RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 TCERG1O14776 1098 aaKnown RBP6.94□□□□□ -1.3
RIF1-203ENST00000428287 UGGT2Q9NYU1 1516 aa6.94□□□□□ -1.3
RIF1-203ENST00000428287 RTL5Q5HYW3 569 aaPredicted RBP6.93□□□□□ -1.3
RIF1-203ENST00000428287 HIRIP3Q9BW71 556 aaPredicted RBP6.93□□□□□ -1.3
RIF1-203ENST00000428287 NUDCQ9Y266 331 aa6.93□□□□□ -1.3
RIF1-203ENST00000428287 KDM5CP41229 1560 aa6.93□□□□□ -1.3
RIF1-203ENST00000428287 PNISRQ8TF01 805 aaKnown RBP6.93□□□□□ -1.3
RIF1-203ENST00000428287 CARMIL1Q5VZK9 1371 aa6.93□□□□□ -1.3
RIF1-203ENST00000428287 KTN1Q86UP2 1357 aaKnown RBP6.93□□□□□ -1.3
RIF1-203ENST00000428287 TCOF1Q13428 1488 aaKnown RBP6.93□□□□□ -1.3
RIF1-203ENST00000428287 MYOM3Q5VTT5 1437 aa6.92□□□□□ -1.3
RIF1-203ENST00000428287 PPM1GO15355 546 aaPredicted RBP6.92□□□□□ -1.3
RIF1-203ENST00000428287 KDM6BO15054 1643 aa6.92□□□□□ -1.3
RIF1-203ENST00000428287 GAPVD1Q14C86 1478 aa6.91□□□□□ -1.3
RIF1-203ENST00000428287 IRX6P78412 446 aaPredicted RBP6.91□□□□□ -1.3
RIF1-203ENST00000428287 NBR1Q14596 966 aa6.91□□□□□ -1.3
RIF1-203ENST00000428287 ARID4BQ4LE39 1312 aaPredicted RBP6.91□□□□□ -1.3
RIF1-203ENST00000428287 ANKRD30BQ9BXX2 1392 aa6.91□□□□□ -1.3
RIF1-203ENST00000428287 ADGBQ8N7X0 1667 aa6.91□□□□□ -1.3
RIF1-203ENST00000428287 KIF14Q15058 1648 aa6.9□□□□□ -1.3
RIF1-203ENST00000428287 MBD5Q9P267 1494 aa6.9□□□□□ -1.3
RIF1-203ENST00000428287 EHBP1L1Q8N3D4 1523 aa6.9□□□□□ -1.31
RIF1-203ENST00000428287 GRIN2BQ13224 1484 aa6.89□□□□□ -1.31
RIF1-203ENST00000428287 MRS2Q9HD23 443 aa6.89□□□□□ -1.31
RIF1-203ENST00000428287 DNMT1P26358 1616 aaKnown RBP6.88□□□□□ -1.31
RIF1-203ENST00000428287 ABCA10Q8WWZ4 1543 aa6.88□□□□□ -1.31
RIF1-203ENST00000428287 GSE1Q14687 1217 aa6.88□□□□□ -1.31
RIF1-203ENST00000428287 HSPA5P11021 654 aaKnown RBP6.87□□□□□ -1.31
RIF1-203ENST00000428287 ROCK1Q13464 1354 aa6.87□□□□□ -1.31
RIF1-203ENST00000428287 RSPH6AQ9H0K4 717 aa6.87□□□□□ -1.31
RIF1-203ENST00000428287 KIF7Q2M1P5 1343 aa6.87□□□□□ -1.31
RIF1-203ENST00000428287 ROCK2O75116 1388 aaKnown RBP6.87□□□□□ -1.31
RIF1-203ENST00000428287 ARHGEF12Q9NZN5 1544 aa6.86□□□□□ -1.31
RIF1-203ENST00000428287 NEFMP07197 916 aa6.86□□□□□ -1.31
RIF1-203ENST00000428287 PDE4AP27815 886 aa6.86□□□□□ -1.31
RIF1-203ENST00000428287 MYO5CQ9NQX4 1742 aa6.86□□□□□ -1.31
RIF1-203ENST00000428287 PDE3BQ13370 1112 aa6.86□□□□□ -1.31
RIF1-203ENST00000428287 LAMC1P11047 1609 aa6.86□□□□□ -1.31
RIF1-203ENST00000428287 L3MBTL2Q969R5 705 aa6.86□□□□□ -1.31
RIF1-203ENST00000428287 CROCC2H7BZ55 1655 aa6.85□□□□□ -1.31
RIF1-203ENST00000428287 BRD4O60885 1362 aaPredicted RBP6.85□□□□□ -1.31
RIF1-203ENST00000428287 MYH10P35580 1976 aa6.85□□□□□ -1.31
RIF1-203ENST00000428287 MAGI3Q5TCQ9 1506 aa6.85□□□□□ -1.31
RIF1-203ENST00000428287 FAM43AQ8N2R8 423 aa6.85□□□□□ -1.31
RIF1-203ENST00000428287 FAM50AQ14320 339 aaKnown RBP6.85□□□□□ -1.31
RIF1-203ENST00000428287 UHRF1BP1Q6BDS2 1440 aa6.84□□□□□ -1.31
RIF1-203ENST00000428287 DNMBPQ6XZF7 1577 aa6.84□□□□□ -1.31
RIF1-203ENST00000428287 NFKBIBQ15653 356 aa6.83□□□□□ -1.32
RIF1-203ENST00000428287 MTUS2Q5JR59 1369 aa6.83□□□□□ -1.32
RIF1-203ENST00000428287 PLEKHH2Q8IVE3 1493 aa6.83□□□□□ -1.32
RIF1-203ENST00000428287 CDC42BPAQ5VT25 1732 aa6.83□□□□□ -1.32
RIF1-203ENST00000428287 ITSN2Q9NZM3 1697 aa6.82□□□□□ -1.32
RIF1-203ENST00000428287 FHOD3Q2V2M9 1422 aa6.82□□□□□ -1.32
RIF1-203ENST00000428287 TRPM1Q7Z4N2 1603 aa6.82□□□□□ -1.32
RIF1-203ENST00000428287 NBPF8Q3BBV2 869 aa6.82□□□□□ -1.32
RIF1-203ENST00000428287 ZNF608Q9ULD9 1512 aaPredicted RBP6.82□□□□□ -1.32
RIF1-203ENST00000428287 FAM9BQ8IZU0 186 aa6.82□□□□□ -1.32
RIF1-203ENST00000428287 CFAP65Q6ZU64 1925 aaKnown RBP6.81□□□□□ -1.32
RIF1-203ENST00000428287 RRP1P56182 461 aaKnown RBP6.81□□□□□ -1.32
RIF1-203ENST00000428287 BRPF3Q9ULD4 1205 aa6.81□□□□□ -1.32
RIF1-203ENST00000428287 RALGAPBQ86X10 1494 aa6.81□□□□□ -1.32
RIF1-203ENST00000428287 RANGAP1P46060 587 aaPredicted RBP6.81□□□□□ -1.32
RIF1-203ENST00000428287 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
RIF1-203ENST00000428287 NESP48681 1621 aa6.8□□□□□ -1.32
RIF1-203ENST00000428287 DCAF11Q8TEB1 546 aa6.8□□□□□ -1.32
RIF1-203ENST00000428287 MPHOSPH9Q99550 1183 aa6.8□□□□□ -1.32
RIF1-203ENST00000428287 CLASP1Q7Z460 1538 aa6.8□□□□□ -1.32
RIF1-203ENST00000428287 PARD3Q8TEW0 1356 aa6.79□□□□□ -1.32
RIF1-203ENST00000428287 PZPP20742 1482 aa6.79□□□□□ -1.32
RIF1-203ENST00000428287 ZMYM3Q14202 1370 aa6.79□□□□□ -1.32
RIF1-203ENST00000428287 KDM2BQ8NHM5 1336 aa6.79□□□□□ -1.32
RIF1-203ENST00000428287 CADPSQ9ULU8 1353 aa6.79□□□□□ -1.32
RIF1-203ENST00000428287 POLA1P09884 1462 aaPredicted RBP6.79□□□□□ -1.32
RIF1-203ENST00000428287 RCAN3Q9UKA8 241 aa6.79□□□□□ -1.32
RIF1-203ENST00000428287 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.78□□□□□ -1.32
RIF1-203ENST00000428287 BLMP54132 1417 aaPredicted RBP6.78□□□□□ -1.32
RIF1-203ENST00000428287 PER1O15534 1290 aaPredicted RBP6.78□□□□□ -1.32
RIF1-203ENST00000428287 CCDC144AA2RUR9 1427 aa6.78□□□□□ -1.32
RIF1-203ENST00000428287 SHROOM2Q13796 1616 aa6.78□□□□□ -1.32
RIF1-203ENST00000428287 RRP9O43818 475 aaKnown RBP6.78□□□□□ -1.32
RIF1-203ENST00000428287 USP47Q96K76 1375 aa6.78□□□□□ -1.32
RIF1-203ENST00000428287 FSD2A1L4K1 749 aa6.78□□□□□ -1.32
RIF1-203ENST00000428287 CEP170Q5SW79 1584 aa6.77□□□□□ -1.33
RIF1-203ENST00000428287 ADCY10Q96PN6 1610 aa6.77□□□□□ -1.33
RIF1-203ENST00000428287 EPRSP07814 1512 aaKnown RBP6.77□□□□□ -1.33
RIF1-203ENST00000428287 NLRP13Q86W25 1043 aa6.77□□□□□ -1.33
RIF1-203ENST00000428287 ADGRL2O95490 1459 aa6.77□□□□□ -1.33
RIF1-203ENST00000428287 NLRP1Q9C000 1473 aa6.77□□□□□ -1.33
RIF1-203ENST00000428287 CLCN1P35523 988 aa6.77□□□□□ -1.33
RIF1-203ENST00000428287 KIF15Q9NS87 1388 aa6.76□□□□□ -1.33
RIF1-203ENST00000428287 TOPBP1Q92547 1522 aa6.76□□□□□ -1.33
RIF1-203ENST00000428287 FRAT1Q92837 279 aaPredicted RBP6.76□□□□□ -1.33
RIF1-203ENST00000428287 ANTXR1Q9H6X2 564 aa6.76□□□□□ -1.33
RIF1-203ENST00000428287 CENPJQ9HC77 1338 aaPredicted RBP6.76□□□□□ -1.33
RIF1-203ENST00000428287 RALBP1Q15311 655 aa6.76□□□□□ -1.33
RIF1-203ENST00000428287 RTN4Q9NQC3 1192 aaKnown RBP6.76□□□□□ -1.33
RIF1-203ENST00000428287 ZNF521Q96K83 1311 aa6.76□□□□□ -1.33
RIF1-203ENST00000428287 TMC1Q8TDI8 760 aa6.76□□□□□ -1.33
RIF1-203ENST00000428287 KDM5DQ9BY66 1539 aa6.75□□□□□ -1.33
RIF1-203ENST00000428287 USP19O94966 1318 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms