RNA–Protein interactions for RNA: ENST00000435753.6

DDX11-204, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 4,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-204ENST00000435753 NISCHQ9Y2I1 1504 aa19.06■□□□□ 0.64
DDX11-204ENST00000435753 DCAF8L2P0C7V8 631 aa17.7■□□□□ 0.42
DDX11-204ENST00000435753 SUPT5HO00267 1087 aaKnown RBP17.54■□□□□ 0.4
DDX11-204ENST00000435753 SHROOM4Q9ULL8 1493 aa17.51■□□□□ 0.39
DDX11-204ENST00000435753 PCGF6Q9BYE7 350 aa16.63■□□□□ 0.25
DDX11-204ENST00000435753 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
DDX11-204ENST00000435753 ABCC9O60706 1549 aa16.43■□□□□ 0.22
DDX11-204ENST00000435753 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
DDX11-204ENST00000435753 FAM9AQ8IZU1 332 aaPredicted RBP16.38■□□□□ 0.21
DDX11-204ENST00000435753 HRCP23327 699 aa16.26■□□□□ 0.19
DDX11-204ENST00000435753 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
DDX11-204ENST00000435753 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
DDX11-204ENST00000435753 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
DDX11-204ENST00000435753 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
DDX11-204ENST00000435753 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
DDX11-204ENST00000435753 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
DDX11-204ENST00000435753 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
DDX11-204ENST00000435753 MYT1Q01538 1121 aa16■□□□□ 0.15
DDX11-204ENST00000435753 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
DDX11-204ENST00000435753 CCER1Q8TC90 406 aaPredicted RBP15.86■□□□□ 0.13
DDX11-204ENST00000435753 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
DDX11-204ENST00000435753 PABPN1Q86U42 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
DDX11-204ENST00000435753 APLP2Q06481 763 aa15.76■□□□□ 0.11
DDX11-204ENST00000435753 CCDC180Q9P1Z9 1646 aa15.71■□□□□ 0.11
DDX11-204ENST00000435753 UBTFP17480 764 aaKnown RBP15.71■□□□□ 0.11
DDX11-204ENST00000435753 RANGAP1P46060 587 aaPredicted RBP15.66■□□□□ 0.1
DDX11-204ENST00000435753 CENPBP07199 599 aaPredicted RBP15.61■□□□□ 0.09
DDX11-204ENST00000435753 DCAF1Q9Y4B6 1507 aa15.55■□□□□ 0.08
DDX11-204ENST00000435753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
DDX11-204ENST00000435753 YTHDC1Q96MU7 727 aaKnown RBP15.44■□□□□ 0.06
DDX11-204ENST00000435753 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
DDX11-204ENST00000435753 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
DDX11-204ENST00000435753 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
DDX11-204ENST00000435753 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
DDX11-204ENST00000435753 RSF1Q96T23 1441 aaPredicted RBP15.3■□□□□ 0.04
DDX11-204ENST00000435753 ATP1B4Q9UN42 357 aaPredicted RBP15.23■□□□□ 0.03
DDX11-204ENST00000435753 NACADO15069 1562 aa15.22■□□□□ 0.03
DDX11-204ENST00000435753 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
DDX11-204ENST00000435753 ITGAEP38570 1179 aa15.15■□□□□ 0.02
DDX11-204ENST00000435753 GTF3C3Q9Y5Q9 886 aa15.1■□□□□ 0.01
DDX11-204ENST00000435753 ACIN1Q9UKV3 1341 aaKnown RBP15.07■□□□□ 0
DDX11-204ENST00000435753 ZNF316A6NFI3 1004 aaPredicted RBP15.04■□□□□ -0
DDX11-204ENST00000435753 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
DDX11-204ENST00000435753 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
DDX11-204ENST00000435753 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
DDX11-204ENST00000435753 NEFLP07196 543 aa14.9□□□□□ -0.02
DDX11-204ENST00000435753 ERICH6Q7L0X2 663 aa14.89□□□□□ -0.03
DDX11-204ENST00000435753 CEP162Q5TB80 1403 aa14.87□□□□□ -0.03
DDX11-204ENST00000435753 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
DDX11-204ENST00000435753 FAM50AQ14320 339 aaKnown RBP14.81□□□□□ -0.04
DDX11-204ENST00000435753 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
DDX11-204ENST00000435753 TNIKQ9UKE5 1360 aa14.77□□□□□ -0.05
DDX11-204ENST00000435753 EEA1Q15075 1411 aa14.76□□□□□ -0.05
DDX11-204ENST00000435753 CLIP1P30622 1438 aa14.75□□□□□ -0.05
DDX11-204ENST00000435753 SOGA1O94964 1423 aa14.73□□□□□ -0.05
DDX11-204ENST00000435753 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
DDX11-204ENST00000435753 MIER1Q8N108 512 aa14.73□□□□□ -0.05
DDX11-204ENST00000435753 WRNQ14191 1432 aaPredicted RBP eCLIP14.71□□□□□ -0.05
DDX11-204ENST00000435753 WIZO95785 1651 aa14.7□□□□□ -0.06
DDX11-204ENST00000435753 ABCC8Q09428 1581 aa14.69□□□□□ -0.06
DDX11-204ENST00000435753 P3H3Q8IVL6 736 aa14.68□□□□□ -0.06
DDX11-204ENST00000435753 CCDC88BA6NC98 1476 aa14.68□□□□□ -0.06
DDX11-204ENST00000435753 BCANQ96GW7 911 aa14.64□□□□□ -0.07
DDX11-204ENST00000435753 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
DDX11-204ENST00000435753 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
DDX11-204ENST00000435753 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
DDX11-204ENST00000435753 CNGB1Q14028 1251 aaPredicted RBP14.57□□□□□ -0.08
DDX11-204ENST00000435753 POLR3GLQ9BT43 218 aa14.56□□□□□ -0.08
DDX11-204ENST00000435753 ANP32CO43423 234 aa14.55□□□□□ -0.08
DDX11-204ENST00000435753 FBLN2P98095 1184 aa14.55□□□□□ -0.08
DDX11-204ENST00000435753 TRIM52Q96A61 297 aa14.53□□□□□ -0.08
DDX11-204ENST00000435753 BAZ1BQ9UIG0 1483 aaKnown RBP14.53□□□□□ -0.08
DDX11-204ENST00000435753 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
DDX11-204ENST00000435753 DDX10Q13206 875 aaKnown RBP14.51□□□□□ -0.09
DDX11-204ENST00000435753 RUSC2Q8N2Y8 1516 aa14.47□□□□□ -0.09
DDX11-204ENST00000435753 VPS8Q8N3P4 1428 aa14.45□□□□□ -0.1
DDX11-204ENST00000435753 CLSPNQ9HAW4 1339 aa14.44□□□□□ -0.1
DDX11-204ENST00000435753 FKBP8Q14318 412 aa14.41□□□□□ -0.1
DDX11-204ENST00000435753 HIRIP3Q9BW71 556 aaPredicted RBP14.41□□□□□ -0.1
DDX11-204ENST00000435753 ARID3CA6NKF2 412 aa14.4□□□□□ -0.1
DDX11-204ENST00000435753 KIF27Q86VH2 1401 aa14.39□□□□□ -0.11
DDX11-204ENST00000435753 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
DDX11-204ENST00000435753 TONSLQ96HA7 1378 aa14.39□□□□□ -0.11
DDX11-204ENST00000435753 KANK4Q5T7N3 995 aaPredicted RBP14.37□□□□□ -0.11
DDX11-204ENST00000435753 BCL11AQ9H165 835 aa14.34□□□□□ -0.11
DDX11-204ENST00000435753 SMARCA2P51531 1590 aa14.32□□□□□ -0.12
DDX11-204ENST00000435753 ZNF326Q5BKZ1 582 aaKnown RBP14.32□□□□□ -0.12
DDX11-204ENST00000435753 CCNB3Q8WWL7 1395 aa14.31□□□□□ -0.12
DDX11-204ENST00000435753 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
DDX11-204ENST00000435753 SIN3AQ96ST3 1273 aa14.3□□□□□ -0.12
DDX11-204ENST00000435753 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
DDX11-204ENST00000435753 CHIC2Q9UKJ5 165 aa14.29□□□□□ -0.12
DDX11-204ENST00000435753 HNRNPUQ00839 825 aaKnown RBP eCLIP14.29□□□□□ -0.12
DDX11-204ENST00000435753 CDK11AQ9UQ88 783 aaPredicted RBP14.29□□□□□ -0.12
DDX11-204ENST00000435753 MTUS2Q5JR59 1369 aa14.28□□□□□ -0.12
DDX11-204ENST00000435753 PDS5BQ9NTI5 1447 aa14.26□□□□□ -0.13
DDX11-204ENST00000435753 SUPT16HQ9Y5B9 1047 aaKnown RBP14.24□□□□□ -0.13
DDX11-204ENST00000435753 ATAD2BQ9ULI0 1458 aa14.23□□□□□ -0.13
DDX11-204ENST00000435753 CC2D2AQ9P2K1 1620 aa14.22□□□□□ -0.13
DDX11-204ENST00000435753 EIF5BO60841 1220 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 1154.5 ms