RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 ARHGAP5Q13017 1502 aa19.46■□□□□ 0.71
TTC3-208ENST00000428693 ZFYVE16Q7Z3T8 1539 aa19.46■□□□□ 0.71
TTC3-208ENST00000428693 BCORL1Q5H9F3 1711 aa19.45■□□□□ 0.7
TTC3-208ENST00000428693 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
TTC3-208ENST00000428693 PCF11O94913 1555 aaKnown RBP19.45■□□□□ 0.7
TTC3-208ENST00000428693 YEATS2Q9ULM3 1422 aa19.45■□□□□ 0.7
TTC3-208ENST00000428693 CASKIN1Q8WXD9 1431 aa19.44■□□□□ 0.7
TTC3-208ENST00000428693 MADDQ8WXG6 1647 aa19.43■□□□□ 0.7
TTC3-208ENST00000428693 POGZQ7Z3K3 1410 aa19.43■□□□□ 0.7
TTC3-208ENST00000428693 CCDC18Q5T9S5 1454 aa19.41■□□□□ 0.7
TTC3-208ENST00000428693 ZMYM4Q5VZL5 1548 aa19.41■□□□□ 0.7
TTC3-208ENST00000428693 MAGI2Q86UL8 1455 aa19.4■□□□□ 0.7
TTC3-208ENST00000428693 RIMS1Q86UR5 1692 aaKnown RBP19.4■□□□□ 0.7
TTC3-208ENST00000428693 AFAP1Q8N556 730 aa19.39■□□□□ 0.69
TTC3-208ENST00000428693 FYCO1Q9BQS8 1478 aa19.37■□□□□ 0.69
TTC3-208ENST00000428693 ZNF777Q9ULD5 760 aaPredicted RBP19.37■□□□□ 0.69
TTC3-208ENST00000428693 ZNF518AQ6AHZ1 1483 aa19.35■□□□□ 0.69
TTC3-208ENST00000428693 ILDR1Q86SU0 546 aaPredicted RBP19.34■□□□□ 0.69
TTC3-208ENST00000428693 ATP10AO60312 1499 aa19.34■□□□□ 0.69
TTC3-208ENST00000428693 SIGLEC1Q9BZZ2 1709 aa19.33■□□□□ 0.68
TTC3-208ENST00000428693 CDC42BPBQ9Y5S2 1711 aa19.33■□□□□ 0.68
TTC3-208ENST00000428693 C9orf84Q5VXU9 1444 aa19.32■□□□□ 0.68
TTC3-208ENST00000428693 PREX2Q70Z35 1606 aa19.3■□□□□ 0.68
TTC3-208ENST00000428693 FER1L4A9Z1Z3 1794 aa19.28■□□□□ 0.68
TTC3-208ENST00000428693 MTUS2Q5JR59 1369 aa19.27■□□□□ 0.68
TTC3-208ENST00000428693 TRAPPC8Q9Y2L5 1435 aa19.26■□□□□ 0.67
TTC3-208ENST00000428693 CDC42BPAQ5VT25 1732 aa19.26■□□□□ 0.67
TTC3-208ENST00000428693 HSPA2P54652 639 aa19.26■□□□□ 0.67
TTC3-208ENST00000428693 KDM5CP41229 1560 aa19.25■□□□□ 0.67
TTC3-208ENST00000428693 ESF1Q9H501 851 aaKnown RBP19.25■□□□□ 0.67
TTC3-208ENST00000428693 ABCC1P33527 1531 aa19.25■□□□□ 0.67
TTC3-208ENST00000428693 CCNB3Q8WWL7 1395 aa19.24■□□□□ 0.67
TTC3-208ENST00000428693 CEBPAP49715 358 aaPredicted RBP19.24■□□□□ 0.67
TTC3-208ENST00000428693 CFDP1Q9UEE9 299 aaPredicted RBP19.24■□□□□ 0.67
TTC3-208ENST00000428693 ARHGEF12Q9NZN5 1544 aa19.24■□□□□ 0.67
TTC3-208ENST00000428693 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
TTC3-208ENST00000428693 LMTK3Q96Q04 1460 aa19.23■□□□□ 0.67
TTC3-208ENST00000428693 HNRNPMP52272 730 aaKnown RBP eCLIP19.23■□□□□ 0.67
TTC3-208ENST00000428693 ITSN2Q9NZM3 1697 aa19.23■□□□□ 0.67
TTC3-208ENST00000428693 DIP2CQ9Y2E4 1556 aa19.22■□□□□ 0.67
TTC3-208ENST00000428693 GPATCH8Q9UKJ3 1502 aaKnown RBP19.2■□□□□ 0.66
TTC3-208ENST00000428693 ABCA6Q8N139 1617 aa19.2■□□□□ 0.66
TTC3-208ENST00000428693 MLH3Q9UHC1 1453 aa19.2■□□□□ 0.66
TTC3-208ENST00000428693 LOC105371045A0A1W2PR82 267 aa19.19■□□□□ 0.66
TTC3-208ENST00000428693 SPAG9O60271 1321 aaKnown RBP19.19■□□□□ 0.66
TTC3-208ENST00000428693 SYCP2Q9BX26 1530 aa19.18■□□□□ 0.66
TTC3-208ENST00000428693 SAMD9LQ8IVG5 1584 aa19.17■□□□□ 0.66
TTC3-208ENST00000428693 KIDINS220Q9ULH0 1771 aa19.14■□□□□ 0.65
TTC3-208ENST00000428693 EHBP1L1Q8N3D4 1523 aa19.12■□□□□ 0.65
TTC3-208ENST00000428693 PLEKHH2Q8IVE3 1493 aa19.12■□□□□ 0.65
TTC3-208ENST00000428693 ZNF644Q9H582 1327 aaPredicted RBP19.12■□□□□ 0.65
TTC3-208ENST00000428693 REREQ9P2R6 1566 aa19.11■□□□□ 0.65
TTC3-208ENST00000428693 KIAA1107Q9UPP5 1409 aa19.08■□□□□ 0.65
TTC3-208ENST00000428693 SUPT6HQ7KZ85 1726 aaKnown RBP19.08■□□□□ 0.65
TTC3-208ENST00000428693 PREX1Q8TCU6 1659 aa19.08■□□□□ 0.65
TTC3-208ENST00000428693 TIAM1Q13009 1591 aa19.08■□□□□ 0.65
TTC3-208ENST00000428693 AGLP35573 1532 aa19.08■□□□□ 0.64
TTC3-208ENST00000428693 UHRF1BP1Q6BDS2 1440 aa19.08■□□□□ 0.64
TTC3-208ENST00000428693 ATP7AQ04656 1500 aa19.07■□□□□ 0.64
TTC3-208ENST00000428693 GGT6Q6P531 493 aa19.06■□□□□ 0.64
TTC3-208ENST00000428693 FBXO41Q8TF61 875 aa19.06■□□□□ 0.64
TTC3-208ENST00000428693 C3P01024 1663 aa19.05■□□□□ 0.64
TTC3-208ENST00000428693 SETD1BQ9UPS6 1966 aaKnown RBP19.03■□□□□ 0.64
TTC3-208ENST00000428693 A2MP01023 1474 aa19.03■□□□□ 0.64
TTC3-208ENST00000428693 NCOA2Q15596 1464 aa19.03■□□□□ 0.64
TTC3-208ENST00000428693 CNTLNQ9NXG0 1405 aa19.02■□□□□ 0.64
TTC3-208ENST00000428693 INO80Q9ULG1 1556 aaPredicted RBP19.01■□□□□ 0.63
TTC3-208ENST00000428693 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
TTC3-208ENST00000428693 ZMYM3Q14202 1370 aa18.98■□□□□ 0.63
TTC3-208ENST00000428693 DMRT2Q9Y5R5 561 aa18.98■□□□□ 0.63
TTC3-208ENST00000428693 CAMSAP2Q08AD1 1489 aa18.97■□□□□ 0.63
TTC3-208ENST00000428693 MBD5Q9P267 1494 aa18.97■□□□□ 0.63
TTC3-208ENST00000428693 CLTCQ00610 1675 aaKnown RBP18.96■□□□□ 0.63
TTC3-208ENST00000428693 ADGBQ8N7X0 1667 aa18.95■□□□□ 0.62
TTC3-208ENST00000428693 APLP2Q06481 763 aa18.95■□□□□ 0.62
TTC3-208ENST00000428693 CERKQ8TCT0 537 aa18.95■□□□□ 0.62
TTC3-208ENST00000428693 TSPY4P0CV99 314 aa18.94■□□□□ 0.62
TTC3-208ENST00000428693 TSPY10P0CW01 314 aa18.94■□□□□ 0.62
TTC3-208ENST00000428693 CCDC141Q6ZP82 1450 aa18.94■□□□□ 0.62
TTC3-208ENST00000428693 LRRC9Q6ZRR7 1453 aa18.94■□□□□ 0.62
TTC3-208ENST00000428693 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
TTC3-208ENST00000428693 KIF3BO15066 747 aa18.93■□□□□ 0.62
TTC3-208ENST00000428693 KANK4Q5T7N3 995 aaPredicted RBP18.93■□□□□ 0.62
TTC3-208ENST00000428693 RSPH4AQ5TD94 716 aa18.92■□□□□ 0.62
TTC3-208ENST00000428693 MROH2AA6NES4 1674 aa18.92■□□□□ 0.62
TTC3-208ENST00000428693 RTEL1-TNFRSF6BF6WH68 1400 aa18.91■□□□□ 0.62
TTC3-208ENST00000428693 STRCQ7RTU9 1775 aa18.91■□□□□ 0.62
TTC3-208ENST00000428693 DHX29Q7Z478 1369 aaKnown RBP18.91■□□□□ 0.62
TTC3-208ENST00000428693 NPATQ14207 1427 aa18.89■□□□□ 0.61
TTC3-208ENST00000428693 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
TTC3-208ENST00000428693 WASHC2CQ9Y4E1 1318 aa18.86■□□□□ 0.61
TTC3-208ENST00000428693 CAMSAP1Q5T5Y3 1602 aa18.85■□□□□ 0.61
TTC3-208ENST00000428693 NCKAP5LQ9HCH0 1330 aa18.85■□□□□ 0.61
TTC3-208ENST00000428693 PTPRKQ15262 1439 aa18.84■□□□□ 0.61
TTC3-208ENST00000428693 ARHGEF5Q12774 1597 aa18.83■□□□□ 0.6
TTC3-208ENST00000428693 NCOA1Q15788 1441 aa18.83■□□□□ 0.6
TTC3-208ENST00000428693 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
TTC3-208ENST00000428693 PTPRTO14522 1441 aa18.82■□□□□ 0.6
TTC3-208ENST00000428693 MYOM3Q5VTT5 1437 aa18.82■□□□□ 0.6
TTC3-208ENST00000428693 MYO3AQ8NEV4 1616 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms