RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 MYO5CQ9NQX4 1742 aa22.52■■□□□ 1.2
GINS3-203ENST00000426538 PTPRKQ15262 1439 aa22.52■■□□□ 1.2
GINS3-203ENST00000426538 CDC42BPBQ9Y5S2 1711 aa22.51■■□□□ 1.19
GINS3-203ENST00000426538 ARHGAP5Q13017 1502 aa22.51■■□□□ 1.19
GINS3-203ENST00000426538 PLCH2O75038 1416 aa22.51■■□□□ 1.19
GINS3-203ENST00000426538 SETD5Q9C0A6 1442 aa22.51■■□□□ 1.19
GINS3-203ENST00000426538 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
GINS3-203ENST00000426538 DAPK1P53355 1430 aa22.5■■□□□ 1.19
GINS3-203ENST00000426538 EFCAB2Q5VUJ9 269 aa22.49■■□□□ 1.19
GINS3-203ENST00000426538 DNMT1P26358 1616 aaKnown RBP22.48■■□□□ 1.19
GINS3-203ENST00000426538 ABCC5O15440 1437 aa22.47■■□□□ 1.19
GINS3-203ENST00000426538 HRCP23327 699 aa22.47■■□□□ 1.19
GINS3-203ENST00000426538 ABCA9Q8IUA7 1624 aa22.46■■□□□ 1.19
GINS3-203ENST00000426538 RSPH4AQ5TD94 716 aa22.45■■□□□ 1.19
GINS3-203ENST00000426538 RAB3GAP2Q9H2M9 1393 aa22.45■■□□□ 1.18
GINS3-203ENST00000426538 MAPKBP1O60336 1514 aa22.45■■□□□ 1.18
GINS3-203ENST00000426538 HNRNPMP52272 730 aaKnown RBP eCLIP22.45■■□□□ 1.18
GINS3-203ENST00000426538 TSPY4P0CV99 314 aa22.43■■□□□ 1.18
GINS3-203ENST00000426538 TSPY10P0CW01 314 aa22.43■■□□□ 1.18
GINS3-203ENST00000426538 HFM1A2PYH4 1435 aa22.43■■□□□ 1.18
GINS3-203ENST00000426538 SAMD9LQ8IVG5 1584 aa22.43■■□□□ 1.18
GINS3-203ENST00000426538 RRP7BPQ9NSQ0 103 aa22.43■■□□□ 1.18
GINS3-203ENST00000426538 ARAP3Q8WWN8 1544 aa22.42■■□□□ 1.18
GINS3-203ENST00000426538 PLEKHH2Q8IVE3 1493 aa22.42■■□□□ 1.18
GINS3-203ENST00000426538 ZEB1P37275 1124 aaPredicted RBP22.4■■□□□ 1.18
GINS3-203ENST00000426538 ROCK1Q13464 1354 aa22.4■■□□□ 1.18
GINS3-203ENST00000426538 AKNAQ7Z591 1439 aa22.39■■□□□ 1.18
GINS3-203ENST00000426538 NAIPQ13075 1403 aa22.39■■□□□ 1.17
GINS3-203ENST00000426538 KIAA1107Q9UPP5 1409 aa22.39■■□□□ 1.17
GINS3-203ENST00000426538 MBD5Q9P267 1494 aa22.38■■□□□ 1.17
GINS3-203ENST00000426538 ARHGEF5Q12774 1597 aa22.38■■□□□ 1.17
GINS3-203ENST00000426538 CD109Q6YHK3 1445 aa22.37■■□□□ 1.17
GINS3-203ENST00000426538 FANCAO15360 1455 aa22.36■■□□□ 1.17
GINS3-203ENST00000426538 SYCP2Q9BX26 1530 aa22.35■■□□□ 1.17
GINS3-203ENST00000426538 CCDC141Q6ZP82 1450 aa22.35■■□□□ 1.17
GINS3-203ENST00000426538 CROCC2H7BZ55 1655 aa22.34■■□□□ 1.17
GINS3-203ENST00000426538 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
GINS3-203ENST00000426538 SHANK2Q9UPX8 1470 aa22.33■■□□□ 1.17
GINS3-203ENST00000426538 C9orf84Q5VXU9 1444 aa22.33■■□□□ 1.16
GINS3-203ENST00000426538 NCOA1Q15788 1441 aa22.32■■□□□ 1.16
GINS3-203ENST00000426538 ADGRL2O95490 1459 aa22.3■■□□□ 1.16
GINS3-203ENST00000426538 GCC2Q8IWJ2 1684 aa22.3■■□□□ 1.16
GINS3-203ENST00000426538 ADGBQ8N7X0 1667 aa22.3■■□□□ 1.16
GINS3-203ENST00000426538 DHX57Q6P158 1386 aaKnown RBP22.3■■□□□ 1.16
GINS3-203ENST00000426538 FAM69CQ0P6D2 419 aa22.3■■□□□ 1.16
GINS3-203ENST00000426538 ABCC1P33527 1531 aa22.3■■□□□ 1.16
GINS3-203ENST00000426538 ARHGEF12Q9NZN5 1544 aa22.28■■□□□ 1.16
GINS3-203ENST00000426538 ACIN1Q9UKV3 1341 aaKnown RBP22.28■■□□□ 1.16
GINS3-203ENST00000426538 GLI2P10070 1586 aa22.27■■□□□ 1.16
GINS3-203ENST00000426538 ADGRL1O94910 1474 aa22.26■■□□□ 1.15
GINS3-203ENST00000426538 CFAP74Q9C0B2 1584 aa22.25■■□□□ 1.15
GINS3-203ENST00000426538 CLSPNQ9HAW4 1339 aa22.25■■□□□ 1.15
GINS3-203ENST00000426538 SCAPERQ9BY12 1400 aa22.24■■□□□ 1.15
GINS3-203ENST00000426538 TRAPPC8Q9Y2L5 1435 aa22.23■■□□□ 1.15
GINS3-203ENST00000426538 AFAP1Q8N556 730 aa22.23■■□□□ 1.15
GINS3-203ENST00000426538 TRIM52Q96A61 297 aa22.23■■□□□ 1.15
GINS3-203ENST00000426538 DIP2BQ9P265 1576 aa22.22■■□□□ 1.15
GINS3-203ENST00000426538 MAP3K4Q9Y6R4 1608 aa22.22■■□□□ 1.15
GINS3-203ENST00000426538 MAST1Q9Y2H9 1570 aa22.22■■□□□ 1.15
GINS3-203ENST00000426538 DNAJC5Q9H3Z4 198 aa22.21■■□□□ 1.15
GINS3-203ENST00000426538 KIF15Q9NS87 1388 aa22.21■■□□□ 1.15
GINS3-203ENST00000426538 SPAG9O60271 1321 aaKnown RBP22.2■■□□□ 1.15
GINS3-203ENST00000426538 NEO1Q92859 1461 aa22.2■■□□□ 1.14
GINS3-203ENST00000426538 ANKRD50Q9ULJ7 1429 aa22.19■■□□□ 1.14
GINS3-203ENST00000426538 KDM6BO15054 1643 aa22.18■■□□□ 1.14
GINS3-203ENST00000426538 MYT1LQ9UL68 1186 aa22.17■■□□□ 1.14
GINS3-203ENST00000426538 RTEL1-TNFRSF6BF6WH68 1400 aa22.15■■□□□ 1.14
GINS3-203ENST00000426538 ZNF518AQ6AHZ1 1483 aa22.13■■□□□ 1.13
GINS3-203ENST00000426538 PLXNC1O60486 1568 aa22.13■■□□□ 1.13
GINS3-203ENST00000426538 TEX14Q8IWB6 1497 aa22.1■■□□□ 1.13
GINS3-203ENST00000426538 MPHOSPH9Q99550 1183 aa22.09■■□□□ 1.13
GINS3-203ENST00000426538 POGZQ7Z3K3 1410 aa22.09■■□□□ 1.13
GINS3-203ENST00000426538 DENND4BO75064 1496 aaPredicted RBP22.09■■□□□ 1.13
GINS3-203ENST00000426538 DUOX2Q9NRD8 1548 aa22.09■■□□□ 1.13
GINS3-203ENST00000426538 TSPOAP1O95153 1857 aa22.08■■□□□ 1.13
GINS3-203ENST00000426538 ATP7AQ04656 1500 aa22.07■■□□□ 1.12
GINS3-203ENST00000426538 ZFYVE16Q7Z3T8 1539 aa22.07■■□□□ 1.12
GINS3-203ENST00000426538 KIF13AQ9H1H9 1805 aa22.07■■□□□ 1.12
GINS3-203ENST00000426538 SLC4A1APQ9BWU0 796 aaKnown RBP22.06■■□□□ 1.12
GINS3-203ENST00000426538 RAPGEF3O95398 923 aa22.06■■□□□ 1.12
GINS3-203ENST00000426538 INO80Q9ULG1 1556 aaPredicted RBP22.04■■□□□ 1.12
GINS3-203ENST00000426538 ERBINQ96RT1 1412 aa22.04■■□□□ 1.12
GINS3-203ENST00000426538 NUP155O75694 1391 aa22.03■■□□□ 1.12
GINS3-203ENST00000426538 KDM5CP41229 1560 aa22.02■■□□□ 1.12
GINS3-203ENST00000426538 PPRC1Q5VV67 1664 aaKnown RBP22.02■■□□□ 1.11
GINS3-203ENST00000426538 MLH3Q9UHC1 1453 aa22.01■■□□□ 1.11
GINS3-203ENST00000426538 KIDINS220Q9ULH0 1771 aa21.99■■□□□ 1.11
GINS3-203ENST00000426538 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
GINS3-203ENST00000426538 SIN3AQ96ST3 1273 aa21.98■■□□□ 1.11
GINS3-203ENST00000426538 HECW2Q9P2P5 1572 aa21.98■■□□□ 1.11
GINS3-203ENST00000426538 TRHP20396 242 aaPredicted RBP21.97■■□□□ 1.11
GINS3-203ENST00000426538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.97■■□□□ 1.11
GINS3-203ENST00000426538 DHX29Q7Z478 1369 aaKnown RBP21.97■■□□□ 1.11
GINS3-203ENST00000426538 PZPP20742 1482 aa21.97■■□□□ 1.11
GINS3-203ENST00000426538 RICTORQ6R327 1708 aa21.96■■□□□ 1.11
GINS3-203ENST00000426538 KDM5DQ9BY66 1539 aa21.94■■□□□ 1.1
GINS3-203ENST00000426538 PKD2Q13563 968 aa21.94■■□□□ 1.1
GINS3-203ENST00000426538 FOXD1Q16676 465 aa21.94■■□□□ 1.1
GINS3-203ENST00000426538 KIF3BO15066 747 aa21.92■■□□□ 1.1
GINS3-203ENST00000426538 UNC13BO14795 1591 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms