□□□□ -0.27
DDX11-204ENST00000435753 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
DDX11-204ENST00000435753 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
DDX11-204ENST00000435753 PANK3Q9H999 370 aa13.37□□□□□ -0.27
DDX11-204ENST00000435753 PRDM2Q13029 1718 aa13.37□□□□□ -0.27
DDX11-204ENST00000435753 CCDC144AA2RUR9 1427 aa13.37□□□□□ -0.27
DDX11-204ENST00000435753 PTPRKQ15262 1439 aa13.36□□□□□ -0.27
DDX11-204ENST00000435753 ANKRD50Q9ULJ7 1429 aa13.36□□□□□ -0.27
DDX11-204ENST00000435753 HSP90AA1P07900 732 aaKnown RBP13.35□□□□□ -0.27
DDX11-204ENST00000435753 RSPH4AQ5TD94 716 aa13.35□□□□□ -0.27
DDX11-204ENST00000435753 FAM69CQ0P6D2 419 aa13.35□□□□□ -0.27
DDX11-204ENST00000435753 CFAP53Q96M91 514 aa13.35□□□□□ -0.27
DDX11-204ENST00000435753 CDK13Q14004 1512 aaKnown RBP13.35□□□□□ -0.27
DDX11-204ENST00000435753 BECN1Q14457 450 aa13.34□□□□□ -0.27
DDX11-204ENST00000435753 PODXL2Q9NZ53 605 aa13.34□□□□□ -0.27
DDX11-204ENST00000435753 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
DDX11-204ENST00000435753 AKNAQ7Z591 1439 aa13.33□□□□□ -0.28
DDX11-204ENST00000435753 EFCAB2Q5VUJ9 269 aa13.33□□□□□ -0.28
DDX11-204ENST00000435753 PTPN23Q9H3S7 1636 aa13.32□□□□□ -0.28
DDX11-204ENST00000435753 DAPK1P53355 1430 aa13.32□□□□□ -0.28
DDX11-204ENST00000435753 PDE4AP27815 886 aa13.32□□□□□ -0.28
DDX11-204ENST00000435753 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
DDX11-204ENST00000435753 CUL7Q14999 1698 aa13.32□□□□□ -0.28
DDX11-204ENST00000435753 PTPRGP23470 1445 aa13.32□□□□□ -0.28
DDX11-204ENST00000435753 PRG4Q92954 1404 aaPredicted RBP13.31□□□□□ -0.28
DDX11-204ENST00000435753 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
DDX11-204ENST00000435753 CCDC146Q8IYE0 955 aa13.31□□□□□ -0.28
DDX11-204ENST00000435753 HECW1Q76N89 1606 aa13.31□□□□□ -0.28
DDX11-204ENST00000435753 ANKRD30BQ9BXX2 1392 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 304.6 ms