RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 PREX2Q70Z35 1606 aa39.65■■■■□ 3.94
TSPAN3-203ENST00000424443 AKNAQ7Z591 1439 aa39.65■■■■□ 3.94
TSPAN3-203ENST00000424443 CDC42BPAQ5VT25 1732 aa39.64■■■■□ 3.94
TSPAN3-203ENST00000424443 NCOA2Q15596 1464 aa39.63■■■■□ 3.93
TSPAN3-203ENST00000424443 CDC42BPBQ9Y5S2 1711 aa39.62■■■■□ 3.93
TSPAN3-203ENST00000424443 GPATCH8Q9UKJ3 1502 aaKnown RBP39.61■■■■□ 3.93
TSPAN3-203ENST00000424443 COL17A1Q9UMD9 1497 aaPredicted RBP39.61■■■■□ 3.93
TSPAN3-203ENST00000424443 CFDP1Q9UEE9 299 aaPredicted RBP39.57■■■■□ 3.93
TSPAN3-203ENST00000424443 ADGRL1O94910 1474 aa39.55■■■■□ 3.92
TSPAN3-203ENST00000424443 ITSN2Q9NZM3 1697 aa39.55■■■■□ 3.92
TSPAN3-203ENST00000424443 ZNF777Q9ULD5 760 aaPredicted RBP39.53■■■■□ 3.92
TSPAN3-203ENST00000424443 DENND4BO75064 1496 aaPredicted RBP39.5■■■■□ 3.91
TSPAN3-203ENST00000424443 SCAPERQ9BY12 1400 aa39.49■■■■□ 3.91
TSPAN3-203ENST00000424443 RAPGEF3O95398 923 aa39.48■■■■□ 3.91
TSPAN3-203ENST00000424443 SAMD9LQ8IVG5 1584 aa39.38■■■■□ 3.9
TSPAN3-203ENST00000424443 ABCC1P33527 1531 aa39.38■■■■□ 3.89
TSPAN3-203ENST00000424443 PLEKHH2Q8IVE3 1493 aa39.37■■■■□ 3.89
TSPAN3-203ENST00000424443 RICTORQ6R327 1708 aa39.36■■■■□ 3.89
TSPAN3-203ENST00000424443 MYOM3Q5VTT5 1437 aa39.36■■■■□ 3.89
TSPAN3-203ENST00000424443 POGZQ7Z3K3 1410 aa39.36■■■■□ 3.89
TSPAN3-203ENST00000424443 FRMPD1Q5SYB0 1578 aa39.34■■■■□ 3.89
TSPAN3-203ENST00000424443 ZNF518AQ6AHZ1 1483 aa39.31■■■■□ 3.88
TSPAN3-203ENST00000424443 PPARGC1BQ86YN6 1023 aaKnown RBP39.31■■■■□ 3.88
TSPAN3-203ENST00000424443 ZNF644Q9H582 1327 aaPredicted RBP39.3■■■■□ 3.88
TSPAN3-203ENST00000424443 SYCP2Q9BX26 1530 aa39.29■■■■□ 3.88
TSPAN3-203ENST00000424443 KIAA1107Q9UPP5 1409 aa39.29■■■■□ 3.88
TSPAN3-203ENST00000424443 HNRNPMP52272 730 aaKnown RBP eCLIP39.29■■■■□ 3.88
TSPAN3-203ENST00000424443 MIA2Q96PC5 1412 aa39.28■■■■□ 3.88
TSPAN3-203ENST00000424443 ARHGEF12Q9NZN5 1544 aa39.28■■■■□ 3.88
TSPAN3-203ENST00000424443 AFAP1Q8N556 730 aa39.27■■■■□ 3.88
TSPAN3-203ENST00000424443 CAMSAP2Q08AD1 1489 aa39.25■■■■□ 3.87
TSPAN3-203ENST00000424443 MYT1LQ9UL68 1186 aa39.24■■■■□ 3.87
TSPAN3-203ENST00000424443 TRAPPC8Q9Y2L5 1435 aa39.24■■■■□ 3.87
TSPAN3-203ENST00000424443 ZMYM4Q5VZL5 1548 aa39.23■■■■□ 3.87
TSPAN3-203ENST00000424443 MAGI2Q86UL8 1455 aa39.18■■■■□ 3.86
TSPAN3-203ENST00000424443 KDM5CP41229 1560 aa39.17■■■■□ 3.86
TSPAN3-203ENST00000424443 FGD6Q6ZV73 1430 aa39.16■■■■□ 3.86
TSPAN3-203ENST00000424443 ZFYVE16Q7Z3T8 1539 aa39.14■■■■□ 3.86
TSPAN3-203ENST00000424443 RSPH4AQ5TD94 716 aa39.13■■■■□ 3.85
TSPAN3-203ENST00000424443 HECW2Q9P2P5 1572 aa39.12■■■■□ 3.85
TSPAN3-203ENST00000424443 MBD5Q9P267 1494 aa39.12■■■■□ 3.85
TSPAN3-203ENST00000424443 PTPN23Q9H3S7 1636 aa39.12■■■■□ 3.85
TSPAN3-203ENST00000424443 SPAG9O60271 1321 aaKnown RBP39.1■■■■□ 3.85
TSPAN3-203ENST00000424443 ARHGEF40Q8TER5 1519 aa39.1■■■■□ 3.85
TSPAN3-203ENST00000424443 MLH3Q9UHC1 1453 aa39.08■■■■□ 3.85
TSPAN3-203ENST00000424443 YEATS2Q9ULM3 1422 aa39.08■■■■□ 3.85
TSPAN3-203ENST00000424443 CCDC141Q6ZP82 1450 aa39.07■■■■□ 3.84
TSPAN3-203ENST00000424443 ARHGEF5Q12774 1597 aa39.04■■■■□ 3.84
TSPAN3-203ENST00000424443 TSPY4P0CV99 314 aa39.02■■■■□ 3.84
TSPAN3-203ENST00000424443 TSPY10P0CW01 314 aa39.02■■■■□ 3.84
TSPAN3-203ENST00000424443 TCOF1Q13428 1488 aaKnown RBP39.01■■■■□ 3.84
TSPAN3-203ENST00000424443 FAM50AQ14320 339 aaKnown RBP39.01■■■■□ 3.84
TSPAN3-203ENST00000424443 KIDINS220Q9ULH0 1771 aa38.98■■■■□ 3.83
TSPAN3-203ENST00000424443 ATP10AO60312 1499 aa38.98■■■■□ 3.83
TSPAN3-203ENST00000424443 ATP7AQ04656 1500 aa38.97■■■■□ 3.83
TSPAN3-203ENST00000424443 ARID4BQ4LE39 1312 aaPredicted RBP38.95■■■■□ 3.83
TSPAN3-203ENST00000424443 INO80Q9ULG1 1556 aaPredicted RBP38.94■■■■□ 3.82
TSPAN3-203ENST00000424443 DIP2CQ9Y2E4 1556 aa38.93■■■■□ 3.82
TSPAN3-203ENST00000424443 C9orf84Q5VXU9 1444 aa38.93■■■■□ 3.82
TSPAN3-203ENST00000424443 RTEL1-TNFRSF6BF6WH68 1400 aa38.92■■■■□ 3.82
TSPAN3-203ENST00000424443 ABCA6Q8N139 1617 aa38.92■■■■□ 3.82
TSPAN3-203ENST00000424443 DNMT1P26358 1616 aaKnown RBP38.85■■■■□ 3.81
TSPAN3-203ENST00000424443 DAPK1P53355 1430 aa38.85■■■■□ 3.81
TSPAN3-203ENST00000424443 ABCC5O15440 1437 aa38.84■■■■□ 3.81
TSPAN3-203ENST00000424443 MAST1Q9Y2H9 1570 aa38.81■■■■□ 3.8
TSPAN3-203ENST00000424443 REREQ9P2R6 1566 aa38.8■■■■□ 3.8
TSPAN3-203ENST00000424443 CROCC2H7BZ55 1655 aa38.8■■■■□ 3.8
TSPAN3-203ENST00000424443 SHANK2Q9UPX8 1470 aa38.79■■■■□ 3.8
TSPAN3-203ENST00000424443 ADGBQ8N7X0 1667 aa38.77■■■■□ 3.8
TSPAN3-203ENST00000424443 RRBP1Q9P2E9 1410 aaKnown RBP38.76■■■■□ 3.8
TSPAN3-203ENST00000424443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.76■■■■□ 3.8
TSPAN3-203ENST00000424443 A2MP01023 1474 aa38.76■■■■□ 3.8
TSPAN3-203ENST00000424443 SIGLEC1Q9BZZ2 1709 aa38.74■■■■□ 3.79
TSPAN3-203ENST00000424443 CHIC2Q9UKJ5 165 aa38.73■■■■□ 3.79
TSPAN3-203ENST00000424443 MLECQ14165 292 aa38.72■■■■□ 3.79
TSPAN3-203ENST00000424443 KDM4FA0A1W2PPD8 638 aa38.69■■■■□ 3.78
TSPAN3-203ENST00000424443 BCORL1Q5H9F3 1711 aa38.69■■■■□ 3.78
TSPAN3-203ENST00000424443 ITGAEP38570 1179 aa38.68■■■■□ 3.78
TSPAN3-203ENST00000424443 AGLP35573 1532 aa38.68■■■■□ 3.78
TSPAN3-203ENST00000424443 DHX29Q7Z478 1369 aaKnown RBP38.68■■■■□ 3.78
TSPAN3-203ENST00000424443 PLXNC1O60486 1568 aa38.67■■■■□ 3.78
TSPAN3-203ENST00000424443 ANKRD30AQ9BXX3 1397 aa38.65■■■■□ 3.78
TSPAN3-203ENST00000424443 RRP7BPQ9NSQ0 103 aa38.63■■■■□ 3.77
TSPAN3-203ENST00000424443 KIF15Q9NS87 1388 aa38.61■■■■□ 3.77
TSPAN3-203ENST00000424443 ADAMTSL3P82987 1691 aa38.58■■■■□ 3.77
TSPAN3-203ENST00000424443 DUOX2Q9NRD8 1548 aa38.57■■■■□ 3.77
TSPAN3-203ENST00000424443 ADGRL2O95490 1459 aa38.56■■■■□ 3.76
TSPAN3-203ENST00000424443 PTPRKQ15262 1439 aa38.55■■■■□ 3.76
TSPAN3-203ENST00000424443 NCOA1Q15788 1441 aa38.55■■■■□ 3.76
TSPAN3-203ENST00000424443 KIF3BO15066 747 aa38.54■■■■□ 3.76
TSPAN3-203ENST00000424443 GGT6Q6P531 493 aa38.53■■■■□ 3.76
TSPAN3-203ENST00000424443 AEBP2Q6ZN18 517 aaPredicted RBP38.53■■■■□ 3.76
TSPAN3-203ENST00000424443 ESF1Q9H501 851 aaKnown RBP38.53■■■■□ 3.76
TSPAN3-203ENST00000424443 MADDQ8WXG6 1647 aa38.52■■■■□ 3.76
TSPAN3-203ENST00000424443 FER1L4A9Z1Z3 1794 aa38.48■■■■□ 3.75
TSPAN3-203ENST00000424443 ROCK1Q13464 1354 aa38.48■■■■□ 3.75
TSPAN3-203ENST00000424443 ERBINQ96RT1 1412 aa38.46■■■■□ 3.75
TSPAN3-203ENST00000424443 EIF2AK4Q9P2K8 1649 aaKnown RBP38.45■■■■□ 3.75
TSPAN3-203ENST00000424443 RIMS1Q86UR5 1692 aaKnown RBP38.44■■■■□ 3.74
TSPAN3-203ENST00000424443 PPP6R1Q9UPN7 881 aa38.4■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms