RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 KCNH8Q96L42 1107 aa18.89■□□□□ 0.61
DDX56-204ENST00000431640 FGD6Q6ZV73 1430 aa18.88■□□□□ 0.61
DDX56-204ENST00000431640 ITGAEP38570 1179 aa18.88■□□□□ 0.61
DDX56-204ENST00000431640 KIF13AQ9H1H9 1805 aa18.87■□□□□ 0.61
DDX56-204ENST00000431640 FAM50AQ14320 339 aaKnown RBP18.86■□□□□ 0.61
DDX56-204ENST00000431640 PTPN23Q9H3S7 1636 aa18.86■□□□□ 0.61
DDX56-204ENST00000431640 SETD5Q9C0A6 1442 aa18.85■□□□□ 0.61
DDX56-204ENST00000431640 MAP3K4Q9Y6R4 1608 aa18.85■□□□□ 0.61
DDX56-204ENST00000431640 GLI2P10070 1586 aa18.85■□□□□ 0.61
DDX56-204ENST00000431640 SAMD9LQ8IVG5 1584 aa18.83■□□□□ 0.6
DDX56-204ENST00000431640 TCOF1Q13428 1488 aaKnown RBP18.82■□□□□ 0.6
DDX56-204ENST00000431640 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
DDX56-204ENST00000431640 PPRC1Q5VV67 1664 aaKnown RBP18.81■□□□□ 0.6
DDX56-204ENST00000431640 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
DDX56-204ENST00000431640 MIA2Q96PC5 1412 aa18.8■□□□□ 0.6
DDX56-204ENST00000431640 CAMSAP2Q08AD1 1489 aa18.8■□□□□ 0.6
DDX56-204ENST00000431640 PLCH2O75038 1416 aa18.79■□□□□ 0.6
DDX56-204ENST00000431640 ARHGAP5Q13017 1502 aa18.79■□□□□ 0.6
DDX56-204ENST00000431640 ARAP3Q8WWN8 1544 aa18.79■□□□□ 0.6
DDX56-204ENST00000431640 ZNF644Q9H582 1327 aaPredicted RBP18.78■□□□□ 0.6
DDX56-204ENST00000431640 CD109Q6YHK3 1445 aa18.75■□□□□ 0.59
DDX56-204ENST00000431640 ABCC1P33527 1531 aa18.74■□□□□ 0.59
DDX56-204ENST00000431640 ARHGEF12Q9NZN5 1544 aa18.73■□□□□ 0.59
DDX56-204ENST00000431640 SYCP2Q9BX26 1530 aa18.73■□□□□ 0.59
DDX56-204ENST00000431640 DNMT1P26358 1616 aaKnown RBP18.72■□□□□ 0.59
DDX56-204ENST00000431640 CFDP1Q9UEE9 299 aaPredicted RBP18.72■□□□□ 0.59
DDX56-204ENST00000431640 TSPOAP1O95153 1857 aa18.72■□□□□ 0.59
DDX56-204ENST00000431640 FANCAO15360 1455 aa18.72■□□□□ 0.59
DDX56-204ENST00000431640 FAM69CQ0P6D2 419 aa18.72■□□□□ 0.59
DDX56-204ENST00000431640 PTPRKQ15262 1439 aa18.72■□□□□ 0.59
DDX56-204ENST00000431640 CROCC2H7BZ55 1655 aa18.71■□□□□ 0.59
DDX56-204ENST00000431640 MBD5Q9P267 1494 aa18.7■□□□□ 0.58
DDX56-204ENST00000431640 CFAP74Q9C0B2 1584 aa18.68■□□□□ 0.58
DDX56-204ENST00000431640 ZNF777Q9ULD5 760 aaPredicted RBP18.68■□□□□ 0.58
DDX56-204ENST00000431640 ARHGEF5Q12774 1597 aa18.67■□□□□ 0.58
DDX56-204ENST00000431640 ABCC5O15440 1437 aa18.66■□□□□ 0.58
DDX56-204ENST00000431640 DAPK1P53355 1430 aa18.66■□□□□ 0.58
DDX56-204ENST00000431640 TIMELESSQ9UNS1 1208 aa18.65■□□□□ 0.58
DDX56-204ENST00000431640 ADGRL1O94910 1474 aa18.63■□□□□ 0.57
DDX56-204ENST00000431640 HFM1A2PYH4 1435 aa18.63■□□□□ 0.57
DDX56-204ENST00000431640 AKNAQ7Z591 1439 aa18.63■□□□□ 0.57
DDX56-204ENST00000431640 KIAA1107Q9UPP5 1409 aa18.62■□□□□ 0.57
DDX56-204ENST00000431640 TRAPPC8Q9Y2L5 1435 aa18.62■□□□□ 0.57
DDX56-204ENST00000431640 NEO1Q92859 1461 aa18.62■□□□□ 0.57
DDX56-204ENST00000431640 EFCAB2Q5VUJ9 269 aa18.62■□□□□ 0.57
DDX56-204ENST00000431640 FRMPD1Q5SYB0 1578 aa18.62■□□□□ 0.57
DDX56-204ENST00000431640 CCDC141Q6ZP82 1450 aa18.61■□□□□ 0.57
DDX56-204ENST00000431640 PLEKHH2Q8IVE3 1493 aa18.61■□□□□ 0.57
DDX56-204ENST00000431640 HNRNPMP52272 730 aaKnown RBP eCLIP18.6■□□□□ 0.57
DDX56-204ENST00000431640 ACIN1Q9UKV3 1341 aaKnown RBP18.59■□□□□ 0.57
DDX56-204ENST00000431640 RICTORQ6R327 1708 aa18.59■□□□□ 0.57
DDX56-204ENST00000431640 ADGBQ8N7X0 1667 aa18.58■□□□□ 0.57
DDX56-204ENST00000431640 SCAPERQ9BY12 1400 aa18.58■□□□□ 0.56
DDX56-204ENST00000431640 SHANK2Q9UPX8 1470 aa18.58■□□□□ 0.56
DDX56-204ENST00000431640 MAST1Q9Y2H9 1570 aa18.57■□□□□ 0.56
DDX56-204ENST00000431640 KDM5CP41229 1560 aa18.57■□□□□ 0.56
DDX56-204ENST00000431640 TEX14Q8IWB6 1497 aa18.56■□□□□ 0.56
DDX56-204ENST00000431640 POGZQ7Z3K3 1410 aa18.56■□□□□ 0.56
DDX56-204ENST00000431640 INO80Q9ULG1 1556 aaPredicted RBP18.56■□□□□ 0.56
DDX56-204ENST00000431640 ZFYVE16Q7Z3T8 1539 aa18.56■□□□□ 0.56
DDX56-204ENST00000431640 COL17A1Q9UMD9 1497 aaPredicted RBP18.55■□□□□ 0.56
DDX56-204ENST00000431640 ADGRL2O95490 1459 aa18.54■□□□□ 0.56
DDX56-204ENST00000431640 NAIPQ13075 1403 aa18.54■□□□□ 0.56
DDX56-204ENST00000431640 C9orf84Q5VXU9 1444 aa18.54■□□□□ 0.56
DDX56-204ENST00000431640 GCC2Q8IWJ2 1684 aa18.54■□□□□ 0.56
DDX56-204ENST00000431640 KDM6BO15054 1643 aa18.53■□□□□ 0.56
DDX56-204ENST00000431640 TRHP20396 242 aaPredicted RBP18.52■□□□□ 0.56
DDX56-204ENST00000431640 CHIC2Q9UKJ5 165 aa18.51■□□□□ 0.55
DDX56-204ENST00000431640 KIDINS220Q9ULH0 1771 aa18.51■□□□□ 0.55
DDX56-204ENST00000431640 ZNF518AQ6AHZ1 1483 aa18.51■□□□□ 0.55
DDX56-204ENST00000431640 PLXNC1O60486 1568 aa18.51■□□□□ 0.55
DDX56-204ENST00000431640 AFAP1Q8N556 730 aa18.51■□□□□ 0.55
DDX56-204ENST00000431640 DENND4BO75064 1496 aaPredicted RBP18.5■□□□□ 0.55
DDX56-204ENST00000431640 ATP7AQ04656 1500 aa18.49■□□□□ 0.55
DDX56-204ENST00000431640 HECW2Q9P2P5 1572 aa18.49■□□□□ 0.55
DDX56-204ENST00000431640 NCOA1Q15788 1441 aa18.48■□□□□ 0.55
DDX56-204ENST00000431640 ZMYM4Q5VZL5 1548 aa18.48■□□□□ 0.55
DDX56-204ENST00000431640 ROCK1Q13464 1354 aa18.47■□□□□ 0.55
DDX56-204ENST00000431640 RAPGEF3O95398 923 aa18.47■□□□□ 0.55
DDX56-204ENST00000431640 ABCA6Q8N139 1617 aa18.47■□□□□ 0.55
DDX56-204ENST00000431640 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
DDX56-204ENST00000431640 SIN3AQ96ST3 1273 aa18.47■□□□□ 0.55
DDX56-204ENST00000431640 CENPBP07199 599 aaPredicted RBP18.45■□□□□ 0.54
DDX56-204ENST00000431640 RRP7BPQ9NSQ0 103 aa18.44■□□□□ 0.54
DDX56-204ENST00000431640 DIP2CQ9Y2E4 1556 aa18.43■□□□□ 0.54
DDX56-204ENST00000431640 RTEL1-TNFRSF6BF6WH68 1400 aa18.43■□□□□ 0.54
DDX56-204ENST00000431640 MLH3Q9UHC1 1453 aa18.42■□□□□ 0.54
DDX56-204ENST00000431640 YEATS2Q9ULM3 1422 aa18.42■□□□□ 0.54
DDX56-204ENST00000431640 RSPH4AQ5TD94 716 aa18.42■□□□□ 0.54
DDX56-204ENST00000431640 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
DDX56-204ENST00000431640 KIF15Q9NS87 1388 aa18.41■□□□□ 0.54
DDX56-204ENST00000431640 PPP1R15AO75807 674 aaPredicted RBP18.41■□□□□ 0.54
DDX56-204ENST00000431640 ANKRD30AQ9BXX3 1397 aa18.41■□□□□ 0.54
DDX56-204ENST00000431640 MIER1Q8N108 512 aa18.4■□□□□ 0.54
DDX56-204ENST00000431640 SIGLEC1Q9BZZ2 1709 aa18.4■□□□□ 0.54
DDX56-204ENST00000431640 TSPY4P0CV99 314 aa18.39■□□□□ 0.53
DDX56-204ENST00000431640 TSPY10P0CW01 314 aa18.39■□□□□ 0.53
DDX56-204ENST00000431640 ARHGEF40Q8TER5 1519 aa18.38■□□□□ 0.53
DDX56-204ENST00000431640 DUOX2Q9NRD8 1548 aa18.37■□□□□ 0.53
DDX56-204ENST00000431640 TONSLQ96HA7 1378 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms