RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 CDC42BPBQ9Y5S2 1711 aa17.13■□□□□ 0.33
ATG4B-210ENST00000428861 AEBP2Q6ZN18 517 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-210ENST00000428861 MTUS2Q5JR59 1369 aa17.12■□□□□ 0.33
ATG4B-210ENST00000428861 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
ATG4B-210ENST00000428861 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
ATG4B-210ENST00000428861 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
ATG4B-210ENST00000428861 CDC42BPAQ5VT25 1732 aa17.1■□□□□ 0.33
ATG4B-210ENST00000428861 ARHGEF12Q9NZN5 1544 aa17.09■□□□□ 0.33
ATG4B-210ENST00000428861 TIAM1Q13009 1591 aa17.08■□□□□ 0.32
ATG4B-210ENST00000428861 EHBP1L1Q8N3D4 1523 aa17.08■□□□□ 0.32
ATG4B-210ENST00000428861 YEATS2Q9ULM3 1422 aa17.08■□□□□ 0.32
ATG4B-210ENST00000428861 ZMYM4Q5VZL5 1548 aa17.07■□□□□ 0.32
ATG4B-210ENST00000428861 AFAP1Q8N556 730 aa17.07■□□□□ 0.32
ATG4B-210ENST00000428861 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-210ENST00000428861 TRAPPC8Q9Y2L5 1435 aa17.05■□□□□ 0.32
ATG4B-210ENST00000428861 ABCC1P33527 1531 aa17.05■□□□□ 0.32
ATG4B-210ENST00000428861 ARHGEF40Q8TER5 1519 aa17.05■□□□□ 0.32
ATG4B-210ENST00000428861 CCNB3Q8WWL7 1395 aa17.04■□□□□ 0.32
ATG4B-210ENST00000428861 ZNF777Q9ULD5 760 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-210ENST00000428861 SAMD9LQ8IVG5 1584 aa17.03■□□□□ 0.32
ATG4B-210ENST00000428861 LRRC9Q6ZRR7 1453 aa17.03■□□□□ 0.32
ATG4B-210ENST00000428861 ZFYVE16Q7Z3T8 1539 aa17.02■□□□□ 0.32
ATG4B-210ENST00000428861 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
ATG4B-210ENST00000428861 CFDP1Q9UEE9 299 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-210ENST00000428861 SIGLEC1Q9BZZ2 1709 aa17.01■□□□□ 0.31
ATG4B-210ENST00000428861 ZNF644Q9H582 1327 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-210ENST00000428861 ZNF518AQ6AHZ1 1483 aa17.01■□□□□ 0.31
ATG4B-210ENST00000428861 MAGI2Q86UL8 1455 aa17.01■□□□□ 0.31
ATG4B-210ENST00000428861 KDM5CP41229 1560 aa17.01■□□□□ 0.31
ATG4B-210ENST00000428861 HNRNPMP52272 730 aaKnown RBP eCLIP17■□□□□ 0.31
ATG4B-210ENST00000428861 ITSN2Q9NZM3 1697 aa17■□□□□ 0.31
ATG4B-210ENST00000428861 MAP3K1Q13233 1512 aa17■□□□□ 0.31
ATG4B-210ENST00000428861 SYCP2Q9BX26 1530 aa16.98■□□□□ 0.31
ATG4B-210ENST00000428861 SUPT6HQ7KZ85 1726 aaKnown RBP16.97■□□□□ 0.31
ATG4B-210ENST00000428861 ARID4BQ4LE39 1312 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-210ENST00000428861 KIAA1107Q9UPP5 1409 aa16.96■□□□□ 0.3
ATG4B-210ENST00000428861 ATP10AO60312 1499 aa16.95■□□□□ 0.3
ATG4B-210ENST00000428861 MLH3Q9UHC1 1453 aa16.95■□□□□ 0.3
ATG4B-210ENST00000428861 HECW2Q9P2P5 1572 aa16.94■□□□□ 0.3
ATG4B-210ENST00000428861 ADAMTSL3P82987 1691 aa16.94■□□□□ 0.3
ATG4B-210ENST00000428861 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
ATG4B-210ENST00000428861 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
ATG4B-210ENST00000428861 C9orf84Q5VXU9 1444 aa16.93■□□□□ 0.3
ATG4B-210ENST00000428861 DIP2CQ9Y2E4 1556 aa16.93■□□□□ 0.3
ATG4B-210ENST00000428861 ABCA6Q8N139 1617 aa16.92■□□□□ 0.3
ATG4B-210ENST00000428861 MYT1LQ9UL68 1186 aa16.92■□□□□ 0.3
ATG4B-210ENST00000428861 PLEKHH2Q8IVE3 1493 aa16.92■□□□□ 0.3
ATG4B-210ENST00000428861 KIDINS220Q9ULH0 1771 aa16.91■□□□□ 0.3
ATG4B-210ENST00000428861 MLECQ14165 292 aa16.9■□□□□ 0.3
ATG4B-210ENST00000428861 MADDQ8WXG6 1647 aa16.89■□□□□ 0.29
ATG4B-210ENST00000428861 CAMSAP2Q08AD1 1489 aa16.89■□□□□ 0.29
ATG4B-210ENST00000428861 SPAG9O60271 1321 aaKnown RBP16.89■□□□□ 0.29
ATG4B-210ENST00000428861 APLP2Q06481 763 aa16.88■□□□□ 0.29
ATG4B-210ENST00000428861 PTPRMP28827 1452 aa16.87■□□□□ 0.29
ATG4B-210ENST00000428861 MYOM3Q5VTT5 1437 aa16.86■□□□□ 0.29
ATG4B-210ENST00000428861 REREQ9P2R6 1566 aa16.85■□□□□ 0.29
ATG4B-210ENST00000428861 INO80Q9ULG1 1556 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-210ENST00000428861 ATP7AQ04656 1500 aa16.85■□□□□ 0.29
ATG4B-210ENST00000428861 MIA2Q96PC5 1412 aa16.82■□□□□ 0.28
ATG4B-210ENST00000428861 RIMS1Q86UR5 1692 aaKnown RBP16.81■□□□□ 0.28
ATG4B-210ENST00000428861 AGLP35573 1532 aa16.81■□□□□ 0.28
ATG4B-210ENST00000428861 CCDC141Q6ZP82 1450 aa16.81■□□□□ 0.28
ATG4B-210ENST00000428861 ARHGEF5Q12774 1597 aa16.79■□□□□ 0.28
ATG4B-210ENST00000428861 RTEL1-TNFRSF6BF6WH68 1400 aa16.79■□□□□ 0.28
ATG4B-210ENST00000428861 PLXNC1O60486 1568 aa16.78■□□□□ 0.28
ATG4B-210ENST00000428861 RSPH4AQ5TD94 716 aa16.78■□□□□ 0.28
ATG4B-210ENST00000428861 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
ATG4B-210ENST00000428861 A2MP01023 1474 aa16.78■□□□□ 0.28
ATG4B-210ENST00000428861 FER1L4A9Z1Z3 1794 aa16.77■□□□□ 0.27
ATG4B-210ENST00000428861 FGD6Q6ZV73 1430 aa16.76■□□□□ 0.27
ATG4B-210ENST00000428861 CEBPAP49715 358 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-210ENST00000428861 PPARGC1BQ86YN6 1023 aaKnown RBP16.75■□□□□ 0.27
ATG4B-210ENST00000428861 PTPN23Q9H3S7 1636 aa16.74■□□□□ 0.27
ATG4B-210ENST00000428861 TSPY4P0CV99 314 aa16.73■□□□□ 0.27
ATG4B-210ENST00000428861 TSPY10P0CW01 314 aa16.73■□□□□ 0.27
ATG4B-210ENST00000428861 DHX29Q7Z478 1369 aaKnown RBP16.73■□□□□ 0.27
ATG4B-210ENST00000428861 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
ATG4B-210ENST00000428861 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
ATG4B-210ENST00000428861 ABCC5O15440 1437 aa16.72■□□□□ 0.27
ATG4B-210ENST00000428861 MAST1Q9Y2H9 1570 aa16.7■□□□□ 0.26
ATG4B-210ENST00000428861 GGT6Q6P531 493 aa16.69■□□□□ 0.26
ATG4B-210ENST00000428861 DAPK1P53355 1430 aa16.68■□□□□ 0.26
ATG4B-210ENST00000428861 LMTK3Q96Q04 1460 aa16.67■□□□□ 0.26
ATG4B-210ENST00000428861 KIF3BO15066 747 aa16.66■□□□□ 0.26
ATG4B-210ENST00000428861 DNMT1P26358 1616 aaKnown RBP16.65■□□□□ 0.26
ATG4B-210ENST00000428861 C3P01024 1663 aa16.65■□□□□ 0.26
ATG4B-210ENST00000428861 FAM50AQ14320 339 aaKnown RBP16.64■□□□□ 0.25
ATG4B-210ENST00000428861 ESF1Q9H501 851 aaKnown RBP16.64■□□□□ 0.25
ATG4B-210ENST00000428861 SHANK2Q9UPX8 1470 aa16.64■□□□□ 0.25
ATG4B-210ENST00000428861 ZMYM3Q14202 1370 aa16.64■□□□□ 0.25
ATG4B-210ENST00000428861 CNTLNQ9NXG0 1405 aa16.63■□□□□ 0.25
ATG4B-210ENST00000428861 CROCC2H7BZ55 1655 aa16.63■□□□□ 0.25
ATG4B-210ENST00000428861 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
ATG4B-210ENST00000428861 HSPA2P54652 639 aa16.62■□□□□ 0.25
ATG4B-210ENST00000428861 RRP7BPQ9NSQ0 103 aa16.62■□□□□ 0.25
ATG4B-210ENST00000428861 CLTCQ00610 1675 aaKnown RBP16.62■□□□□ 0.25
ATG4B-210ENST00000428861 KIF15Q9NS87 1388 aa16.61■□□□□ 0.25
ATG4B-210ENST00000428861 PTPRKQ15262 1439 aa16.61■□□□□ 0.25
ATG4B-210ENST00000428861 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
ATG4B-210ENST00000428861 DUOX2Q9NRD8 1548 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms