RNA–Protein interactions for RNA: ENST00000426910.1

CROCCP1-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 1, humanhuman

BASIC

Gene CROCCP1, Length 5,675 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP1-201ENST00000426910 TIMELESSQ9UNS1 1208 aa21.75■■□□□ 1.07
CROCCP1-201ENST00000426910 TMF1P82094 1093 aa21.73■■□□□ 1.07
CROCCP1-201ENST00000426910 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
CROCCP1-201ENST00000426910 PLCB2Q00722 1185 aa21.71■■□□□ 1.07
CROCCP1-201ENST00000426910 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
CROCCP1-201ENST00000426910 NCBP3Q53F19 620 aaKnown RBP21.7■■□□□ 1.06
CROCCP1-201ENST00000426910 NUDCQ9Y266 331 aa21.69■■□□□ 1.06
CROCCP1-201ENST00000426910 PKD2Q13563 968 aa21.68■■□□□ 1.06
CROCCP1-201ENST00000426910 RCAN3Q9UKA8 241 aa21.67■■□□□ 1.06
CROCCP1-201ENST00000426910 WIZO95785 1651 aa21.66■■□□□ 1.06
CROCCP1-201ENST00000426910 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
CROCCP1-201ENST00000426910 OS9Q13438 667 aaPredicted RBP21.66■■□□□ 1.06
CROCCP1-201ENST00000426910 NAP1L2Q9ULW6 460 aaPredicted RBP21.66■■□□□ 1.06
CROCCP1-201ENST00000426910 FGD1P98174 961 aa21.64■■□□□ 1.06
CROCCP1-201ENST00000426910 MPHOSPH9Q99550 1183 aa21.64■■□□□ 1.06
CROCCP1-201ENST00000426910 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.64■■□□□ 1.05
CROCCP1-201ENST00000426910 HSCBQ8IWL3 235 aa21.64■■□□□ 1.05
CROCCP1-201ENST00000426910 KTN1Q86UP2 1357 aaKnown RBP21.63■■□□□ 1.05
CROCCP1-201ENST00000426910 GOLGA2Q08379 1002 aa21.62■■□□□ 1.05
CROCCP1-201ENST00000426910 SAFB2Q14151 953 aaKnown RBP eCLIP21.62■■□□□ 1.05
CROCCP1-201ENST00000426910 SLKQ9H2G2 1235 aaPredicted RBP21.6■■□□□ 1.05
CROCCP1-201ENST00000426910 PNNQ9H307 717 aaKnown RBP21.6■■□□□ 1.05
CROCCP1-201ENST00000426910 CLSTN1O94985 981 aa21.6■■□□□ 1.05
CROCCP1-201ENST00000426910 GZF1Q9H116 711 aaPredicted RBP21.6■■□□□ 1.05
CROCCP1-201ENST00000426910 MLECQ14165 292 aa21.59■■□□□ 1.05
CROCCP1-201ENST00000426910 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
CROCCP1-201ENST00000426910 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
CROCCP1-201ENST00000426910 MORC1Q86VD1 984 aa21.58■■□□□ 1.05
CROCCP1-201ENST00000426910 KCNJ4P48050 445 aa21.58■■□□□ 1.04
CROCCP1-201ENST00000426910 SMARCA4P51532 1647 aa21.58■■□□□ 1.04
CROCCP1-201ENST00000426910 RAPGEF2Q9Y4G8 1499 aa21.57■■□□□ 1.04
CROCCP1-201ENST00000426910 DHX57Q6P158 1386 aaKnown RBP21.57■■□□□ 1.04
CROCCP1-201ENST00000426910 ROCK2O75116 1388 aaKnown RBP21.56■■□□□ 1.04
CROCCP1-201ENST00000426910 L3MBTL2Q969R5 705 aa21.55■■□□□ 1.04
CROCCP1-201ENST00000426910 IPO9Q96P70 1041 aaKnown RBP21.55■■□□□ 1.04
CROCCP1-201ENST00000426910 SOX12O15370 315 aa21.54■■□□□ 1.04
CROCCP1-201ENST00000426910 RUSC2Q8N2Y8 1516 aa21.54■■□□□ 1.04
CROCCP1-201ENST00000426910 APBB1O00213 710 aa21.53■■□□□ 1.04
CROCCP1-201ENST00000426910 TCERG1O14776 1098 aaKnown RBP21.53■■□□□ 1.04
CROCCP1-201ENST00000426910 L1TD1Q5T7N2 865 aaKnown RBP21.53■■□□□ 1.04
CROCCP1-201ENST00000426910 MS4A1P11836 297 aa21.52■■□□□ 1.04
CROCCP1-201ENST00000426910 ANKRD30AQ9BXX3 1397 aa21.52■■□□□ 1.04
CROCCP1-201ENST00000426910 GGT6Q6P531 493 aa21.52■■□□□ 1.04
CROCCP1-201ENST00000426910 ISY1Q9ULR0 285 aaKnown RBP21.51■■□□□ 1.03
CROCCP1-201ENST00000426910 GOLGA6L6A8MZA4 724 aa21.5■■□□□ 1.03
CROCCP1-201ENST00000426910 SRPK2P78362 688 aaKnown RBP21.5■■□□□ 1.03
CROCCP1-201ENST00000426910 CCDC146Q8IYE0 955 aa21.49■■□□□ 1.03
CROCCP1-201ENST00000426910 CHMP4BQ9H444 224 aaKnown RBP21.49■■□□□ 1.03
CROCCP1-201ENST00000426910 RALBP1Q15311 655 aa21.48■■□□□ 1.03
CROCCP1-201ENST00000426910 FHOD3Q2V2M9 1422 aa21.47■■□□□ 1.03
CROCCP1-201ENST00000426910 CCDC18Q5T9S5 1454 aa21.46■■□□□ 1.03
CROCCP1-201ENST00000426910 MSNP26038 577 aaKnown RBP21.46■■□□□ 1.03
CROCCP1-201ENST00000426910 NUP155O75694 1391 aa21.46■■□□□ 1.03
CROCCP1-201ENST00000426910 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.02
CROCCP1-201ENST00000426910 ITPRIPQ8IWB1 547 aa21.45■■□□□ 1.02
CROCCP1-201ENST00000426910 STK26Q9P289 416 aa21.45■■□□□ 1.02
CROCCP1-201ENST00000426910 RSPH4AQ5TD94 716 aa21.44■■□□□ 1.02
CROCCP1-201ENST00000426910 ARID3AQ99856 593 aa21.44■■□□□ 1.02
CROCCP1-201ENST00000426910 GOLGA6L4A6NEF3 574 aa21.43■■□□□ 1.02
CROCCP1-201ENST00000426910 MFAP1P55081 439 aaKnown RBP21.43■■□□□ 1.02
CROCCP1-201ENST00000426910 SLC4A3P48751 1232 aa21.42■■□□□ 1.02
CROCCP1-201ENST00000426910 PLIN1O60240 522 aa21.41■■□□□ 1.02
CROCCP1-201ENST00000426910 U2AF1L5P0DN76 240 aaPredicted RBP21.4■■□□□ 1.02
CROCCP1-201ENST00000426910 U2AF1Q01081 240 aaKnown RBP eCLIP21.4■■□□□ 1.02
CROCCP1-201ENST00000426910 CLUAP1Q96AJ1 413 aa21.4■■□□□ 1.02
CROCCP1-201ENST00000426910 HDGFL2Q7Z4V5 671 aaPredicted RBP21.4■■□□□ 1.02
CROCCP1-201ENST00000426910 NRDCO43847 1150 aa21.39■■□□□ 1.02
CROCCP1-201ENST00000426910 FOXD4L1Q9NU39 408 aa21.38■■□□□ 1.01
CROCCP1-201ENST00000426910 EIF3AQ14152 1382 aaKnown RBP21.37■■□□□ 1.01
CROCCP1-201ENST00000426910 RWDD1Q9H446 243 aaPredicted RBP21.36■■□□□ 1.01
CROCCP1-201ENST00000426910 JPH4Q96JJ6 628 aa21.36■■□□□ 1.01
CROCCP1-201ENST00000426910 EXOC6Q8TAG9 804 aa21.34■■□□□ 1.01
CROCCP1-201ENST00000426910 SPAG9O60271 1321 aaKnown RBP21.34■■□□□ 1.01
CROCCP1-201ENST00000426910 HNRNPMP52272 730 aaKnown RBP eCLIP21.32■■□□□ 1
CROCCP1-201ENST00000426910 GBP4Q96PP9 640 aa21.31■■□□□ 1
CROCCP1-201ENST00000426910 KIF3BO15066 747 aa21.31■■□□□ 1
CROCCP1-201ENST00000426910 MCCP23508 829 aa21.31■■□□□ 1
CROCCP1-201ENST00000426910 DRC7Q8IY82 874 aa21.31■■□□□ 1
CROCCP1-201ENST00000426910 NLRP13Q86W25 1043 aa21.3■■□□□ 1
CROCCP1-201ENST00000426910 GNL2Q13823 731 aaKnown RBP21.3■■□□□ 1
CROCCP1-201ENST00000426910 PRKRIP1Q9H875 184 aaPredicted RBP21.3■■□□□ 1
CROCCP1-201ENST00000426910 GOLGA6L3A6NEY3 463 aa21.29■■□□□ 1
CROCCP1-201ENST00000426910 PDE4AP27815 886 aa21.29■■□□□ 1
CROCCP1-201ENST00000426910 ZNF330Q9Y3S2 320 aaPredicted RBP21.29■■□□□ 1
CROCCP1-201ENST00000426910 SMC4Q9NTJ3 1288 aa21.29■■□□□ 1
CROCCP1-201ENST00000426910 IPO8O15397 1037 aaKnown RBP21.29■■□□□ 1
CROCCP1-201ENST00000426910 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
CROCCP1-201ENST00000426910 PMFBP1Q8TBY8 1022 aa21.28■■□□□ 1
CROCCP1-201ENST00000426910 ST20-MTHFSA0A0A6YYL1 179 aa21.28■■□□□ 1
CROCCP1-201ENST00000426910 NUTM2DQ5VT03 806 aaPredicted RBP21.28■■□□□ 1
CROCCP1-201ENST00000426910 AMER1Q5JTC6 1135 aaPredicted RBP21.27■■□□□ 1
CROCCP1-201ENST00000426910 EID1Q9Y6B2 187 aa21.27■■□□□ 1
CROCCP1-201ENST00000426910 CHAF1AQ13111 956 aaPredicted RBP21.26■□□□□ 0.99
CROCCP1-201ENST00000426910 RTF1Q92541 710 aaKnown RBP21.26■□□□□ 0.99
CROCCP1-201ENST00000426910 CRBNQ96SW2 442 aa21.26■□□□□ 0.99
CROCCP1-201ENST00000426910 CENPJQ9HC77 1338 aaPredicted RBP21.25■□□□□ 0.99
CROCCP1-201ENST00000426910 KIF15Q9NS87 1388 aa21.25■□□□□ 0.99
CROCCP1-201ENST00000426910 MYBBP1AQ9BQG0 1328 aaKnown RBP21.25■□□□□ 0.99
CROCCP1-201ENST00000426910 RRP1P56182 461 aaKnown RBP21.24■□□□□ 0.99
CROCCP1-201ENST00000426910 WASHC2CQ9Y4E1 1318 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms