RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 TCOF1Q13428 1488 aaKnown RBP4.73□□□□□ -1.65
UBE2W-202ENST00000422906 WDR7Q9Y4E6 1490 aa4.73□□□□□ -1.65
UBE2W-202ENST00000422906 CRYBG1Q9Y4K1 1723 aa4.73□□□□□ -1.65
UBE2W-202ENST00000422906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.73□□□□□ -1.65
UBE2W-202ENST00000422906 FHOD3Q2V2M9 1422 aa4.72□□□□□ -1.65
UBE2W-202ENST00000422906 MARF1Q9Y4F3 1742 aaKnown RBP4.72□□□□□ -1.65
UBE2W-202ENST00000422906 NEO1Q92859 1461 aa4.72□□□□□ -1.65
UBE2W-202ENST00000422906 SHPRHQ149N8 1683 aa4.72□□□□□ -1.65
UBE2W-202ENST00000422906 ASXL2Q76L83 1435 aa4.71□□□□□ -1.66
UBE2W-202ENST00000422906 CROCC2H7BZ55 1655 aa4.7□□□□□ -1.66
UBE2W-202ENST00000422906 QRICH2Q9H0J4 1663 aa4.7□□□□□ -1.66
UBE2W-202ENST00000422906 TEX14Q8IWB6 1497 aa4.69□□□□□ -1.66
UBE2W-202ENST00000422906 PRG4Q92954 1404 aaPredicted RBP4.69□□□□□ -1.66
UBE2W-202ENST00000422906 UBR1Q8IWV7 1749 aa4.68□□□□□ -1.66
UBE2W-202ENST00000422906 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.68□□□□□ -1.66
UBE2W-202ENST00000422906 DNMT1P26358 1616 aaKnown RBP4.68□□□□□ -1.66
UBE2W-202ENST00000422906 PTPRTO14522 1441 aa4.68□□□□□ -1.66
UBE2W-202ENST00000422906 MAGI2Q86UL8 1455 aa4.68□□□□□ -1.66
UBE2W-202ENST00000422906 SUPT6HQ7KZ85 1726 aaKnown RBP4.67□□□□□ -1.66
UBE2W-202ENST00000422906 SPHKAPQ2M3C7 1700 aa4.67□□□□□ -1.66
UBE2W-202ENST00000422906 MED14O60244 1454 aa4.67□□□□□ -1.66
UBE2W-202ENST00000422906 COL22A1Q8NFW1 1626 aaPredicted RBP4.66□□□□□ -1.66
UBE2W-202ENST00000422906 UGGT1Q9NYU2 1555 aa4.66□□□□□ -1.66
UBE2W-202ENST00000422906 PLA2R1Q13018 1463 aa4.66□□□□□ -1.66
UBE2W-202ENST00000422906 PRXQ9BXM0 1461 aa4.66□□□□□ -1.66
UBE2W-202ENST00000422906 NHSL1Q5SYE7 1610 aa4.66□□□□□ -1.66
UBE2W-202ENST00000422906 EFCAB5A4FU69 1503 aa4.66□□□□□ -1.66
UBE2W-202ENST00000422906 ABCC1P33527 1531 aa4.66□□□□□ -1.66
UBE2W-202ENST00000422906 PIK3C2BO00750 1634 aa4.65□□□□□ -1.66
UBE2W-202ENST00000422906 ABCA3Q99758 1704 aa4.65□□□□□ -1.66
UBE2W-202ENST00000422906 TDRD9Q8NDG6 1382 aaKnown RBP4.64□□□□□ -1.67
UBE2W-202ENST00000422906 TET3O43151 1660 aa4.64□□□□□ -1.67
UBE2W-202ENST00000422906 EIF2AK4Q9P2K8 1649 aaKnown RBP4.64□□□□□ -1.67
UBE2W-202ENST00000422906 MAP3K1Q13233 1512 aa4.64□□□□□ -1.67
UBE2W-202ENST00000422906 RGPD3A6NKT7 1758 aaPredicted RBP4.63□□□□□ -1.67
UBE2W-202ENST00000422906 RGPD4Q7Z3J3 1758 aa4.63□□□□□ -1.67
UBE2W-202ENST00000422906 PCDH10Q9P2E7 1040 aa4.63□□□□□ -1.67
UBE2W-202ENST00000422906 IGF1RP08069 1367 aa4.63□□□□□ -1.67
UBE2W-202ENST00000422906 COL16A1Q07092 1604 aaPredicted RBP4.63□□□□□ -1.67
UBE2W-202ENST00000422906 RREB1Q92766 1687 aa4.62□□□□□ -1.67
UBE2W-202ENST00000422906 MAST1Q9Y2H9 1570 aa4.62□□□□□ -1.67
UBE2W-202ENST00000422906 KDM5DQ9BY66 1539 aa4.62□□□□□ -1.67
UBE2W-202ENST00000422906 NUP153P49790 1475 aaKnown RBP4.62□□□□□ -1.67
UBE2W-202ENST00000422906 RAPGEF2Q9Y4G8 1499 aa4.62□□□□□ -1.67
UBE2W-202ENST00000422906 IQGAP1P46940 1657 aa4.62□□□□□ -1.67
UBE2W-202ENST00000422906 CHD2O14647 1828 aaKnown RBP4.62□□□□□ -1.67
UBE2W-202ENST00000422906 NCOA1Q15788 1441 aa4.61□□□□□ -1.67
UBE2W-202ENST00000422906 UACAQ9BZF9 1416 aa4.61□□□□□ -1.67
UBE2W-202ENST00000422906 CLTCQ00610 1675 aaKnown RBP4.61□□□□□ -1.67
UBE2W-202ENST00000422906 PHLDB1Q86UU1 1377 aa4.61□□□□□ -1.67
UBE2W-202ENST00000422906 NRXN3Q9Y4C0 1643 aa4.6□□□□□ -1.67
UBE2W-202ENST00000422906 SAMD9LQ8IVG5 1584 aa4.6□□□□□ -1.67
UBE2W-202ENST00000422906 WNK3Q9BYP7 1800 aa4.6□□□□□ -1.67
UBE2W-202ENST00000422906 ZFYVE16Q7Z3T8 1539 aa4.6□□□□□ -1.67
UBE2W-202ENST00000422906 ATP10BO94823 1461 aa4.59□□□□□ -1.67
UBE2W-202ENST00000422906 PTPN23Q9H3S7 1636 aa4.59□□□□□ -1.67
UBE2W-202ENST00000422906 TNS1Q9HBL0 1735 aaKnown RBP4.59□□□□□ -1.67
UBE2W-202ENST00000422906 UNC13BO14795 1591 aa4.59□□□□□ -1.67
UBE2W-202ENST00000422906 WRNQ14191 1432 aaPredicted RBP eCLIP4.59□□□□□ -1.68
UBE2W-202ENST00000422906 HOXD11P31277 338 aaPredicted RBP4.58□□□□□ -1.68
UBE2W-202ENST00000422906 ZNF518AQ6AHZ1 1483 aa4.58□□□□□ -1.68
UBE2W-202ENST00000422906 SETD1BQ9UPS6 1966 aaKnown RBP4.58□□□□□ -1.68
UBE2W-202ENST00000422906 XRN1Q8IZH2 1706 aaKnown RBP4.57□□□□□ -1.68
UBE2W-202ENST00000422906 ILDR2Q71H61 639 aa4.57□□□□□ -1.68
UBE2W-202ENST00000422906 CAMSAP1Q5T5Y3 1602 aa4.57□□□□□ -1.68
UBE2W-202ENST00000422906 QSER1Q2KHR3 1735 aa4.57□□□□□ -1.68
UBE2W-202ENST00000422906 PRAG1Q86YV5 1406 aa4.57□□□□□ -1.68
UBE2W-202ENST00000422906 MLH3Q9UHC1 1453 aa4.57□□□□□ -1.68
UBE2W-202ENST00000422906 POGZQ7Z3K3 1410 aa4.56□□□□□ -1.68
UBE2W-202ENST00000422906 LRP6O75581 1613 aa4.56□□□□□ -1.68
UBE2W-202ENST00000422906 EFCAB6Q5THR3 1501 aa4.56□□□□□ -1.68
UBE2W-202ENST00000422906 AHDC1Q5TGY3 1603 aaPredicted RBP4.56□□□□□ -1.68
UBE2W-202ENST00000422906 IQGAP3Q86VI3 1631 aa4.55□□□□□ -1.68
UBE2W-202ENST00000422906 NPATQ14207 1427 aa4.55□□□□□ -1.68
UBE2W-202ENST00000422906 NRAPQ86VF7 1730 aa4.55□□□□□ -1.68
UBE2W-202ENST00000422906 TNIKQ9UKE5 1360 aa4.55□□□□□ -1.68
UBE2W-202ENST00000422906 SLIT1O75093 1534 aa4.55□□□□□ -1.68
UBE2W-202ENST00000422906 DMRT2Q9Y5R5 561 aa4.55□□□□□ -1.68
UBE2W-202ENST00000422906 IFT172Q9UG01 1749 aa4.55□□□□□ -1.68
UBE2W-202ENST00000422906 CPS1P31327 1500 aa4.55□□□□□ -1.68
UBE2W-202ENST00000422906 CASZ1Q86V15 1759 aa4.54□□□□□ -1.68
UBE2W-202ENST00000422906 CYB5RLQ6IPT4 315 aa4.54□□□□□ -1.68
UBE2W-202ENST00000422906 ARHGAP23Q9P227 1491 aa4.54□□□□□ -1.68
UBE2W-202ENST00000422906 MYO5BQ9ULV0 1848 aa4.54□□□□□ -1.68
UBE2W-202ENST00000422906 GPATCH8Q9UKJ3 1502 aaKnown RBP4.54□□□□□ -1.68
UBE2W-202ENST00000422906 DISP3Q9P2K9 1392 aa4.53□□□□□ -1.68
UBE2W-202ENST00000422906 USP32Q8NFA0 1604 aa4.53□□□□□ -1.68
UBE2W-202ENST00000422906 CD109Q6YHK3 1445 aa4.53□□□□□ -1.68
UBE2W-202ENST00000422906 NALCNQ8IZF0 1738 aa4.52□□□□□ -1.69
UBE2W-202ENST00000422906 CACNB1Q02641 598 aaPredicted RBP4.52□□□□□ -1.69
UBE2W-202ENST00000422906 TMEM131LA2VDJ0 1609 aa4.51□□□□□ -1.69
UBE2W-202ENST00000422906 PRDM15P57071 1507 aaPredicted RBP4.51□□□□□ -1.69
UBE2W-202ENST00000422906 IFFO2Q5TF58 517 aa4.51□□□□□ -1.69
UBE2W-202ENST00000422906 BRWD3Q6RI45 1802 aa4.5□□□□□ -1.69
UBE2W-202ENST00000422906 CDK12Q9NYV4 1490 aaPredicted RBP4.49□□□□□ -1.69
UBE2W-202ENST00000422906 CEP152O94986 1710 aa4.49□□□□□ -1.69
UBE2W-202ENST00000422906 ROBO1Q9Y6N7 1651 aa4.49□□□□□ -1.69
UBE2W-202ENST00000422906 ADRA2BP18089 450 aa4.49□□□□□ -1.69
UBE2W-202ENST00000422906 ARHGEF5Q12774 1597 aa4.49□□□□□ -1.69
UBE2W-202ENST00000422906 EP400Q96L91 3159 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms