RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 MPHOSPH9Q99550 1183 aa10.22□□□□□ -0.77
CTNND1-207ENST00000426142 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
CTNND1-207ENST00000426142 ROCK2O75116 1388 aaKnown RBP10.22□□□□□ -0.77
CTNND1-207ENST00000426142 KIF3BO15066 747 aa10.21□□□□□ -0.77
CTNND1-207ENST00000426142 EFCAB2Q5VUJ9 269 aa10.21□□□□□ -0.77
CTNND1-207ENST00000426142 PPP4R2Q9NY27 417 aa10.21□□□□□ -0.77
CTNND1-207ENST00000426142 NAP1L2Q9ULW6 460 aaPredicted RBP10.21□□□□□ -0.78
CTNND1-207ENST00000426142 FHOD3Q2V2M9 1422 aa10.2□□□□□ -0.78
CTNND1-207ENST00000426142 HDGFL2Q7Z4V5 671 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-207ENST00000426142 RAB3GAP2Q9H2M9 1393 aa10.2□□□□□ -0.78
CTNND1-207ENST00000426142 ZRSR1Q15695 479 aaKnown RBP10.2□□□□□ -0.78
CTNND1-207ENST00000426142 GOLGA2Q08379 1002 aa10.19□□□□□ -0.78
CTNND1-207ENST00000426142 RTF1Q92541 710 aaKnown RBP10.19□□□□□ -0.78
CTNND1-207ENST00000426142 KCNJ4P48050 445 aa10.19□□□□□ -0.78
CTNND1-207ENST00000426142 FMN1Q68DA7 1419 aa10.19□□□□□ -0.78
CTNND1-207ENST00000426142 FGD1P98174 961 aa10.19□□□□□ -0.78
CTNND1-207ENST00000426142 APBB1O00213 710 aa10.18□□□□□ -0.78
CTNND1-207ENST00000426142 TRIM44Q96DX7 344 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-207ENST00000426142 CSB-PGBD3P0DP91 1061 aa10.18□□□□□ -0.78
CTNND1-207ENST00000426142 ZNF330Q9Y3S2 320 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-207ENST00000426142 KTN1Q86UP2 1357 aaKnown RBP10.17□□□□□ -0.78
CTNND1-207ENST00000426142 ANKRD30AQ9BXX3 1397 aa10.17□□□□□ -0.78
CTNND1-207ENST00000426142 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
CTNND1-207ENST00000426142 MS4A1P11836 297 aa10.17□□□□□ -0.78
CTNND1-207ENST00000426142 HSP90AB1P08238 724 aaKnown RBP10.17□□□□□ -0.78
CTNND1-207ENST00000426142 U2AF1L5P0DN76 240 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-207ENST00000426142 U2AF1Q01081 240 aaKnown RBP eCLIP10.17□□□□□ -0.782e-10■■□□□ 12.3
CTNND1-207ENST00000426142 PTMAP06454 111 aaKnown RBP10.16□□□□□ -0.78
CTNND1-207ENST00000426142 CHMP4BQ9H444 224 aaKnown RBP10.16□□□□□ -0.78
CTNND1-207ENST00000426142 NUTM2FA1L443 756 aa10.16□□□□□ -0.78
CTNND1-207ENST00000426142 CADPSQ9ULU8 1353 aa10.15□□□□□ -0.78
CTNND1-207ENST00000426142 SPRYD3Q8NCJ5 442 aa10.15□□□□□ -0.78
CTNND1-207ENST00000426142 PLCB2Q00722 1185 aa10.15□□□□□ -0.79
CTNND1-207ENST00000426142 WASHC2CQ9Y4E1 1318 aa10.14□□□□□ -0.79
CTNND1-207ENST00000426142 RAPGEF2Q9Y4G8 1499 aa10.14□□□□□ -0.79
CTNND1-207ENST00000426142 TIMELESSQ9UNS1 1208 aa10.14□□□□□ -0.79
CTNND1-207ENST00000426142 SPAG9O60271 1321 aaKnown RBP10.14□□□□□ -0.79
CTNND1-207ENST00000426142 JPH4Q96JJ6 628 aa10.13□□□□□ -0.79
CTNND1-207ENST00000426142 CCDC9Q9Y3X0 531 aaKnown RBP10.12□□□□□ -0.79
CTNND1-207ENST00000426142 ANP32EQ9BTT0 268 aa10.12□□□□□ -0.79
CTNND1-207ENST00000426142 L3MBTL2Q969R5 705 aa10.11□□□□□ -0.79
CTNND1-207ENST00000426142 CCDC146Q8IYE0 955 aa10.11□□□□□ -0.79
CTNND1-207ENST00000426142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.11□□□□□ -0.792e-8■□□□□ 11.3
CTNND1-207ENST00000426142 CCER2I3L3R5 266 aa10.11□□□□□ -0.79
CTNND1-207ENST00000426142 ITPRIPQ8IWB1 547 aa10.1□□□□□ -0.79
CTNND1-207ENST00000426142 ISY1Q9ULR0 285 aaKnown RBP10.1□□□□□ -0.79
CTNND1-207ENST00000426142 EID1Q9Y6B2 187 aa10.1□□□□□ -0.79
CTNND1-207ENST00000426142 DNTTIP2Q5QJE6 756 aaKnown RBP10.1□□□□□ -0.79
CTNND1-207ENST00000426142 LTV1Q96GA3 475 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-207ENST00000426142 PHF23Q9BUL5 403 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-207ENST00000426142 TRAK1Q9UPV9 953 aa10.09□□□□□ -0.79
CTNND1-207ENST00000426142 NGDNQ8NEJ9 315 aaKnown RBP10.09□□□□□ -0.79
CTNND1-207ENST00000426142 CCDC18Q5T9S5 1454 aa10.09□□□□□ -0.79
CTNND1-207ENST00000426142 EIF3AQ14152 1382 aaKnown RBP10.09□□□□□ -0.79
CTNND1-207ENST00000426142 NOP58Q9Y2X3 529 aaKnown RBP10.09□□□□□ -0.79
CTNND1-207ENST00000426142 ATAD2BQ9ULI0 1458 aa10.09□□□□□ -0.79
CTNND1-207ENST00000426142 CYB5RLQ6IPT4 315 aa10.08□□□□□ -0.8
CTNND1-207ENST00000426142 HSCBQ8IWL3 235 aa10.08□□□□□ -0.8
CTNND1-207ENST00000426142 RUSC2Q8N2Y8 1516 aa10.08□□□□□ -0.8
CTNND1-207ENST00000426142 RALBP1Q15311 655 aa10.08□□□□□ -0.8
CTNND1-207ENST00000426142 FANCD2Q9BXW9 1451 aa10.07□□□□□ -0.8
CTNND1-207ENST00000426142 RCAN3Q9UKA8 241 aa10.07□□□□□ -0.8
CTNND1-207ENST00000426142 IPO8O15397 1037 aaKnown RBP10.07□□□□□ -0.8
CTNND1-207ENST00000426142 TERF2IPQ9NYB0 399 aa10.06□□□□□ -0.8
CTNND1-207ENST00000426142 SMARCA4P51532 1647 aa10.06□□□□□ -0.8
CTNND1-207ENST00000426142 GLIPR1L2Q4G1C9 344 aa10.06□□□□□ -0.8
CTNND1-207ENST00000426142 CHMP3Q9Y3E7 222 aa10.06□□□□□ -0.8
CTNND1-207ENST00000426142 MCCP23508 829 aa10.06□□□□□ -0.8
CTNND1-207ENST00000426142 AMPHP49418 695 aa10.05□□□□□ -0.8
CTNND1-207ENST00000426142 GOLGA6L4A6NEF3 574 aa10.05□□□□□ -0.8
CTNND1-207ENST00000426142 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
CTNND1-207ENST00000426142 CALD1Q05682 793 aaKnown RBP10.04□□□□□ -0.8
CTNND1-207ENST00000426142 SLC4A10Q6U841 1118 aa10.04□□□□□ -0.8
CTNND1-207ENST00000426142 CLUAP1Q96AJ1 413 aa10.04□□□□□ -0.8
CTNND1-207ENST00000426142 SMC4Q9NTJ3 1288 aa10.04□□□□□ -0.8
CTNND1-207ENST00000426142 DCAF8L1A6NGE4 600 aa10.04□□□□□ -0.8
CTNND1-207ENST00000426142 RRP7AQ9Y3A4 280 aaKnown RBP10.03□□□□□ -0.8
CTNND1-207ENST00000426142 STK31Q9BXU1 1019 aa10.03□□□□□ -0.8
CTNND1-207ENST00000426142 RSPH4AQ5TD94 716 aa10.02□□□□□ -0.8
CTNND1-207ENST00000426142 PTPRGP23470 1445 aa10.02□□□□□ -0.8
CTNND1-207ENST00000426142 CLSTN1O94985 981 aa10.02□□□□□ -0.81
CTNND1-207ENST00000426142 ST20-MTHFSA0A0A6YYL1 179 aa10.02□□□□□ -0.81
CTNND1-207ENST00000426142 KIAA1211Q6ZU35 1233 aa10.02□□□□□ -0.81
CTNND1-207ENST00000426142 GNL2Q13823 731 aaKnown RBP10.01□□□□□ -0.81
CTNND1-207ENST00000426142 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
CTNND1-207ENST00000426142 CCDC144AA2RUR9 1427 aa10.01□□□□□ -0.81
CTNND1-207ENST00000426142 RWDD1Q9H446 243 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-207ENST00000426142 GORABQ5T7V8 394 aa10□□□□□ -0.81
CTNND1-207ENST00000426142 PANK3Q9H999 370 aa10□□□□□ -0.81
CTNND1-207ENST00000426142 TAF7LQ5H9L4 462 aa10□□□□□ -0.81
CTNND1-207ENST00000426142 TRIM6-TRIM34B2RNG4 842 aa9.99□□□□□ -0.81
CTNND1-207ENST00000426142 RAD54L2Q9Y4B4 1467 aa9.99□□□□□ -0.81
CTNND1-207ENST00000426142 MINK1Q8N4C8 1332 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-207ENST00000426142 GOLGA6L6A8MZA4 724 aa9.99□□□□□ -0.81
CTNND1-207ENST00000426142 NAP1L5Q96NT1 182 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-207ENST00000426142 ELL2O00472 640 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-207ENST00000426142 MFAP1P55081 439 aaKnown RBP9.98□□□□□ -0.81
CTNND1-207ENST00000426142 OSCARQ8IYS5 282 aa9.98□□□□□ -0.81
CTNND1-207ENST00000426142 NLRP13Q86W25 1043 aa9.98□□□□□ -0.81
CTNND1-207ENST00000426142 SLKQ9H2G2 1235 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms