RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 MICALL2Q8IY33 904 aa9.67□□□□□ -0.86
SDCBPP2-201ENST00000424643 PPP1R37O75864 691 aa9.62□□□□□ -0.87
SDCBPP2-201ENST00000424643 NKX1-1Q15270 411 aaPredicted RBP9.62□□□□□ -0.87
SDCBPP2-201ENST00000424643 EMP3P54852 163 aa9.61□□□□□ -0.87
SDCBPP2-201ENST00000424643 TMEM92Q6UXU6 159 aa9.6□□□□□ -0.87
SDCBPP2-201ENST00000424643 PLCB2Q00722 1185 aa9.59□□□□□ -0.87
SDCBPP2-201ENST00000424643 POTEB3A0JP26 581 aa9.58□□□□□ -0.88
SDCBPP2-201ENST00000424643 POTEBQ6S5H4 581 aa9.58□□□□□ -0.88
SDCBPP2-201ENST00000424643 HS3ST6Q96QI5 342 aa9.56□□□□□ -0.88
SDCBPP2-201ENST00000424643 DNAJC5Q9H3Z4 198 aa9.56□□□□□ -0.88
SDCBPP2-201ENST00000424643 FAM205CA6NFA0 338 aa9.55□□□□□ -0.88
SDCBPP2-201ENST00000424643 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
SDCBPP2-201ENST00000424643 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
SDCBPP2-201ENST00000424643 HOXB3P14651 431 aaPredicted RBP9.5□□□□□ -0.89
SDCBPP2-201ENST00000424643 GTPBP6O43824 516 aaPredicted RBP9.49□□□□□ -0.89
SDCBPP2-201ENST00000424643 HAP1P54257 671 aaPredicted RBP9.49□□□□□ -0.89
SDCBPP2-201ENST00000424643 C2orf72A6NCS6 295 aa9.48□□□□□ -0.89
SDCBPP2-201ENST00000424643 RYDENQ9NUL5 291 aaKnown RBP9.47□□□□□ -0.89
SDCBPP2-201ENST00000424643 KIF3CO14782 793 aa9.45□□□□□ -0.9
SDCBPP2-201ENST00000424643 ZNF710Q8N1W2 664 aa9.45□□□□□ -0.9
SDCBPP2-201ENST00000424643 TMC2Q8TDI7 906 aa9.45□□□□□ -0.9
SDCBPP2-201ENST00000424643 DOK7Q18PE1 504 aa9.44□□□□□ -0.9
SDCBPP2-201ENST00000424643 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
SDCBPP2-201ENST00000424643 BBXQ8WY36 941 aaPredicted RBP9.42□□□□□ -0.9
SDCBPP2-201ENST00000424643 RIMBP2O15034 1052 aa9.39□□□□□ -0.91
SDCBPP2-201ENST00000424643 GPHNQ9NQX3 736 aaPredicted RBP9.38□□□□□ -0.91
SDCBPP2-201ENST00000424643 ERBB3P21860 1342 aa9.37□□□□□ -0.91
SDCBPP2-201ENST00000424643 ARSIQ5FYB1 569 aa9.36□□□□□ -0.91
SDCBPP2-201ENST00000424643 GPR153Q6NV75 609 aa9.36□□□□□ -0.91
SDCBPP2-201ENST00000424643 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.36□□□□□ -0.91
SDCBPP2-201ENST00000424643 DSG2Q14126 1118 aa9.35□□□□□ -0.91
SDCBPP2-201ENST00000424643 KHSRPQ92945 711 aaKnown RBP eCLIP9.35□□□□□ -0.91
SDCBPP2-201ENST00000424643 FOXK1P85037 733 aa9.34□□□□□ -0.91
SDCBPP2-201ENST00000424643 PLPP6Q8IY26 295 aa9.34□□□□□ -0.91
SDCBPP2-201ENST00000424643 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
SDCBPP2-201ENST00000424643 NCKAP5LQ9HCH0 1330 aa9.32□□□□□ -0.92
SDCBPP2-201ENST00000424643 CADPS2Q86UW7 1296 aa9.32□□□□□ -0.92
SDCBPP2-201ENST00000424643 SPRYD3Q8NCJ5 442 aa9.32□□□□□ -0.92
SDCBPP2-201ENST00000424643 CRISPLD2Q9H0B8 497 aa9.32□□□□□ -0.92
SDCBPP2-201ENST00000424643 PDE4AP27815 886 aa9.3□□□□□ -0.92
SDCBPP2-201ENST00000424643 VARS2Q5ST30 1063 aaKnown RBP9.3□□□□□ -0.92
SDCBPP2-201ENST00000424643 PAXIP1Q6ZW49 1069 aaPredicted RBP9.3□□□□□ -0.92
SDCBPP2-201ENST00000424643 VSIG10Q8N0Z9 540 aa9.3□□□□□ -0.92
SDCBPP2-201ENST00000424643 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
SDCBPP2-201ENST00000424643 CFAP44Q96MT7 982 aa9.3□□□□□ -0.92
SDCBPP2-201ENST00000424643 PCDHGA4Q9Y5G9 962 aa9.3□□□□□ -0.92
SDCBPP2-201ENST00000424643 SLC34A2O95436 690 aa9.29□□□□□ -0.92
SDCBPP2-201ENST00000424643 LARP6Q9BRS8 491 aaKnown RBP9.29□□□□□ -0.92
SDCBPP2-201ENST00000424643 NUDT7P0C024 238 aa9.28□□□□□ -0.92
SDCBPP2-201ENST00000424643 PPP1R15BQ5SWA1 713 aa9.27□□□□□ -0.93
SDCBPP2-201ENST00000424643 MYT1LQ9UL68 1186 aa9.26□□□□□ -0.93
SDCBPP2-201ENST00000424643 ZNF687Q8N1G0 1237 aa9.25□□□□□ -0.93
SDCBPP2-201ENST00000424643 PTCD2Q8WV60 388 aaKnown RBP9.24□□□□□ -0.93
SDCBPP2-201ENST00000424643 BCANQ96GW7 911 aa9.24□□□□□ -0.93
SDCBPP2-201ENST00000424643 ZNF316A6NFI3 1004 aaPredicted RBP9.23□□□□□ -0.93
SDCBPP2-201ENST00000424643 UPF1Q92900 1129 aaKnown RBP eCLIP9.23□□□□□ -0.93
SDCBPP2-201ENST00000424643 DDX27Q96GQ7 796 aaKnown RBP9.23□□□□□ -0.93
SDCBPP2-201ENST00000424643 MFSD10Q14728 455 aa9.21□□□□□ -0.94
SDCBPP2-201ENST00000424643 LHX6Q9UPM6 363 aa9.21□□□□□ -0.94
SDCBPP2-201ENST00000424643 OXER1Q8TDS5 423 aa9.2□□□□□ -0.94
SDCBPP2-201ENST00000424643 KDM2AQ9Y2K7 1162 aa9.2□□□□□ -0.94
SDCBPP2-201ENST00000424643 TBC1D12O60347 775 aa9.19□□□□□ -0.94
SDCBPP2-201ENST00000424643 KDM4FA0A1W2PPD8 638 aa9.18□□□□□ -0.94
SDCBPP2-201ENST00000424643 PTGER2P43116 358 aa9.17□□□□□ -0.94
SDCBPP2-201ENST00000424643 EMILIN3Q9NT22 766 aa9.15□□□□□ -0.94
SDCBPP2-201ENST00000424643 ANKRD13DQ6ZTN6 518 aa9.14□□□□□ -0.95
SDCBPP2-201ENST00000424643 TSHZ2Q9NRE2 1034 aa9.14□□□□□ -0.95
SDCBPP2-201ENST00000424643 MAP3K9P80192 1104 aa9.12□□□□□ -0.95
SDCBPP2-201ENST00000424643 EVI5O60447 810 aa9.1□□□□□ -0.95
SDCBPP2-201ENST00000424643 POTEEQ6S8J3 1075 aa9.1□□□□□ -0.95
SDCBPP2-201ENST00000424643 AXIN2Q9Y2T1 843 aa9.1□□□□□ -0.95
SDCBPP2-201ENST00000424643 PSDA5PKW4 1024 aaPredicted RBP9.08□□□□□ -0.96
SDCBPP2-201ENST00000424643 PRKCSHP14314 528 aaPredicted RBP9.08□□□□□ -0.96
SDCBPP2-201ENST00000424643 LSM11P83369 360 aaKnown RBP eCLIP9.08□□□□□ -0.96
SDCBPP2-201ENST00000424643 CAMK2BQ13554 666 aa9.08□□□□□ -0.96
SDCBPP2-201ENST00000424643 DPYSL4O14531 572 aa9.06□□□□□ -0.96
SDCBPP2-201ENST00000424643 ZNF454Q8N9F8 522 aa9.06□□□□□ -0.96
SDCBPP2-201ENST00000424643 ANO8Q9HCE9 1232 aaPredicted RBP9.06□□□□□ -0.96
SDCBPP2-201ENST00000424643 WDR70Q9NW82 654 aa9.06□□□□□ -0.96
SDCBPP2-201ENST00000424643 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
SDCBPP2-201ENST00000424643 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
SDCBPP2-201ENST00000424643 PBX2P40425 430 aa9.03□□□□□ -0.96
SDCBPP2-201ENST00000424643 PSEN2P49810 448 aa9.03□□□□□ -0.96
SDCBPP2-201ENST00000424643 E2F4Q16254 413 aa9.03□□□□□ -0.96
SDCBPP2-201ENST00000424643 FOSBP53539 338 aa9.02□□□□□ -0.97
SDCBPP2-201ENST00000424643 DMRTA1Q5VZB9 504 aa9□□□□□ -0.97
SDCBPP2-201ENST00000424643 KCNK17Q96T54 332 aa9□□□□□ -0.97
SDCBPP2-201ENST00000424643 JPH4Q96JJ6 628 aa8.99□□□□□ -0.97
SDCBPP2-201ENST00000424643 TPRNQ4KMQ1 711 aa8.98□□□□□ -0.97
SDCBPP2-201ENST00000424643 PCDHGA10Q9Y5H3 936 aa8.98□□□□□ -0.97
SDCBPP2-201ENST00000424643 ZDHHC16Q969W1 377 aa8.97□□□□□ -0.97
SDCBPP2-201ENST00000424643 ADAM33Q9BZ11 813 aa8.97□□□□□ -0.97
SDCBPP2-201ENST00000424643 DDX12PQ92771 950 aa8.96□□□□□ -0.98
SDCBPP2-201ENST00000424643 BCL2L12Q9HB09 334 aa8.96□□□□□ -0.98
SDCBPP2-201ENST00000424643 PLA2G2EQ9NZK7 142 aa8.95□□□□□ -0.98
SDCBPP2-201ENST00000424643 HCSTQ9UBK5 93 aa8.95□□□□□ -0.98
SDCBPP2-201ENST00000424643 PTPREP23469 700 aa8.94□□□□□ -0.98
SDCBPP2-201ENST00000424643 PDIA6Q15084 440 aa8.94□□□□□ -0.98
SDCBPP2-201ENST00000424643 ADGRD1Q6QNK2 874 aa8.94□□□□□ -0.98
SDCBPP2-201ENST00000424643 KCNH8Q96L42 1107 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms