RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 CCNB3Q8WWL7 1395 aa31.46■■■□□ 2.63
CSNK1E-207ENST00000430335 PREX2Q70Z35 1606 aa31.46■■■□□ 2.63
CSNK1E-207ENST00000430335 ARHGAP5Q13017 1502 aa31.45■■■□□ 2.63
CSNK1E-207ENST00000430335 SUPT6HQ7KZ85 1726 aaKnown RBP31.45■■■□□ 2.63
CSNK1E-207ENST00000430335 NCOA2Q15596 1464 aa31.45■■■□□ 2.62
CSNK1E-207ENST00000430335 CDC42BPAQ5VT25 1732 aa31.42■■■□□ 2.62
CSNK1E-207ENST00000430335 CDC42BPBQ9Y5S2 1711 aa31.42■■■□□ 2.62
CSNK1E-207ENST00000430335 ADGRL1O94910 1474 aa31.38■■■□□ 2.61
CSNK1E-207ENST00000430335 DENND4BO75064 1496 aaPredicted RBP31.37■■■□□ 2.61
CSNK1E-207ENST00000430335 CFDP1Q9UEE9 299 aaPredicted RBP31.36■■■□□ 2.61
CSNK1E-207ENST00000430335 SCAPERQ9BY12 1400 aa31.35■■■□□ 2.61
CSNK1E-207ENST00000430335 RAPGEF3O95398 923 aa31.33■■■□□ 2.61
CSNK1E-207ENST00000430335 ITSN2Q9NZM3 1697 aa31.32■■■□□ 2.6
CSNK1E-207ENST00000430335 FRMPD1Q5SYB0 1578 aa31.29■■■□□ 2.6
CSNK1E-207ENST00000430335 POGZQ7Z3K3 1410 aa31.28■■■□□ 2.6
CSNK1E-207ENST00000430335 ABCC1P33527 1531 aa31.28■■■□□ 2.6
CSNK1E-207ENST00000430335 ZNF777Q9ULD5 760 aaPredicted RBP31.27■■■□□ 2.6
CSNK1E-207ENST00000430335 SAMD9LQ8IVG5 1584 aa31.26■■■□□ 2.59
CSNK1E-207ENST00000430335 RICTORQ6R327 1708 aa31.25■■■□□ 2.59
CSNK1E-207ENST00000430335 PLEKHH2Q8IVE3 1493 aa31.25■■■□□ 2.59
CSNK1E-207ENST00000430335 KIAA1107Q9UPP5 1409 aa31.24■■■□□ 2.59
CSNK1E-207ENST00000430335 ARHGEF12Q9NZN5 1544 aa31.23■■■□□ 2.59
CSNK1E-207ENST00000430335 MYOM3Q5VTT5 1437 aa31.23■■■□□ 2.59
CSNK1E-207ENST00000430335 ZNF518AQ6AHZ1 1483 aa31.21■■■□□ 2.59
CSNK1E-207ENST00000430335 MIA2Q96PC5 1412 aa31.2■■■□□ 2.59
CSNK1E-207ENST00000430335 ZMYM4Q5VZL5 1548 aa31.19■■■□□ 2.58
CSNK1E-207ENST00000430335 ZNF644Q9H582 1327 aaPredicted RBP31.18■■■□□ 2.58
CSNK1E-207ENST00000430335 TRAPPC8Q9Y2L5 1435 aa31.17■■■□□ 2.58
CSNK1E-207ENST00000430335 AFAP1Q8N556 730 aa31.17■■■□□ 2.58
CSNK1E-207ENST00000430335 MAGI2Q86UL8 1455 aa31.16■■■□□ 2.58
CSNK1E-207ENST00000430335 SYCP2Q9BX26 1530 aa31.16■■■□□ 2.58
CSNK1E-207ENST00000430335 KDM5CP41229 1560 aa31.15■■■□□ 2.58
CSNK1E-207ENST00000430335 HNRNPMP52272 730 aaKnown RBP eCLIP31.15■■■□□ 2.58
CSNK1E-207ENST00000430335 CAMSAP2Q08AD1 1489 aa31.14■■■□□ 2.57
CSNK1E-207ENST00000430335 MBD5Q9P267 1494 aa31.11■■■□□ 2.57
CSNK1E-207ENST00000430335 MLH3Q9UHC1 1453 aa31.08■■■□□ 2.57
CSNK1E-207ENST00000430335 FGD6Q6ZV73 1430 aa31.07■■■□□ 2.57
CSNK1E-207ENST00000430335 RSPH4AQ5TD94 716 aa31.07■■■□□ 2.56
CSNK1E-207ENST00000430335 ZFYVE16Q7Z3T8 1539 aa31.06■■■□□ 2.56
CSNK1E-207ENST00000430335 ARHGEF40Q8TER5 1519 aa31.06■■■□□ 2.56
CSNK1E-207ENST00000430335 YEATS2Q9ULM3 1422 aa31.05■■■□□ 2.56
CSNK1E-207ENST00000430335 HECW2Q9P2P5 1572 aa31.04■■■□□ 2.56
CSNK1E-207ENST00000430335 PPARGC1BQ86YN6 1023 aaKnown RBP31.03■■■□□ 2.56
CSNK1E-207ENST00000430335 TCOF1Q13428 1488 aaKnown RBP31.01■■■□□ 2.55
CSNK1E-207ENST00000430335 CCDC141Q6ZP82 1450 aa31.01■■■□□ 2.55
CSNK1E-207ENST00000430335 ARHGEF5Q12774 1597 aa31■■■□□ 2.55
CSNK1E-207ENST00000430335 SPAG9O60271 1321 aaKnown RBP31■■■□□ 2.55
CSNK1E-207ENST00000430335 PTPN23Q9H3S7 1636 aa30.99■■■□□ 2.55
CSNK1E-207ENST00000430335 MYT1LQ9UL68 1186 aa30.98■■■□□ 2.55
CSNK1E-207ENST00000430335 ATP10AO60312 1499 aa30.96■■■□□ 2.55
CSNK1E-207ENST00000430335 RTEL1-TNFRSF6BF6WH68 1400 aa30.94■■■□□ 2.54
CSNK1E-207ENST00000430335 KIDINS220Q9ULH0 1771 aa30.94■■■□□ 2.54
CSNK1E-207ENST00000430335 INO80Q9ULG1 1556 aaPredicted RBP30.92■■■□□ 2.54
CSNK1E-207ENST00000430335 ATP7AQ04656 1500 aa30.92■■■□□ 2.54
CSNK1E-207ENST00000430335 DIP2CQ9Y2E4 1556 aa30.92■■■□□ 2.54
CSNK1E-207ENST00000430335 C9orf84Q5VXU9 1444 aa30.91■■■□□ 2.54
CSNK1E-207ENST00000430335 TSPY4P0CV99 314 aa30.9■■■□□ 2.54
CSNK1E-207ENST00000430335 TSPY10P0CW01 314 aa30.9■■■□□ 2.54
CSNK1E-207ENST00000430335 ABCA6Q8N139 1617 aa30.89■■■□□ 2.54
CSNK1E-207ENST00000430335 REREQ9P2R6 1566 aa30.87■■■□□ 2.53
CSNK1E-207ENST00000430335 ABCC5O15440 1437 aa30.85■■■□□ 2.53
CSNK1E-207ENST00000430335 MAST1Q9Y2H9 1570 aa30.83■■■□□ 2.53
CSNK1E-207ENST00000430335 ARID4BQ4LE39 1312 aaPredicted RBP30.83■■■□□ 2.53
CSNK1E-207ENST00000430335 FAM50AQ14320 339 aaKnown RBP30.83■■■□□ 2.53
CSNK1E-207ENST00000430335 DAPK1P53355 1430 aa30.82■■■□□ 2.52
CSNK1E-207ENST00000430335 SHANK2Q9UPX8 1470 aa30.82■■■□□ 2.52
CSNK1E-207ENST00000430335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.81■■■□□ 2.52
CSNK1E-207ENST00000430335 DNMT1P26358 1616 aaKnown RBP30.81■■■□□ 2.52
CSNK1E-207ENST00000430335 KDM4FA0A1W2PPD8 638 aa30.79■■■□□ 2.52
CSNK1E-207ENST00000430335 SIGLEC1Q9BZZ2 1709 aa30.78■■■□□ 2.52
CSNK1E-207ENST00000430335 RRBP1Q9P2E9 1410 aaKnown RBP30.78■■■□□ 2.52
CSNK1E-207ENST00000430335 AGLP35573 1532 aa30.78■■■□□ 2.52
CSNK1E-207ENST00000430335 A2MP01023 1474 aa30.77■■■□□ 2.52
CSNK1E-207ENST00000430335 CROCC2H7BZ55 1655 aa30.74■■■□□ 2.51
CSNK1E-207ENST00000430335 PLXNC1O60486 1568 aa30.74■■■□□ 2.51
CSNK1E-207ENST00000430335 ADGBQ8N7X0 1667 aa30.74■■■□□ 2.51
CSNK1E-207ENST00000430335 DHX29Q7Z478 1369 aaKnown RBP30.73■■■□□ 2.51
CSNK1E-207ENST00000430335 BCORL1Q5H9F3 1711 aa30.73■■■□□ 2.51
CSNK1E-207ENST00000430335 ADAMTSL3P82987 1691 aa30.67■■■□□ 2.5
CSNK1E-207ENST00000430335 ANKRD30AQ9BXX3 1397 aa30.65■■■□□ 2.5
CSNK1E-207ENST00000430335 ADGRL2O95490 1459 aa30.64■■■□□ 2.5
CSNK1E-207ENST00000430335 MLECQ14165 292 aa30.64■■■□□ 2.5
CSNK1E-207ENST00000430335 CHIC2Q9UKJ5 165 aa30.64■■■□□ 2.5
CSNK1E-207ENST00000430335 KIF15Q9NS87 1388 aa30.63■■■□□ 2.49
CSNK1E-207ENST00000430335 PTPRKQ15262 1439 aa30.63■■■□□ 2.49
CSNK1E-207ENST00000430335 NCOA1Q15788 1441 aa30.63■■■□□ 2.49
CSNK1E-207ENST00000430335 DUOX2Q9NRD8 1548 aa30.61■■■□□ 2.49
CSNK1E-207ENST00000430335 RRP7BPQ9NSQ0 103 aa30.59■■■□□ 2.49
CSNK1E-207ENST00000430335 MADDQ8WXG6 1647 aa30.57■■■□□ 2.48
CSNK1E-207ENST00000430335 ROCK1Q13464 1354 aa30.56■■■□□ 2.48
CSNK1E-207ENST00000430335 KIF3BO15066 747 aa30.55■■■□□ 2.48
CSNK1E-207ENST00000430335 ITGAEP38570 1179 aa30.54■■■□□ 2.48
CSNK1E-207ENST00000430335 ERBINQ96RT1 1412 aa30.54■■■□□ 2.48
CSNK1E-207ENST00000430335 PPP6R1Q9UPN7 881 aa30.53■■■□□ 2.48
CSNK1E-207ENST00000430335 EIF2AK4Q9P2K8 1649 aaKnown RBP30.51■■■□□ 2.48
CSNK1E-207ENST00000430335 GGT6Q6P531 493 aa30.51■■■□□ 2.47
CSNK1E-207ENST00000430335 AEBP2Q6ZN18 517 aaPredicted RBP30.5■■■□□ 2.47
CSNK1E-207ENST00000430335 PTPRMP28827 1452 aa30.5■■■□□ 2.47
CSNK1E-207ENST00000430335 FER1L4A9Z1Z3 1794 aa30.49■■■□□ 2.47
CSNK1E-207ENST00000430335 CNTLNQ9NXG0 1405 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms