RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 C9orf84Q5VXU9 1444 aa10.55□□□□□ -0.72
CNOT4-206ENST00000428680 IQSEC2Q5JU85 1478 aa10.55□□□□□ -0.72
CNOT4-206ENST00000428680 ZNF518AQ6AHZ1 1483 aa10.54□□□□□ -0.72
CNOT4-206ENST00000428680 PLCH2O75038 1416 aa10.53□□□□□ -0.72
CNOT4-206ENST00000428680 RSPH4AQ5TD94 716 aa10.53□□□□□ -0.72
CNOT4-206ENST00000428680 PPARGC1BQ86YN6 1023 aaKnown RBP10.53□□□□□ -0.72
CNOT4-206ENST00000428680 MYO5CQ9NQX4 1742 aa10.52□□□□□ -0.73
CNOT4-206ENST00000428680 ADAMTSL3P82987 1691 aa10.51□□□□□ -0.73
CNOT4-206ENST00000428680 TROQ12816 1431 aaPredicted RBP10.51□□□□□ -0.73
CNOT4-206ENST00000428680 ATP10AO60312 1499 aa10.51□□□□□ -0.73
CNOT4-206ENST00000428680 BCORL1Q5H9F3 1711 aa10.51□□□□□ -0.73
CNOT4-206ENST00000428680 AGLP35573 1532 aa10.51□□□□□ -0.73
CNOT4-206ENST00000428680 FYCO1Q9BQS8 1478 aa10.5□□□□□ -0.73
CNOT4-206ENST00000428680 TRIM52Q96A61 297 aa10.5□□□□□ -0.73
CNOT4-206ENST00000428680 FAM50AQ14320 339 aaKnown RBP10.5□□□□□ -0.73
CNOT4-206ENST00000428680 ZNF777Q9ULD5 760 aaPredicted RBP10.5□□□□□ -0.73
CNOT4-206ENST00000428680 NUP153P49790 1475 aaKnown RBP10.49□□□□□ -0.73
CNOT4-206ENST00000428680 P3H3Q8IVL6 736 aa10.48□□□□□ -0.73
CNOT4-206ENST00000428680 KCNH8Q96L42 1107 aa10.48□□□□□ -0.73
CNOT4-206ENST00000428680 CASKIN1Q8WXD9 1431 aa10.48□□□□□ -0.73
CNOT4-206ENST00000428680 ARID4BQ4LE39 1312 aaPredicted RBP10.47□□□□□ -0.73
CNOT4-206ENST00000428680 CNGB1Q14028 1251 aaPredicted RBP10.46□□□□□ -0.73
CNOT4-206ENST00000428680 TTC37Q6PGP7 1564 aa10.46□□□□□ -0.73
CNOT4-206ENST00000428680 FBXO41Q8TF61 875 aa10.46□□□□□ -0.74
CNOT4-206ENST00000428680 HECW2Q9P2P5 1572 aa10.46□□□□□ -0.74
CNOT4-206ENST00000428680 KDM4FA0A1W2PPD8 638 aa10.46□□□□□ -0.74
CNOT4-206ENST00000428680 PCF11O94913 1555 aaKnown RBP10.46□□□□□ -0.74
CNOT4-206ENST00000428680 PTPRMP28827 1452 aa10.45□□□□□ -0.74
CNOT4-206ENST00000428680 MLH3Q9UHC1 1453 aa10.45□□□□□ -0.74
CNOT4-206ENST00000428680 NPATQ14207 1427 aa10.45□□□□□ -0.74
CNOT4-206ENST00000428680 KIAA1107Q9UPP5 1409 aa10.44□□□□□ -0.74
CNOT4-206ENST00000428680 ITSN2Q9NZM3 1697 aa10.44□□□□□ -0.74
CNOT4-206ENST00000428680 SLC24A1O60721 1099 aa10.44□□□□□ -0.74
CNOT4-206ENST00000428680 RICTORQ6R327 1708 aa10.44□□□□□ -0.74
CNOT4-206ENST00000428680 CHGAP10645 457 aaKnown RBP10.43□□□□□ -0.74
CNOT4-206ENST00000428680 MROH2AA6NES4 1674 aa10.43□□□□□ -0.74
CNOT4-206ENST00000428680 ARHGAP5Q13017 1502 aa10.43□□□□□ -0.74
CNOT4-206ENST00000428680 PREX1Q8TCU6 1659 aa10.43□□□□□ -0.74
CNOT4-206ENST00000428680 PTPRTO14522 1441 aa10.42□□□□□ -0.74
CNOT4-206ENST00000428680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.42□□□□□ -0.74
CNOT4-206ENST00000428680 UHRF1BP1Q6BDS2 1440 aa10.42□□□□□ -0.74
CNOT4-206ENST00000428680 KDM5CP41229 1560 aa10.42□□□□□ -0.74
CNOT4-206ENST00000428680 ARHGEF12Q9NZN5 1544 aa10.41□□□□□ -0.74
CNOT4-206ENST00000428680 CEP162Q5TB80 1403 aa10.4□□□□□ -0.74
CNOT4-206ENST00000428680 EHBP1L1Q8N3D4 1523 aa10.4□□□□□ -0.74
CNOT4-206ENST00000428680 SCAPERQ9BY12 1400 aa10.4□□□□□ -0.74
CNOT4-206ENST00000428680 PREX2Q70Z35 1606 aa10.4□□□□□ -0.74
CNOT4-206ENST00000428680 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
CNOT4-206ENST00000428680 FER1L4A9Z1Z3 1794 aa10.39□□□□□ -0.75
CNOT4-206ENST00000428680 ACIN1Q9UKV3 1341 aaKnown RBP10.39□□□□□ -0.75
CNOT4-206ENST00000428680 SCAF1Q9H7N4 1312 aaKnown RBP10.38□□□□□ -0.75
CNOT4-206ENST00000428680 FRMPD1Q5SYB0 1578 aa10.38□□□□□ -0.75
CNOT4-206ENST00000428680 C14orf37Q86TY3 774 aa10.37□□□□□ -0.75
CNOT4-206ENST00000428680 ZNF326Q5BKZ1 582 aaKnown RBP10.36□□□□□ -0.75
CNOT4-206ENST00000428680 PKD2Q13563 968 aa10.35□□□□□ -0.75
CNOT4-206ENST00000428680 RIMS1Q86UR5 1692 aaKnown RBP10.35□□□□□ -0.75
CNOT4-206ENST00000428680 ADGBQ8N7X0 1667 aa10.35□□□□□ -0.75
CNOT4-206ENST00000428680 MAP3K1Q13233 1512 aa10.35□□□□□ -0.75
CNOT4-206ENST00000428680 ABCC1P33527 1531 aa10.35□□□□□ -0.75
CNOT4-206ENST00000428680 MADDQ8WXG6 1647 aa10.35□□□□□ -0.75
CNOT4-206ENST00000428680 COL17A1Q9UMD9 1497 aaPredicted RBP10.35□□□□□ -0.75
CNOT4-206ENST00000428680 CCNB3Q8WWL7 1395 aa10.35□□□□□ -0.75
CNOT4-206ENST00000428680 YEATS2Q9ULM3 1422 aa10.34□□□□□ -0.75
CNOT4-206ENST00000428680 A0A0G2JS52 829 aa10.34□□□□□ -0.75
CNOT4-206ENST00000428680 TRAPPC8Q9Y2L5 1435 aa10.34□□□□□ -0.75
CNOT4-206ENST00000428680 PLA2R1Q13018 1463 aa10.34□□□□□ -0.75
CNOT4-206ENST00000428680 ARHGAP35Q9NRY4 1499 aa10.33□□□□□ -0.76
CNOT4-206ENST00000428680 SETD1BQ9UPS6 1966 aaKnown RBP10.32□□□□□ -0.76
CNOT4-206ENST00000428680 MTUS2Q5JR59 1369 aa10.31□□□□□ -0.76
CNOT4-206ENST00000428680 SPAG9O60271 1321 aaKnown RBP10.3□□□□□ -0.76
CNOT4-206ENST00000428680 NEFMP07197 916 aa10.29□□□□□ -0.76
CNOT4-206ENST00000428680 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
CNOT4-206ENST00000428680 ZC3H13Q5T200 1668 aaKnown RBP10.29□□□□□ -0.76
CNOT4-206ENST00000428680 DIP2CQ9Y2E4 1556 aa10.28□□□□□ -0.76
CNOT4-206ENST00000428680 SUPT6HQ7KZ85 1726 aaKnown RBP10.28□□□□□ -0.76
CNOT4-206ENST00000428680 ARHGEF5Q12774 1597 aa10.27□□□□□ -0.77
CNOT4-206ENST00000428680 LMTK3Q96Q04 1460 aa10.27□□□□□ -0.77
CNOT4-206ENST00000428680 PPP1R15AO75807 674 aaPredicted RBP10.26□□□□□ -0.77
CNOT4-206ENST00000428680 CPS1P31327 1500 aa10.26□□□□□ -0.77
CNOT4-206ENST00000428680 ZNF142P52746 1687 aaPredicted RBP10.26□□□□□ -0.77
CNOT4-206ENST00000428680 ATP7AQ04656 1500 aa10.26□□□□□ -0.77
CNOT4-206ENST00000428680 NLRP1Q9C000 1473 aa10.26□□□□□ -0.77
CNOT4-206ENST00000428680 EIF2AK4Q9P2K8 1649 aaKnown RBP10.26□□□□□ -0.77
CNOT4-206ENST00000428680 MIA2Q96PC5 1412 aa10.26□□□□□ -0.77
CNOT4-206ENST00000428680 A2MP01023 1474 aa10.25□□□□□ -0.77
CNOT4-206ENST00000428680 CFDP1Q9UEE9 299 aaPredicted RBP10.25□□□□□ -0.77
CNOT4-206ENST00000428680 CDK13Q14004 1512 aaKnown RBP10.25□□□□□ -0.77
CNOT4-206ENST00000428680 HDGFP51858 240 aaKnown RBP10.25□□□□□ -0.77
CNOT4-206ENST00000428680 CCDC141Q6ZP82 1450 aa10.24□□□□□ -0.77
CNOT4-206ENST00000428680 MAST1Q9Y2H9 1570 aa10.24□□□□□ -0.77
CNOT4-206ENST00000428680 KANK1Q14678 1352 aa10.24□□□□□ -0.77
CNOT4-206ENST00000428680 TSPY4P0CV99 314 aa10.24□□□□□ -0.77
CNOT4-206ENST00000428680 TSPY10P0CW01 314 aa10.24□□□□□ -0.77
CNOT4-206ENST00000428680 INO80Q9ULG1 1556 aaPredicted RBP10.24□□□□□ -0.77
CNOT4-206ENST00000428680 RAPGEF3O95398 923 aa10.23□□□□□ -0.77
CNOT4-206ENST00000428680 CERKQ8TCT0 537 aa10.23□□□□□ -0.77
CNOT4-206ENST00000428680 SAMD9LQ8IVG5 1584 aa10.23□□□□□ -0.77
CNOT4-206ENST00000428680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.23□□□□□ -0.772e-6■■□□□ 11.9
CNOT4-206ENST00000428680 PLEKHG5O94827 1062 aa10.23□□□□□ -0.77
CNOT4-206ENST00000428680 NEFLP07196 543 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms