RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 POGZQ7Z3K3 1410 aa31.48■■■□□ 2.63
FBXO28-202ENST00000424254 ZMYM4Q5VZL5 1548 aa31.44■■■□□ 2.62
FBXO28-202ENST00000424254 ARHGEF40Q8TER5 1519 aa31.42■■■□□ 2.62
FBXO28-202ENST00000424254 MTUS2Q5JR59 1369 aa31.41■■■□□ 2.62
FBXO28-202ENST00000424254 YEATS2Q9ULM3 1422 aa31.4■■■□□ 2.62
FBXO28-202ENST00000424254 PREX2Q70Z35 1606 aa31.39■■■□□ 2.62
FBXO28-202ENST00000424254 MAGI2Q86UL8 1455 aa31.38■■■□□ 2.61
FBXO28-202ENST00000424254 CDC42BPBQ9Y5S2 1711 aa31.37■■■□□ 2.61
FBXO28-202ENST00000424254 ZFYVE16Q7Z3T8 1539 aa31.36■■■□□ 2.61
FBXO28-202ENST00000424254 VPS8Q8N3P4 1428 aa31.36■■■□□ 2.61
FBXO28-202ENST00000424254 GPATCH8Q9UKJ3 1502 aaKnown RBP31.35■■■□□ 2.61
FBXO28-202ENST00000424254 AFAP1Q8N556 730 aa31.34■■■□□ 2.61
FBXO28-202ENST00000424254 ZNF518AQ6AHZ1 1483 aa31.33■■■□□ 2.61
FBXO28-202ENST00000424254 ARID4BQ4LE39 1312 aaPredicted RBP31.33■■■□□ 2.61
FBXO28-202ENST00000424254 ARHGEF12Q9NZN5 1544 aa31.31■■■□□ 2.6
FBXO28-202ENST00000424254 ABCC1P33527 1531 aa31.3■■■□□ 2.6
FBXO28-202ENST00000424254 EHBP1L1Q8N3D4 1523 aa31.3■■■□□ 2.6
FBXO28-202ENST00000424254 CDC42BPAQ5VT25 1732 aa31.3■■■□□ 2.6
FBXO28-202ENST00000424254 CCNB3Q8WWL7 1395 aa31.29■■■□□ 2.6
FBXO28-202ENST00000424254 TRAPPC8Q9Y2L5 1435 aa31.28■■■□□ 2.6
FBXO28-202ENST00000424254 ZNF777Q9ULD5 760 aaPredicted RBP31.27■■■□□ 2.6
FBXO28-202ENST00000424254 KDM5CP41229 1560 aa31.27■■■□□ 2.6
FBXO28-202ENST00000424254 CFDP1Q9UEE9 299 aaPredicted RBP31.24■■■□□ 2.59
FBXO28-202ENST00000424254 ADAMTSL3P82987 1691 aa31.23■■■□□ 2.59
FBXO28-202ENST00000424254 TIAM1Q13009 1591 aa31.22■■■□□ 2.59
FBXO28-202ENST00000424254 SAMD9LQ8IVG5 1584 aa31.22■■■□□ 2.59
FBXO28-202ENST00000424254 ATP10AO60312 1499 aa31.22■■■□□ 2.59
FBXO28-202ENST00000424254 BCORL1Q5H9F3 1711 aa31.21■■■□□ 2.59
FBXO28-202ENST00000424254 SIGLEC1Q9BZZ2 1709 aa31.19■■■□□ 2.58
FBXO28-202ENST00000424254 C9orf84Q5VXU9 1444 aa31.18■■■□□ 2.58
FBXO28-202ENST00000424254 ITSN2Q9NZM3 1697 aa31.18■■■□□ 2.58
FBXO28-202ENST00000424254 MYT1LQ9UL68 1186 aa31.18■■■□□ 2.58
FBXO28-202ENST00000424254 MLH3Q9UHC1 1453 aa31.18■■■□□ 2.58
FBXO28-202ENST00000424254 SYCP2Q9BX26 1530 aa31.17■■■□□ 2.58
FBXO28-202ENST00000424254 HECW2Q9P2P5 1572 aa31.17■■■□□ 2.58
FBXO28-202ENST00000424254 HNRNPMP52272 730 aaKnown RBP eCLIP31.16■■■□□ 2.58
FBXO28-202ENST00000424254 PTPRMP28827 1452 aa31.15■■■□□ 2.58
FBXO28-202ENST00000424254 NCOA2Q15596 1464 aa31.14■■■□□ 2.58
FBXO28-202ENST00000424254 KIAA1107Q9UPP5 1409 aa31.14■■■□□ 2.58
FBXO28-202ENST00000424254 MADDQ8WXG6 1647 aa31.13■■■□□ 2.57
FBXO28-202ENST00000424254 LRRC9Q6ZRR7 1453 aa31.13■■■□□ 2.57
FBXO28-202ENST00000424254 PLEKHH2Q8IVE3 1493 aa31.12■■■□□ 2.57
FBXO28-202ENST00000424254 DIP2CQ9Y2E4 1556 aa31.11■■■□□ 2.57
FBXO28-202ENST00000424254 ZNF644Q9H582 1327 aaPredicted RBP31.11■■■□□ 2.57
FBXO28-202ENST00000424254 MLECQ14165 292 aa31.11■■■□□ 2.57
FBXO28-202ENST00000424254 KANK4Q5T7N3 995 aaPredicted RBP31.09■■■□□ 2.57
FBXO28-202ENST00000424254 MAP3K1Q13233 1512 aa31.09■■■□□ 2.57
FBXO28-202ENST00000424254 ABCA6Q8N139 1617 aa31.08■■■□□ 2.57
FBXO28-202ENST00000424254 SUPT6HQ7KZ85 1726 aaKnown RBP31.07■■■□□ 2.56
FBXO28-202ENST00000424254 SPAG9O60271 1321 aaKnown RBP31.05■■■□□ 2.56
FBXO28-202ENST00000424254 REREQ9P2R6 1566 aa31.03■■■□□ 2.56
FBXO28-202ENST00000424254 KIDINS220Q9ULH0 1771 aa31.02■■■□□ 2.56
FBXO28-202ENST00000424254 MBD5Q9P267 1494 aa31.01■■■□□ 2.55
FBXO28-202ENST00000424254 RIMS1Q86UR5 1692 aaKnown RBP31■■■□□ 2.55
FBXO28-202ENST00000424254 ATP7AQ04656 1500 aa30.96■■■□□ 2.55
FBXO28-202ENST00000424254 CAMSAP2Q08AD1 1489 aa30.95■■■□□ 2.55
FBXO28-202ENST00000424254 AGLP35573 1532 aa30.95■■■□□ 2.55
FBXO28-202ENST00000424254 APLP2Q06481 763 aa30.94■■■□□ 2.54
FBXO28-202ENST00000424254 INO80Q9ULG1 1556 aaPredicted RBP30.93■■■□□ 2.54
FBXO28-202ENST00000424254 PLPPR3Q6T4P5 718 aa30.92■■■□□ 2.54
FBXO28-202ENST00000424254 FER1L4A9Z1Z3 1794 aa30.88■■■□□ 2.53
FBXO28-202ENST00000424254 CCDC141Q6ZP82 1450 aa30.87■■■□□ 2.53
FBXO28-202ENST00000424254 MYOM3Q5VTT5 1437 aa30.86■■■□□ 2.53
FBXO28-202ENST00000424254 A2MP01023 1474 aa30.85■■■□□ 2.53
FBXO28-202ENST00000424254 RTEL1-TNFRSF6BF6WH68 1400 aa30.84■■■□□ 2.53
FBXO28-202ENST00000424254 RSPH4AQ5TD94 716 aa30.83■■■□□ 2.53
FBXO28-202ENST00000424254 PLXNC1O60486 1568 aa30.82■■■□□ 2.52
FBXO28-202ENST00000424254 MIA2Q96PC5 1412 aa30.81■■■□□ 2.52
FBXO28-202ENST00000424254 CEBPAP49715 358 aaPredicted RBP30.81■■■□□ 2.52
FBXO28-202ENST00000424254 LMTK3Q96Q04 1460 aa30.78■■■□□ 2.52
FBXO28-202ENST00000424254 ARHGEF5Q12774 1597 aa30.78■■■□□ 2.52
FBXO28-202ENST00000424254 ESF1Q9H501 851 aaKnown RBP30.74■■■□□ 2.51
FBXO28-202ENST00000424254 TSPY4P0CV99 314 aa30.73■■■□□ 2.51
FBXO28-202ENST00000424254 TSPY10P0CW01 314 aa30.73■■■□□ 2.51
FBXO28-202ENST00000424254 DHX29Q7Z478 1369 aaKnown RBP30.72■■■□□ 2.51
FBXO28-202ENST00000424254 ADGBQ8N7X0 1667 aa30.71■■■□□ 2.51
FBXO28-202ENST00000424254 CNTLNQ9NXG0 1405 aa30.7■■■□□ 2.51
FBXO28-202ENST00000424254 GGT6Q6P531 493 aa30.69■■■□□ 2.5
FBXO28-202ENST00000424254 HSPA2P54652 639 aa30.66■■■□□ 2.5
FBXO28-202ENST00000424254 FGD6Q6ZV73 1430 aa30.65■■■□□ 2.5
FBXO28-202ENST00000424254 MAST1Q9Y2H9 1570 aa30.62■■■□□ 2.49
FBXO28-202ENST00000424254 PTPN23Q9H3S7 1636 aa30.62■■■□□ 2.49
FBXO28-202ENST00000424254 C3P01024 1663 aa30.61■■■□□ 2.49
FBXO28-202ENST00000424254 KIF3BO15066 747 aa30.61■■■□□ 2.49
FBXO28-202ENST00000424254 ZMYM3Q14202 1370 aa30.61■■■□□ 2.49
FBXO28-202ENST00000424254 TCOF1Q13428 1488 aaKnown RBP30.59■■■□□ 2.49
FBXO28-202ENST00000424254 ABCC5O15440 1437 aa30.58■■■□□ 2.49
FBXO28-202ENST00000424254 PPP6R1Q9UPN7 881 aa30.58■■■□□ 2.49
FBXO28-202ENST00000424254 UHRF1BP1Q6BDS2 1440 aa30.55■■■□□ 2.48
FBXO28-202ENST00000424254 MROH2AA6NES4 1674 aa30.54■■■□□ 2.48
FBXO28-202ENST00000424254 PREX1Q8TCU6 1659 aa30.54■■■□□ 2.48
FBXO28-202ENST00000424254 CLTCQ00610 1675 aaKnown RBP30.53■■■□□ 2.48
FBXO28-202ENST00000424254 DAPK1P53355 1430 aa30.52■■■□□ 2.48
FBXO28-202ENST00000424254 SHANK2Q9UPX8 1470 aa30.52■■■□□ 2.48
FBXO28-202ENST00000424254 NPATQ14207 1427 aa30.5■■■□□ 2.47
FBXO28-202ENST00000424254 DNMT1P26358 1616 aaKnown RBP30.47■■■□□ 2.47
FBXO28-202ENST00000424254 PTPRKQ15262 1439 aa30.47■■■□□ 2.47
FBXO28-202ENST00000424254 KIF15Q9NS87 1388 aa30.45■■■□□ 2.47
FBXO28-202ENST00000424254 CROCC2H7BZ55 1655 aa30.44■■■□□ 2.46
FBXO28-202ENST00000424254 RRP7BPQ9NSQ0 103 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms