RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 APLP2Q06481 763 aa35.6■■■■□ 3.29
SDHAP1-204ENST00000427415 EFCAB2Q5VUJ9 269 aa35.59■■■■□ 3.29
SDHAP1-204ENST00000427415 LRRC9Q6ZRR7 1453 aa35.59■■■■□ 3.29
SDHAP1-204ENST00000427415 ADGRL1O94910 1474 aa35.54■■■■□ 3.28
SDHAP1-204ENST00000427415 CCNB3Q8WWL7 1395 aa35.54■■■■□ 3.28
SDHAP1-204ENST00000427415 ITSN2Q9NZM3 1697 aa35.54■■■■□ 3.28
SDHAP1-204ENST00000427415 DENND4BO75064 1496 aaPredicted RBP35.52■■■■□ 3.28
SDHAP1-204ENST00000427415 GPATCH8Q9UKJ3 1502 aaKnown RBP35.52■■■■□ 3.28
SDHAP1-204ENST00000427415 RICTORQ6R327 1708 aa35.51■■■■□ 3.27
SDHAP1-204ENST00000427415 NCOA2Q15596 1464 aa35.49■■■■□ 3.27
SDHAP1-204ENST00000427415 FRMPD1Q5SYB0 1578 aa35.49■■■■□ 3.27
SDHAP1-204ENST00000427415 SCAPERQ9BY12 1400 aa35.45■■■■□ 3.27
SDHAP1-204ENST00000427415 RAPGEF3O95398 923 aa35.43■■■■□ 3.26
SDHAP1-204ENST00000427415 KANK4Q5T7N3 995 aaPredicted RBP35.43■■■■□ 3.26
SDHAP1-204ENST00000427415 ABCC1P33527 1531 aa35.42■■■■□ 3.26
SDHAP1-204ENST00000427415 POGZQ7Z3K3 1410 aa35.4■■■■□ 3.26
SDHAP1-204ENST00000427415 CFDP1Q9UEE9 299 aaPredicted RBP35.4■■■■□ 3.26
SDHAP1-204ENST00000427415 SAMD9LQ8IVG5 1584 aa35.39■■■■□ 3.26
SDHAP1-204ENST00000427415 ZMYM4Q5VZL5 1548 aa35.37■■■■□ 3.25
SDHAP1-204ENST00000427415 ZNF518AQ6AHZ1 1483 aa35.35■■■■□ 3.25
SDHAP1-204ENST00000427415 ZNF777Q9ULD5 760 aaPredicted RBP35.34■■■■□ 3.25
SDHAP1-204ENST00000427415 PLEKHH2Q8IVE3 1493 aa35.34■■■■□ 3.25
SDHAP1-204ENST00000427415 SYCP2Q9BX26 1530 aa35.29■■■■□ 3.24
SDHAP1-204ENST00000427415 KDM5CP41229 1560 aa35.29■■■■□ 3.24
SDHAP1-204ENST00000427415 MAGI2Q86UL8 1455 aa35.28■■■■□ 3.24
SDHAP1-204ENST00000427415 ARHGEF40Q8TER5 1519 aa35.27■■■■□ 3.24
SDHAP1-204ENST00000427415 ARHGEF12Q9NZN5 1544 aa35.27■■■■□ 3.24
SDHAP1-204ENST00000427415 KIAA1107Q9UPP5 1409 aa35.26■■■■□ 3.24
SDHAP1-204ENST00000427415 MYOM3Q5VTT5 1437 aa35.24■■■■□ 3.23
SDHAP1-204ENST00000427415 ZFYVE16Q7Z3T8 1539 aa35.24■■■■□ 3.23
SDHAP1-204ENST00000427415 TRAPPC8Q9Y2L5 1435 aa35.22■■■■□ 3.23
SDHAP1-204ENST00000427415 HECW2Q9P2P5 1572 aa35.21■■■■□ 3.23
SDHAP1-204ENST00000427415 CAMSAP2Q08AD1 1489 aa35.21■■■■□ 3.23
SDHAP1-204ENST00000427415 MIA2Q96PC5 1412 aa35.18■■■■□ 3.22
SDHAP1-204ENST00000427415 AFAP1Q8N556 730 aa35.18■■■■□ 3.22
SDHAP1-204ENST00000427415 ZNF644Q9H582 1327 aaPredicted RBP35.16■■■■□ 3.22
SDHAP1-204ENST00000427415 HNRNPMP52272 730 aaKnown RBP eCLIP35.15■■■■□ 3.22
SDHAP1-204ENST00000427415 MLH3Q9UHC1 1453 aa35.14■■■■□ 3.22
SDHAP1-204ENST00000427415 YEATS2Q9ULM3 1422 aa35.14■■■■□ 3.22
SDHAP1-204ENST00000427415 MYT1LQ9UL68 1186 aa35.1■■■■□ 3.21
SDHAP1-204ENST00000427415 MBD5Q9P267 1494 aa35.09■■■■□ 3.21
SDHAP1-204ENST00000427415 KIDINS220Q9ULH0 1771 aa35.08■■■■□ 3.21
SDHAP1-204ENST00000427415 ARHGEF5Q12774 1597 aa35.07■■■■□ 3.2
SDHAP1-204ENST00000427415 ABCA6Q8N139 1617 aa35.06■■■■□ 3.2
SDHAP1-204ENST00000427415 PTPN23Q9H3S7 1636 aa35.06■■■■□ 3.2
SDHAP1-204ENST00000427415 DIP2CQ9Y2E4 1556 aa35.05■■■■□ 3.2
SDHAP1-204ENST00000427415 CCDC141Q6ZP82 1450 aa35.05■■■■□ 3.2
SDHAP1-204ENST00000427415 FGD6Q6ZV73 1430 aa35.05■■■■□ 3.2
SDHAP1-204ENST00000427415 SPAG9O60271 1321 aaKnown RBP35.05■■■■□ 3.2
SDHAP1-204ENST00000427415 INO80Q9ULG1 1556 aaPredicted RBP35.04■■■■□ 3.2
SDHAP1-204ENST00000427415 ATP10AO60312 1499 aa35.04■■■■□ 3.2
SDHAP1-204ENST00000427415 ATP7AQ04656 1500 aa35.03■■■■□ 3.2
SDHAP1-204ENST00000427415 C9orf84Q5VXU9 1444 aa35.03■■■■□ 3.2
SDHAP1-204ENST00000427415 RSPH4AQ5TD94 716 aa35.02■■■■□ 3.2
SDHAP1-204ENST00000427415 REREQ9P2R6 1566 aa34.98■■■■□ 3.19
SDHAP1-204ENST00000427415 TCOF1Q13428 1488 aaKnown RBP34.97■■■■□ 3.19
SDHAP1-204ENST00000427415 ARID4BQ4LE39 1312 aaPredicted RBP34.96■■■■□ 3.19
SDHAP1-204ENST00000427415 SIGLEC1Q9BZZ2 1709 aa34.95■■■■□ 3.19
SDHAP1-204ENST00000427415 BCORL1Q5H9F3 1711 aa34.94■■■■□ 3.18
SDHAP1-204ENST00000427415 RTEL1-TNFRSF6BF6WH68 1400 aa34.93■■■■□ 3.18
SDHAP1-204ENST00000427415 PPARGC1BQ86YN6 1023 aaKnown RBP34.91■■■■□ 3.18
SDHAP1-204ENST00000427415 ADGBQ8N7X0 1667 aa34.9■■■■□ 3.18
SDHAP1-204ENST00000427415 KDM4FA0A1W2PPD8 638 aa34.9■■■■□ 3.18
SDHAP1-204ENST00000427415 CROCC2H7BZ55 1655 aa34.89■■■■□ 3.18
SDHAP1-204ENST00000427415 MAST1Q9Y2H9 1570 aa34.87■■■■□ 3.17
SDHAP1-204ENST00000427415 TSPY4P0CV99 314 aa34.87■■■■□ 3.17
SDHAP1-204ENST00000427415 TSPY10P0CW01 314 aa34.87■■■■□ 3.17
SDHAP1-204ENST00000427415 DNMT1P26358 1616 aaKnown RBP34.86■■■■□ 3.17
SDHAP1-204ENST00000427415 ADAMTSL3P82987 1691 aa34.85■■■■□ 3.17
SDHAP1-204ENST00000427415 AGLP35573 1532 aa34.84■■■■□ 3.17
SDHAP1-204ENST00000427415 A2MP01023 1474 aa34.81■■■■□ 3.16
SDHAP1-204ENST00000427415 SHANK2Q9UPX8 1470 aa34.81■■■■□ 3.16
SDHAP1-204ENST00000427415 PLXNC1O60486 1568 aa34.8■■■■□ 3.16
SDHAP1-204ENST00000427415 DAPK1P53355 1430 aa34.8■■■■□ 3.16
SDHAP1-204ENST00000427415 FAM50AQ14320 339 aaKnown RBP34.78■■■■□ 3.16
SDHAP1-204ENST00000427415 AEBP2Q6ZN18 517 aaPredicted RBP34.78■■■■□ 3.16
SDHAP1-204ENST00000427415 ABCC5O15440 1437 aa34.78■■■■□ 3.16
SDHAP1-204ENST00000427415 MADDQ8WXG6 1647 aa34.77■■■■□ 3.16
SDHAP1-204ENST00000427415 FER1L4A9Z1Z3 1794 aa34.74■■■■□ 3.15
SDHAP1-204ENST00000427415 MLECQ14165 292 aa34.71■■■■□ 3.15
SDHAP1-204ENST00000427415 RIMS1Q86UR5 1692 aaKnown RBP34.7■■■■□ 3.14
SDHAP1-204ENST00000427415 DHX29Q7Z478 1369 aaKnown RBP34.69■■■■□ 3.14
SDHAP1-204ENST00000427415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.66■■■■□ 3.14
SDHAP1-204ENST00000427415 RRBP1Q9P2E9 1410 aaKnown RBP34.64■■■■□ 3.14
SDHAP1-204ENST00000427415 PTPRMP28827 1452 aa34.61■■■■□ 3.13
SDHAP1-204ENST00000427415 DUOX2Q9NRD8 1548 aa34.6■■■■□ 3.13
SDHAP1-204ENST00000427415 ANKRD30AQ9BXX3 1397 aa34.6■■■■□ 3.13
SDHAP1-204ENST00000427415 KIF15Q9NS87 1388 aa34.59■■■■□ 3.13
SDHAP1-204ENST00000427415 EIF2AK4Q9P2K8 1649 aaKnown RBP34.59■■■■□ 3.13
SDHAP1-204ENST00000427415 ADGRL2O95490 1459 aa34.58■■■■□ 3.13
SDHAP1-204ENST00000427415 CHIC2Q9UKJ5 165 aa34.56■■■■□ 3.12
SDHAP1-204ENST00000427415 ESF1Q9H501 851 aaKnown RBP34.53■■■■□ 3.12
SDHAP1-204ENST00000427415 KIF3BO15066 747 aa34.52■■■■□ 3.12
SDHAP1-204ENST00000427415 NCOA1Q15788 1441 aa34.52■■■■□ 3.12
SDHAP1-204ENST00000427415 ERBINQ96RT1 1412 aa34.51■■■■□ 3.12
SDHAP1-204ENST00000427415 RRP7BPQ9NSQ0 103 aa34.51■■■■□ 3.12
SDHAP1-204ENST00000427415 CNTLNQ9NXG0 1405 aa34.51■■■■□ 3.12
SDHAP1-204ENST00000427415 GGT6Q6P531 493 aa34.5■■■■□ 3.11
SDHAP1-204ENST00000427415 RNF17Q9BXT8 1623 aaKnown RBP34.49■■■■□ 3.11
SDHAP1-204ENST00000427415 MROH2AA6NES4 1674 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms