RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 ZMYM4Q5VZL5 1548 aa28.23■■■□□ 2.11
NUP50-208ENST00000430547 CDC42BPBQ9Y5S2 1711 aa28.23■■■□□ 2.11
NUP50-208ENST00000430547 PREX2Q70Z35 1606 aa28.22■■■□□ 2.11
NUP50-208ENST00000430547 POGZQ7Z3K3 1410 aa28.19■■■□□ 2.1
NUP50-208ENST00000430547 ZFYVE16Q7Z3T8 1539 aa28.18■■■□□ 2.1
NUP50-208ENST00000430547 CDC42BPAQ5VT25 1732 aa28.18■■■□□ 2.1
NUP50-208ENST00000430547 ARID4BQ4LE39 1312 aaPredicted RBP28.17■■■□□ 2.1
NUP50-208ENST00000430547 MAGI2Q86UL8 1455 aa28.16■■■□□ 2.1
NUP50-208ENST00000430547 BCORL1Q5H9F3 1711 aa28.13■■■□□ 2.09
NUP50-208ENST00000430547 LOC105371045A0A1W2PR82 267 aa28.12■■■□□ 2.09
NUP50-208ENST00000430547 ZNF518AQ6AHZ1 1483 aa28.12■■■□□ 2.09
NUP50-208ENST00000430547 ADAMTSL3P82987 1691 aa28.11■■■□□ 2.09
NUP50-208ENST00000430547 MTUS2Q5JR59 1369 aa28.11■■■□□ 2.09
NUP50-208ENST00000430547 YEATS2Q9ULM3 1422 aa28.09■■■□□ 2.09
NUP50-208ENST00000430547 ITSN2Q9NZM3 1697 aa28.07■■■□□ 2.08
NUP50-208ENST00000430547 ABCC1P33527 1531 aa28.07■■■□□ 2.08
NUP50-208ENST00000430547 KDM5CP41229 1560 aa28.06■■■□□ 2.08
NUP50-208ENST00000430547 EHBP1L1Q8N3D4 1523 aa28.05■■■□□ 2.08
NUP50-208ENST00000430547 MADDQ8WXG6 1647 aa28.04■■■□□ 2.08
NUP50-208ENST00000430547 HECW2Q9P2P5 1572 aa28.04■■■□□ 2.08
NUP50-208ENST00000430547 MYT1LQ9UL68 1186 aa28.03■■■□□ 2.08
NUP50-208ENST00000430547 GPATCH8Q9UKJ3 1502 aaKnown RBP28.01■■■□□ 2.07
NUP50-208ENST00000430547 SIGLEC1Q9BZZ2 1709 aa28.01■■■□□ 2.07
NUP50-208ENST00000430547 CCNB3Q8WWL7 1395 aa28■■■□□ 2.07
NUP50-208ENST00000430547 AFAP1Q8N556 730 aa28■■■□□ 2.07
NUP50-208ENST00000430547 ATP10AO60312 1499 aa28■■■□□ 2.07
NUP50-208ENST00000430547 ZNF777Q9ULD5 760 aaPredicted RBP27.99■■■□□ 2.07
NUP50-208ENST00000430547 C9orf84Q5VXU9 1444 aa27.99■■■□□ 2.07
NUP50-208ENST00000430547 SAMD9LQ8IVG5 1584 aa27.99■■■□□ 2.07
NUP50-208ENST00000430547 RIMS1Q86UR5 1692 aaKnown RBP27.98■■■□□ 2.07
NUP50-208ENST00000430547 PTPRMP28827 1452 aa27.98■■■□□ 2.07
NUP50-208ENST00000430547 VPS8Q8N3P4 1428 aa27.97■■■□□ 2.07
NUP50-208ENST00000430547 ARHGEF12Q9NZN5 1544 aa27.96■■■□□ 2.07
NUP50-208ENST00000430547 TRAPPC8Q9Y2L5 1435 aa27.94■■■□□ 2.06
NUP50-208ENST00000430547 CFDP1Q9UEE9 299 aaPredicted RBP27.94■■■□□ 2.06
NUP50-208ENST00000430547 SUPT6HQ7KZ85 1726 aaKnown RBP27.94■■■□□ 2.06
NUP50-208ENST00000430547 TIAM1Q13009 1591 aa27.94■■■□□ 2.06
NUP50-208ENST00000430547 SYCP2Q9BX26 1530 aa27.93■■■□□ 2.06
NUP50-208ENST00000430547 MLH3Q9UHC1 1453 aa27.93■■■□□ 2.06
NUP50-208ENST00000430547 DIP2CQ9Y2E4 1556 aa27.93■■■□□ 2.06
NUP50-208ENST00000430547 FER1L4A9Z1Z3 1794 aa27.93■■■□□ 2.06
NUP50-208ENST00000430547 ABCA6Q8N139 1617 aa27.92■■■□□ 2.06
NUP50-208ENST00000430547 PLEKHH2Q8IVE3 1493 aa27.91■■■□□ 2.06
NUP50-208ENST00000430547 MLECQ14165 292 aa27.9■■■□□ 2.06
NUP50-208ENST00000430547 KIDINS220Q9ULH0 1771 aa27.88■■■□□ 2.05
NUP50-208ENST00000430547 REREQ9P2R6 1566 aa27.86■■■□□ 2.05
NUP50-208ENST00000430547 KIAA1107Q9UPP5 1409 aa27.84■■■□□ 2.05
NUP50-208ENST00000430547 HNRNPMP52272 730 aaKnown RBP eCLIP27.83■■■□□ 2.05
NUP50-208ENST00000430547 NCOA2Q15596 1464 aa27.83■■■□□ 2.04
NUP50-208ENST00000430547 SPAG9O60271 1321 aaKnown RBP27.8■■■□□ 2.04
NUP50-208ENST00000430547 ATP7AQ04656 1500 aa27.78■■■□□ 2.04
NUP50-208ENST00000430547 LRRC9Q6ZRR7 1453 aa27.78■■■□□ 2.04
NUP50-208ENST00000430547 PLPPR3Q6T4P5 718 aa27.78■■■□□ 2.04
NUP50-208ENST00000430547 MAP3K1Q13233 1512 aa27.77■■■□□ 2.04
NUP50-208ENST00000430547 INO80Q9ULG1 1556 aaPredicted RBP27.77■■■□□ 2.04
NUP50-208ENST00000430547 AGLP35573 1532 aa27.76■■■□□ 2.03
NUP50-208ENST00000430547 ZNF644Q9H582 1327 aaPredicted RBP27.73■■■□□ 2.03
NUP50-208ENST00000430547 CAMSAP2Q08AD1 1489 aa27.7■■■□□ 2.03
NUP50-208ENST00000430547 APLP2Q06481 763 aa27.7■■■□□ 2.02
NUP50-208ENST00000430547 ADGBQ8N7X0 1667 aa27.68■■■□□ 2.02
NUP50-208ENST00000430547 ESF1Q9H501 851 aaKnown RBP27.68■■■□□ 2.02
NUP50-208ENST00000430547 MBD5Q9P267 1494 aa27.68■■■□□ 2.02
NUP50-208ENST00000430547 LMTK3Q96Q04 1460 aa27.65■■■□□ 2.02
NUP50-208ENST00000430547 A2MP01023 1474 aa27.64■■■□□ 2.02
NUP50-208ENST00000430547 CCDC141Q6ZP82 1450 aa27.64■■■□□ 2.02
NUP50-208ENST00000430547 KANK4Q5T7N3 995 aaPredicted RBP27.64■■■□□ 2.02
NUP50-208ENST00000430547 PLXNC1O60486 1568 aa27.63■■■□□ 2.01
NUP50-208ENST00000430547 C3P01024 1663 aa27.61■■■□□ 2.01
NUP50-208ENST00000430547 PREX1Q8TCU6 1659 aa27.61■■■□□ 2.01
NUP50-208ENST00000430547 RTEL1-TNFRSF6BF6WH68 1400 aa27.6■■■□□ 2.01
NUP50-208ENST00000430547 ARHGEF5Q12774 1597 aa27.6■■■□□ 2.01
NUP50-208ENST00000430547 RSPH4AQ5TD94 716 aa27.59■■■□□ 2.01
NUP50-208ENST00000430547 CEBPAP49715 358 aaPredicted RBP27.58■■■□□ 2.01
NUP50-208ENST00000430547 MYOM3Q5VTT5 1437 aa27.58■■■□□ 2
NUP50-208ENST00000430547 CNTLNQ9NXG0 1405 aa27.58■■■□□ 2
NUP50-208ENST00000430547 MROH2AA6NES4 1674 aa27.56■■■□□ 2
NUP50-208ENST00000430547 SETD1BQ9UPS6 1966 aaKnown RBP27.55■■■□□ 2
NUP50-208ENST00000430547 MIA2Q96PC5 1412 aa27.54■■■□□ 2
NUP50-208ENST00000430547 CLTCQ00610 1675 aaKnown RBP27.52■■■□□ 2
NUP50-208ENST00000430547 TSPY4P0CV99 314 aa27.51■■□□□ 1.99
NUP50-208ENST00000430547 TSPY10P0CW01 314 aa27.51■■□□□ 1.99
NUP50-208ENST00000430547 HSPA2P54652 639 aa27.49■■□□□ 1.99
NUP50-208ENST00000430547 GGT6Q6P531 493 aa27.48■■□□□ 1.99
NUP50-208ENST00000430547 UHRF1BP1Q6BDS2 1440 aa27.48■■□□□ 1.99
NUP50-208ENST00000430547 DHX29Q7Z478 1369 aaKnown RBP27.48■■□□□ 1.99
NUP50-208ENST00000430547 MAST1Q9Y2H9 1570 aa27.45■■□□□ 1.99
NUP50-208ENST00000430547 PTPN23Q9H3S7 1636 aa27.44■■□□□ 1.98
NUP50-208ENST00000430547 ZMYM3Q14202 1370 aa27.41■■□□□ 1.98
NUP50-208ENST00000430547 PPP6R1Q9UPN7 881 aa27.4■■□□□ 1.98
NUP50-208ENST00000430547 CROCC2H7BZ55 1655 aa27.4■■□□□ 1.98
NUP50-208ENST00000430547 KIF3BO15066 747 aa27.39■■□□□ 1.98
NUP50-208ENST00000430547 NPATQ14207 1427 aa27.37■■□□□ 1.97
NUP50-208ENST00000430547 FGD6Q6ZV73 1430 aa27.36■■□□□ 1.97
NUP50-208ENST00000430547 FAM135AQ9P2D6 1515 aa27.34■■□□□ 1.97
NUP50-208ENST00000430547 KDM5DQ9BY66 1539 aa27.33■■□□□ 1.97
NUP50-208ENST00000430547 DNMT1P26358 1616 aaKnown RBP27.32■■□□□ 1.96
NUP50-208ENST00000430547 EIF2AK4Q9P2K8 1649 aaKnown RBP27.32■■□□□ 1.96
NUP50-208ENST00000430547 SHANK2Q9UPX8 1470 aa27.32■■□□□ 1.96
NUP50-208ENST00000430547 TCOF1Q13428 1488 aaKnown RBP27.31■■□□□ 1.96
NUP50-208ENST00000430547 MYO3AQ8NEV4 1616 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms