RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 ARHGAP5Q13017 1502 aa34.02■■■■□ 3.04
SEC22C-207ENST00000423701 PHLDB1Q86UU1 1377 aa34.02■■■■□ 3.04
SEC22C-207ENST00000423701 NCOA2Q15596 1464 aa34.01■■■■□ 3.03
SEC22C-207ENST00000423701 GPATCH8Q9UKJ3 1502 aaKnown RBP34■■■■□ 3.03
SEC22C-207ENST00000423701 AKNAQ7Z591 1439 aa33.98■■■■□ 3.03
SEC22C-207ENST00000423701 CCNB3Q8WWL7 1395 aa33.97■■■■□ 3.03
SEC22C-207ENST00000423701 EFCAB2Q5VUJ9 269 aa33.95■■■■□ 3.02
SEC22C-207ENST00000423701 ITSN2Q9NZM3 1697 aa33.93■■■■□ 3.02
SEC22C-207ENST00000423701 ADGRL1O94910 1474 aa33.9■■■■□ 3.02
SEC22C-207ENST00000423701 FRMPD1Q5SYB0 1578 aa33.86■■■■□ 3.01
SEC22C-207ENST00000423701 DENND4BO75064 1496 aaPredicted RBP33.85■■■■□ 3.01
SEC22C-207ENST00000423701 SAMD9LQ8IVG5 1584 aa33.85■■■■□ 3.01
SEC22C-207ENST00000423701 ABCC1P33527 1531 aa33.84■■■■□ 3.01
SEC22C-207ENST00000423701 CFDP1Q9UEE9 299 aaPredicted RBP33.83■■■■□ 3.01
SEC22C-207ENST00000423701 RICTORQ6R327 1708 aa33.83■■■■□ 3.01
SEC22C-207ENST00000423701 SCAPERQ9BY12 1400 aa33.83■■■■□ 3.01
SEC22C-207ENST00000423701 RAPGEF3O95398 923 aa33.82■■■■□ 3
SEC22C-207ENST00000423701 POGZQ7Z3K3 1410 aa33.78■■■■□ 3
SEC22C-207ENST00000423701 ZNF777Q9ULD5 760 aaPredicted RBP33.78■■■■□ 3
SEC22C-207ENST00000423701 ARHGEF12Q9NZN5 1544 aa33.76■■■■□ 3
SEC22C-207ENST00000423701 MYOM3Q5VTT5 1437 aa33.75■■■□□ 2.99
SEC22C-207ENST00000423701 SYCP2Q9BX26 1530 aa33.74■■■□□ 2.99
SEC22C-207ENST00000423701 ZMYM4Q5VZL5 1548 aa33.71■■■□□ 2.99
SEC22C-207ENST00000423701 PLEKHH2Q8IVE3 1493 aa33.71■■■□□ 2.99
SEC22C-207ENST00000423701 ZNF518AQ6AHZ1 1483 aa33.71■■■□□ 2.99
SEC22C-207ENST00000423701 ZNF644Q9H582 1327 aaPredicted RBP33.7■■■□□ 2.98
SEC22C-207ENST00000423701 KIAA1107Q9UPP5 1409 aa33.69■■■□□ 2.98
SEC22C-207ENST00000423701 CAMSAP2Q08AD1 1489 aa33.68■■■□□ 2.98
SEC22C-207ENST00000423701 MIA2Q96PC5 1412 aa33.67■■■□□ 2.98
SEC22C-207ENST00000423701 TRAPPC8Q9Y2L5 1435 aa33.67■■■□□ 2.98
SEC22C-207ENST00000423701 KDM5CP41229 1560 aa33.67■■■□□ 2.98
SEC22C-207ENST00000423701 PPARGC1BQ86YN6 1023 aaKnown RBP33.63■■■□□ 2.97
SEC22C-207ENST00000423701 AFAP1Q8N556 730 aa33.63■■■□□ 2.97
SEC22C-207ENST00000423701 HNRNPMP52272 730 aaKnown RBP eCLIP33.62■■■□□ 2.97
SEC22C-207ENST00000423701 ARHGEF40Q8TER5 1519 aa33.61■■■□□ 2.97
SEC22C-207ENST00000423701 MBD5Q9P267 1494 aa33.6■■■□□ 2.97
SEC22C-207ENST00000423701 FGD6Q6ZV73 1430 aa33.6■■■□□ 2.97
SEC22C-207ENST00000423701 MAGI2Q86UL8 1455 aa33.59■■■□□ 2.97
SEC22C-207ENST00000423701 HECW2Q9P2P5 1572 aa33.58■■■□□ 2.97
SEC22C-207ENST00000423701 ZFYVE16Q7Z3T8 1539 aa33.58■■■□□ 2.97
SEC22C-207ENST00000423701 PTPN23Q9H3S7 1636 aa33.57■■■□□ 2.96
SEC22C-207ENST00000423701 YEATS2Q9ULM3 1422 aa33.54■■■□□ 2.96
SEC22C-207ENST00000423701 MLH3Q9UHC1 1453 aa33.53■■■□□ 2.96
SEC22C-207ENST00000423701 ARHGEF5Q12774 1597 aa33.52■■■□□ 2.96
SEC22C-207ENST00000423701 TCOF1Q13428 1488 aaKnown RBP33.51■■■□□ 2.96
SEC22C-207ENST00000423701 CCDC141Q6ZP82 1450 aa33.5■■■□□ 2.95
SEC22C-207ENST00000423701 KIDINS220Q9ULH0 1771 aa33.49■■■□□ 2.95
SEC22C-207ENST00000423701 INO80Q9ULG1 1556 aaPredicted RBP33.48■■■□□ 2.95
SEC22C-207ENST00000423701 ABCA6Q8N139 1617 aa33.46■■■□□ 2.95
SEC22C-207ENST00000423701 SPAG9O60271 1321 aaKnown RBP33.45■■■□□ 2.95
SEC22C-207ENST00000423701 DIP2CQ9Y2E4 1556 aa33.45■■■□□ 2.95
SEC22C-207ENST00000423701 ATP7AQ04656 1500 aa33.45■■■□□ 2.94
SEC22C-207ENST00000423701 MYT1LQ9UL68 1186 aa33.44■■■□□ 2.94
SEC22C-207ENST00000423701 RSPH4AQ5TD94 716 aa33.43■■■□□ 2.94
SEC22C-207ENST00000423701 ATP10AO60312 1499 aa33.4■■■□□ 2.94
SEC22C-207ENST00000423701 SIGLEC1Q9BZZ2 1709 aa33.38■■■□□ 2.93
SEC22C-207ENST00000423701 DNMT1P26358 1616 aaKnown RBP33.38■■■□□ 2.93
SEC22C-207ENST00000423701 C9orf84Q5VXU9 1444 aa33.37■■■□□ 2.93
SEC22C-207ENST00000423701 CROCC2H7BZ55 1655 aa33.36■■■□□ 2.93
SEC22C-207ENST00000423701 RTEL1-TNFRSF6BF6WH68 1400 aa33.36■■■□□ 2.93
SEC22C-207ENST00000423701 MAST1Q9Y2H9 1570 aa33.34■■■□□ 2.93
SEC22C-207ENST00000423701 REREQ9P2R6 1566 aa33.34■■■□□ 2.93
SEC22C-207ENST00000423701 ABCC5O15440 1437 aa33.33■■■□□ 2.93
SEC22C-207ENST00000423701 FAM50AQ14320 339 aaKnown RBP33.33■■■□□ 2.93
SEC22C-207ENST00000423701 DAPK1P53355 1430 aa33.33■■■□□ 2.93
SEC22C-207ENST00000423701 TSPY4P0CV99 314 aa33.31■■■□□ 2.92
SEC22C-207ENST00000423701 TSPY10P0CW01 314 aa33.31■■■□□ 2.92
SEC22C-207ENST00000423701 SHANK2Q9UPX8 1470 aa33.3■■■□□ 2.92
SEC22C-207ENST00000423701 ADGBQ8N7X0 1667 aa33.27■■■□□ 2.92
SEC22C-207ENST00000423701 RRBP1Q9P2E9 1410 aaKnown RBP33.27■■■□□ 2.92
SEC22C-207ENST00000423701 ARID4BQ4LE39 1312 aaPredicted RBP33.25■■■□□ 2.91
SEC22C-207ENST00000423701 PLXNC1O60486 1568 aa33.24■■■□□ 2.91
SEC22C-207ENST00000423701 A2MP01023 1474 aa33.24■■■□□ 2.91
SEC22C-207ENST00000423701 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.23■■■□□ 2.91
SEC22C-207ENST00000423701 BCORL1Q5H9F3 1711 aa33.23■■■□□ 2.91
SEC22C-207ENST00000423701 AGLP35573 1532 aa33.21■■■□□ 2.91
SEC22C-207ENST00000423701 KDM4FA0A1W2PPD8 638 aa33.18■■■□□ 2.9
SEC22C-207ENST00000423701 ADAMTSL3P82987 1691 aa33.16■■■□□ 2.9
SEC22C-207ENST00000423701 DHX29Q7Z478 1369 aaKnown RBP33.13■■■□□ 2.89
SEC22C-207ENST00000423701 PTPRKQ15262 1439 aa33.13■■■□□ 2.89
SEC22C-207ENST00000423701 ADGRL2O95490 1459 aa33.12■■■□□ 2.89
SEC22C-207ENST00000423701 CHIC2Q9UKJ5 165 aa33.12■■■□□ 2.89
SEC22C-207ENST00000423701 MLECQ14165 292 aa33.09■■■□□ 2.89
SEC22C-207ENST00000423701 KIF15Q9NS87 1388 aa33.09■■■□□ 2.89
SEC22C-207ENST00000423701 MADDQ8WXG6 1647 aa33.08■■■□□ 2.89
SEC22C-207ENST00000423701 ANKRD30AQ9BXX3 1397 aa33.08■■■□□ 2.89
SEC22C-207ENST00000423701 NCOA1Q15788 1441 aa33.07■■■□□ 2.88
SEC22C-207ENST00000423701 DUOX2Q9NRD8 1548 aa33.07■■■□□ 2.88
SEC22C-207ENST00000423701 ITGAEP38570 1179 aa33.05■■■□□ 2.88
SEC22C-207ENST00000423701 RRP7BPQ9NSQ0 103 aa33.05■■■□□ 2.88
SEC22C-207ENST00000423701 FER1L4A9Z1Z3 1794 aa33.03■■■□□ 2.88
SEC22C-207ENST00000423701 EIF2AK4Q9P2K8 1649 aaKnown RBP33.02■■■□□ 2.88
SEC22C-207ENST00000423701 RIMS1Q86UR5 1692 aaKnown RBP32.99■■■□□ 2.87
SEC22C-207ENST00000423701 ROCK1Q13464 1354 aa32.98■■■□□ 2.87
SEC22C-207ENST00000423701 ERBINQ96RT1 1412 aa32.98■■■□□ 2.87
SEC22C-207ENST00000423701 KIF3BO15066 747 aa32.97■■■□□ 2.87
SEC22C-207ENST00000423701 RNF17Q9BXT8 1623 aaKnown RBP32.93■■■□□ 2.86
SEC22C-207ENST00000423701 GGT6Q6P531 493 aa32.93■■■□□ 2.86
SEC22C-207ENST00000423701 PTPRMP28827 1452 aa32.91■■■□□ 2.86
SEC22C-207ENST00000423701 ANKRD50Q9ULJ7 1429 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms