RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 EFCAB2Q5VUJ9 269 aa29.11■■■□□ 2.25
HDAC6-205ENST00000423941 KANK4Q5T7N3 995 aaPredicted RBP29.09■■■□□ 2.25
HDAC6-205ENST00000423941 SUPT6HQ7KZ85 1726 aaKnown RBP29.08■■■□□ 2.25
HDAC6-205ENST00000423941 ARHGAP5Q13017 1502 aa29.06■■■□□ 2.24
HDAC6-205ENST00000423941 NCOA2Q15596 1464 aa29.04■■■□□ 2.24
HDAC6-205ENST00000423941 FRMPD1Q5SYB0 1578 aa29.03■■■□□ 2.24
HDAC6-205ENST00000423941 RICTORQ6R327 1708 aa29.03■■■□□ 2.24
HDAC6-205ENST00000423941 CCNB3Q8WWL7 1395 aa29.02■■■□□ 2.24
HDAC6-205ENST00000423941 DENND4BO75064 1496 aaPredicted RBP29.02■■■□□ 2.24
HDAC6-205ENST00000423941 APLP2Q06481 763 aa29.01■■■□□ 2.23
HDAC6-205ENST00000423941 ADGRL1O94910 1474 aa29.01■■■□□ 2.23
HDAC6-205ENST00000423941 RAPGEF3O95398 923 aa28.99■■■□□ 2.23
HDAC6-205ENST00000423941 SCAPERQ9BY12 1400 aa28.99■■■□□ 2.23
HDAC6-205ENST00000423941 ITSN2Q9NZM3 1697 aa28.98■■■□□ 2.23
HDAC6-205ENST00000423941 SAMD9LQ8IVG5 1584 aa28.94■■■□□ 2.22
HDAC6-205ENST00000423941 CFDP1Q9UEE9 299 aaPredicted RBP28.94■■■□□ 2.22
HDAC6-205ENST00000423941 ABCC1P33527 1531 aa28.94■■■□□ 2.22
HDAC6-205ENST00000423941 ARHGEF12Q9NZN5 1544 aa28.93■■■□□ 2.22
HDAC6-205ENST00000423941 POGZQ7Z3K3 1410 aa28.93■■■□□ 2.22
HDAC6-205ENST00000423941 ZMYM4Q5VZL5 1548 aa28.92■■■□□ 2.22
HDAC6-205ENST00000423941 KIAA1107Q9UPP5 1409 aa28.9■■■□□ 2.22
HDAC6-205ENST00000423941 PLEKHH2Q8IVE3 1493 aa28.87■■■□□ 2.21
HDAC6-205ENST00000423941 KDM5CP41229 1560 aa28.87■■■□□ 2.21
HDAC6-205ENST00000423941 ZNF518AQ6AHZ1 1483 aa28.86■■■□□ 2.21
HDAC6-205ENST00000423941 MAGI2Q86UL8 1455 aa28.85■■■□□ 2.21
HDAC6-205ENST00000423941 TRAPPC8Q9Y2L5 1435 aa28.85■■■□□ 2.21
HDAC6-205ENST00000423941 ZNF777Q9ULD5 760 aaPredicted RBP28.84■■■□□ 2.21
HDAC6-205ENST00000423941 AFAP1Q8N556 730 aa28.83■■■□□ 2.21
HDAC6-205ENST00000423941 ZNF644Q9H582 1327 aaPredicted RBP28.83■■■□□ 2.21
HDAC6-205ENST00000423941 MYOM3Q5VTT5 1437 aa28.83■■■□□ 2.21
HDAC6-205ENST00000423941 MIA2Q96PC5 1412 aa28.82■■■□□ 2.2
HDAC6-205ENST00000423941 SYCP2Q9BX26 1530 aa28.81■■■□□ 2.2
HDAC6-205ENST00000423941 MBD5Q9P267 1494 aa28.8■■■□□ 2.2
HDAC6-205ENST00000423941 HNRNPMP52272 730 aaKnown RBP eCLIP28.78■■■□□ 2.2
HDAC6-205ENST00000423941 MLH3Q9UHC1 1453 aa28.78■■■□□ 2.2
HDAC6-205ENST00000423941 ARHGEF40Q8TER5 1519 aa28.77■■■□□ 2.2
HDAC6-205ENST00000423941 CAMSAP2Q08AD1 1489 aa28.75■■■□□ 2.19
HDAC6-205ENST00000423941 YEATS2Q9ULM3 1422 aa28.75■■■□□ 2.19
HDAC6-205ENST00000423941 ZFYVE16Q7Z3T8 1539 aa28.74■■■□□ 2.19
HDAC6-205ENST00000423941 HECW2Q9P2P5 1572 aa28.73■■■□□ 2.19
HDAC6-205ENST00000423941 KIDINS220Q9ULH0 1771 aa28.71■■■□□ 2.19
HDAC6-205ENST00000423941 RSPH4AQ5TD94 716 aa28.7■■■□□ 2.18
HDAC6-205ENST00000423941 ARHGEF5Q12774 1597 aa28.7■■■□□ 2.18
HDAC6-205ENST00000423941 FGD6Q6ZV73 1430 aa28.69■■■□□ 2.18
HDAC6-205ENST00000423941 ATP10AO60312 1499 aa28.66■■■□□ 2.18
HDAC6-205ENST00000423941 TCOF1Q13428 1488 aaKnown RBP28.66■■■□□ 2.18
HDAC6-205ENST00000423941 PTPN23Q9H3S7 1636 aa28.65■■■□□ 2.18
HDAC6-205ENST00000423941 INO80Q9ULG1 1556 aaPredicted RBP28.65■■■□□ 2.18
HDAC6-205ENST00000423941 DIP2CQ9Y2E4 1556 aa28.64■■■□□ 2.18
HDAC6-205ENST00000423941 SPAG9O60271 1321 aaKnown RBP28.64■■■□□ 2.17
HDAC6-205ENST00000423941 SIGLEC1Q9BZZ2 1709 aa28.63■■■□□ 2.17
HDAC6-205ENST00000423941 ABCA6Q8N139 1617 aa28.63■■■□□ 2.17
HDAC6-205ENST00000423941 CCDC141Q6ZP82 1450 aa28.63■■■□□ 2.17
HDAC6-205ENST00000423941 REREQ9P2R6 1566 aa28.62■■■□□ 2.17
HDAC6-205ENST00000423941 RTEL1-TNFRSF6BF6WH68 1400 aa28.62■■■□□ 2.17
HDAC6-205ENST00000423941 ATP7AQ04656 1500 aa28.61■■■□□ 2.17
HDAC6-205ENST00000423941 KDM4FA0A1W2PPD8 638 aa28.6■■■□□ 2.17
HDAC6-205ENST00000423941 C9orf84Q5VXU9 1444 aa28.6■■■□□ 2.17
HDAC6-205ENST00000423941 PPARGC1BQ86YN6 1023 aaKnown RBP28.56■■■□□ 2.16
HDAC6-205ENST00000423941 MAST1Q9Y2H9 1570 aa28.54■■■□□ 2.16
HDAC6-205ENST00000423941 BCORL1Q5H9F3 1711 aa28.53■■■□□ 2.16
HDAC6-205ENST00000423941 MYT1LQ9UL68 1186 aa28.52■■■□□ 2.16
HDAC6-205ENST00000423941 AGLP35573 1532 aa28.52■■■□□ 2.16
HDAC6-205ENST00000423941 ADAMTSL3P82987 1691 aa28.51■■■□□ 2.16
HDAC6-205ENST00000423941 DNMT1P26358 1616 aaKnown RBP28.51■■■□□ 2.15
HDAC6-205ENST00000423941 ABCC5O15440 1437 aa28.51■■■□□ 2.15
HDAC6-205ENST00000423941 TSPY4P0CV99 314 aa28.5■■■□□ 2.15
HDAC6-205ENST00000423941 TSPY10P0CW01 314 aa28.5■■■□□ 2.15
HDAC6-205ENST00000423941 ADGBQ8N7X0 1667 aa28.49■■■□□ 2.15
HDAC6-205ENST00000423941 CROCC2H7BZ55 1655 aa28.48■■■□□ 2.15
HDAC6-205ENST00000423941 PLXNC1O60486 1568 aa28.48■■■□□ 2.15
HDAC6-205ENST00000423941 SHANK2Q9UPX8 1470 aa28.46■■■□□ 2.15
HDAC6-205ENST00000423941 DAPK1P53355 1430 aa28.46■■■□□ 2.15
HDAC6-205ENST00000423941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.46■■■□□ 2.15
HDAC6-205ENST00000423941 A2MP01023 1474 aa28.46■■■□□ 2.15
HDAC6-205ENST00000423941 ARID4BQ4LE39 1312 aaPredicted RBP28.45■■■□□ 2.15
HDAC6-205ENST00000423941 DHX29Q7Z478 1369 aaKnown RBP28.41■■■□□ 2.14
HDAC6-205ENST00000423941 RRBP1Q9P2E9 1410 aaKnown RBP28.41■■■□□ 2.14
HDAC6-205ENST00000423941 FAM50AQ14320 339 aaKnown RBP28.38■■■□□ 2.13
HDAC6-205ENST00000423941 MADDQ8WXG6 1647 aa28.36■■■□□ 2.13
HDAC6-205ENST00000423941 ADGRL2O95490 1459 aa28.34■■■□□ 2.13
HDAC6-205ENST00000423941 PTPRKQ15262 1439 aa28.32■■■□□ 2.12
HDAC6-205ENST00000423941 NCOA1Q15788 1441 aa28.31■■■□□ 2.12
HDAC6-205ENST00000423941 MLECQ14165 292 aa28.3■■■□□ 2.12
HDAC6-205ENST00000423941 FER1L4A9Z1Z3 1794 aa28.29■■■□□ 2.12
HDAC6-205ENST00000423941 DUOX2Q9NRD8 1548 aa28.28■■■□□ 2.12
HDAC6-205ENST00000423941 PTPRMP28827 1452 aa28.27■■■□□ 2.12
HDAC6-205ENST00000423941 ANKRD30AQ9BXX3 1397 aa28.27■■■□□ 2.12
HDAC6-205ENST00000423941 KIF15Q9NS87 1388 aa28.26■■■□□ 2.12
HDAC6-205ENST00000423941 RIMS1Q86UR5 1692 aaKnown RBP28.26■■■□□ 2.12
HDAC6-205ENST00000423941 EIF2AK4Q9P2K8 1649 aaKnown RBP28.25■■■□□ 2.11
HDAC6-205ENST00000423941 CHIC2Q9UKJ5 165 aa28.25■■■□□ 2.11
HDAC6-205ENST00000423941 PPP6R1Q9UPN7 881 aa28.25■■■□□ 2.11
HDAC6-205ENST00000423941 AEBP2Q6ZN18 517 aaPredicted RBP28.24■■■□□ 2.11
HDAC6-205ENST00000423941 RRP7BPQ9NSQ0 103 aa28.24■■■□□ 2.11
HDAC6-205ENST00000423941 KIF3BO15066 747 aa28.22■■■□□ 2.11
HDAC6-205ENST00000423941 ROCK1Q13464 1354 aa28.22■■■□□ 2.11
HDAC6-205ENST00000423941 ERBINQ96RT1 1412 aa28.2■■■□□ 2.11
HDAC6-205ENST00000423941 RNF17Q9BXT8 1623 aaKnown RBP28.2■■■□□ 2.1
HDAC6-205ENST00000423941 GGT6Q6P531 493 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms