RNA–Protein interactions for RNA: ENST00000418880.1

ACAA1-204, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 3

Gene ACAA1, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-204ENST00000418880 SCAPERQ9BY12 1400 aa31.66■■■□□ 2.66
ACAA1-204ENST00000418880 PREX2Q70Z35 1606 aa31.65■■■□□ 2.66
ACAA1-204ENST00000418880 MTUS2Q5JR59 1369 aa31.65■■■□□ 2.66
ACAA1-204ENST00000418880 VPS8Q8N3P4 1428 aa31.65■■■□□ 2.66
ACAA1-204ENST00000418880 CDC42BPAQ5VT25 1732 aa31.61■■■□□ 2.65
ACAA1-204ENST00000418880 ZMYM4Q5VZL5 1548 aa31.6■■■□□ 2.65
ACAA1-204ENST00000418880 POGZQ7Z3K3 1410 aa31.6■■■□□ 2.65
ACAA1-204ENST00000418880 EHBP1L1Q8N3D4 1523 aa31.58■■■□□ 2.65
ACAA1-204ENST00000418880 ARHGEF40Q8TER5 1519 aa31.56■■■□□ 2.64
ACAA1-204ENST00000418880 MAGI2Q86UL8 1455 aa31.55■■■□□ 2.64
ACAA1-204ENST00000418880 GPATCH8Q9UKJ3 1502 aaKnown RBP31.53■■■□□ 2.64
ACAA1-204ENST00000418880 ZNF518AQ6AHZ1 1483 aa31.52■■■□□ 2.64
ACAA1-204ENST00000418880 TIAM1Q13009 1591 aa31.51■■■□□ 2.64
ACAA1-204ENST00000418880 ZFYVE16Q7Z3T8 1539 aa31.51■■■□□ 2.63
ACAA1-204ENST00000418880 CCNB3Q8WWL7 1395 aa31.5■■■□□ 2.63
ACAA1-204ENST00000418880 ABCC1P33527 1531 aa31.49■■■□□ 2.63
ACAA1-204ENST00000418880 ITSN2Q9NZM3 1697 aa31.45■■■□□ 2.63
ACAA1-204ENST00000418880 KDM5CP41229 1560 aa31.45■■■□□ 2.63
ACAA1-204ENST00000418880 YEATS2Q9ULM3 1422 aa31.45■■■□□ 2.63
ACAA1-204ENST00000418880 AFAP1Q8N556 730 aa31.43■■■□□ 2.62
ACAA1-204ENST00000418880 CFDP1Q9UEE9 299 aaPredicted RBP31.43■■■□□ 2.62
ACAA1-204ENST00000418880 ZNF777Q9ULD5 760 aaPredicted RBP31.43■■■□□ 2.62
ACAA1-204ENST00000418880 SUPT6HQ7KZ85 1726 aaKnown RBP31.43■■■□□ 2.62
ACAA1-204ENST00000418880 MAP3K1Q13233 1512 aa31.43■■■□□ 2.62
ACAA1-204ENST00000418880 ARHGEF12Q9NZN5 1544 aa31.42■■■□□ 2.62
ACAA1-204ENST00000418880 SAMD9LQ8IVG5 1584 aa31.42■■■□□ 2.62
ACAA1-204ENST00000418880 ARID4BQ4LE39 1312 aaPredicted RBP31.41■■■□□ 2.62
ACAA1-204ENST00000418880 TRAPPC8Q9Y2L5 1435 aa31.38■■■□□ 2.61
ACAA1-204ENST00000418880 LRRC9Q6ZRR7 1453 aa31.38■■■□□ 2.61
ACAA1-204ENST00000418880 HECW2Q9P2P5 1572 aa31.38■■■□□ 2.61
ACAA1-204ENST00000418880 NCOA2Q15596 1464 aa31.37■■■□□ 2.61
ACAA1-204ENST00000418880 PLEKHH2Q8IVE3 1493 aa31.37■■■□□ 2.61
ACAA1-204ENST00000418880 BCORL1Q5H9F3 1711 aa31.37■■■□□ 2.61
ACAA1-204ENST00000418880 ADAMTSL3P82987 1691 aa31.35■■■□□ 2.61
ACAA1-204ENST00000418880 ATP10AO60312 1499 aa31.35■■■□□ 2.61
ACAA1-204ENST00000418880 SYCP2Q9BX26 1530 aa31.34■■■□□ 2.61
ACAA1-204ENST00000418880 MLH3Q9UHC1 1453 aa31.34■■■□□ 2.61
ACAA1-204ENST00000418880 KIAA1107Q9UPP5 1409 aa31.34■■■□□ 2.61
ACAA1-204ENST00000418880 MYT1LQ9UL68 1186 aa31.34■■■□□ 2.61
ACAA1-204ENST00000418880 C9orf84Q5VXU9 1444 aa31.32■■■□□ 2.61
ACAA1-204ENST00000418880 APLP2Q06481 763 aa31.3■■■□□ 2.6
ACAA1-204ENST00000418880 HNRNPMP52272 730 aaKnown RBP eCLIP31.29■■■□□ 2.6
ACAA1-204ENST00000418880 SIGLEC1Q9BZZ2 1709 aa31.29■■■□□ 2.6
ACAA1-204ENST00000418880 KANK4Q5T7N3 995 aaPredicted RBP31.27■■■□□ 2.6
ACAA1-204ENST00000418880 DIP2CQ9Y2E4 1556 aa31.26■■■□□ 2.6
ACAA1-204ENST00000418880 KIDINS220Q9ULH0 1771 aa31.25■■■□□ 2.59
ACAA1-204ENST00000418880 ABCA6Q8N139 1617 aa31.24■■■□□ 2.59
ACAA1-204ENST00000418880 MADDQ8WXG6 1647 aa31.23■■■□□ 2.59
ACAA1-204ENST00000418880 REREQ9P2R6 1566 aa31.22■■■□□ 2.59
ACAA1-204ENST00000418880 SPAG9O60271 1321 aaKnown RBP31.22■■■□□ 2.59
ACAA1-204ENST00000418880 ZNF644Q9H582 1327 aaPredicted RBP31.22■■■□□ 2.59
ACAA1-204ENST00000418880 PTPRMP28827 1452 aa31.19■■■□□ 2.58
ACAA1-204ENST00000418880 MBD5Q9P267 1494 aa31.17■■■□□ 2.58
ACAA1-204ENST00000418880 CAMSAP2Q08AD1 1489 aa31.15■■■□□ 2.58
ACAA1-204ENST00000418880 ATP7AQ04656 1500 aa31.15■■■□□ 2.58
ACAA1-204ENST00000418880 MLECQ14165 292 aa31.15■■■□□ 2.58
ACAA1-204ENST00000418880 RIMS1Q86UR5 1692 aaKnown RBP31.15■■■□□ 2.58
ACAA1-204ENST00000418880 INO80Q9ULG1 1556 aaPredicted RBP31.14■■■□□ 2.58
ACAA1-204ENST00000418880 AGLP35573 1532 aa31.12■■■□□ 2.57
ACAA1-204ENST00000418880 FER1L4A9Z1Z3 1794 aa31.12■■■□□ 2.57
ACAA1-204ENST00000418880 RSPH4AQ5TD94 716 aa31.11■■■□□ 2.57
ACAA1-204ENST00000418880 MYOM3Q5VTT5 1437 aa31.1■■■□□ 2.57
ACAA1-204ENST00000418880 CCDC141Q6ZP82 1450 aa31.08■■■□□ 2.57
ACAA1-204ENST00000418880 MIA2Q96PC5 1412 aa31.08■■■□□ 2.57
ACAA1-204ENST00000418880 RTEL1-TNFRSF6BF6WH68 1400 aa31.07■■■□□ 2.56
ACAA1-204ENST00000418880 ARHGEF5Q12774 1597 aa31.05■■■□□ 2.56
ACAA1-204ENST00000418880 ADGBQ8N7X0 1667 aa31.03■■■□□ 2.56
ACAA1-204ENST00000418880 A2MP01023 1474 aa31.01■■■□□ 2.55
ACAA1-204ENST00000418880 PLXNC1O60486 1568 aa30.98■■■□□ 2.55
ACAA1-204ENST00000418880 TSPY4P0CV99 314 aa30.97■■■□□ 2.55
ACAA1-204ENST00000418880 TSPY10P0CW01 314 aa30.97■■■□□ 2.55
ACAA1-204ENST00000418880 ESF1Q9H501 851 aaKnown RBP30.93■■■□□ 2.54
ACAA1-204ENST00000418880 PLPPR3Q6T4P5 718 aa30.92■■■□□ 2.54
ACAA1-204ENST00000418880 PTPN23Q9H3S7 1636 aa30.91■■■□□ 2.54
ACAA1-204ENST00000418880 FGD6Q6ZV73 1430 aa30.9■■■□□ 2.54
ACAA1-204ENST00000418880 MAST1Q9Y2H9 1570 aa30.89■■■□□ 2.54
ACAA1-204ENST00000418880 DHX29Q7Z478 1369 aaKnown RBP30.89■■■□□ 2.54
ACAA1-204ENST00000418880 CNTLNQ9NXG0 1405 aa30.87■■■□□ 2.53
ACAA1-204ENST00000418880 TCOF1Q13428 1488 aaKnown RBP30.84■■■□□ 2.53
ACAA1-204ENST00000418880 CEBPAP49715 358 aaPredicted RBP30.82■■■□□ 2.52
ACAA1-204ENST00000418880 GGT6Q6P531 493 aa30.81■■■□□ 2.52
ACAA1-204ENST00000418880 C3P01024 1663 aa30.81■■■□□ 2.52
ACAA1-204ENST00000418880 PPP6R1Q9UPN7 881 aa30.8■■■□□ 2.52
ACAA1-204ENST00000418880 LMTK3Q96Q04 1460 aa30.8■■■□□ 2.52
ACAA1-204ENST00000418880 MROH2AA6NES4 1674 aa30.8■■■□□ 2.52
ACAA1-204ENST00000418880 SETD1BQ9UPS6 1966 aaKnown RBP30.79■■■□□ 2.52
ACAA1-204ENST00000418880 CROCC2H7BZ55 1655 aa30.78■■■□□ 2.52
ACAA1-204ENST00000418880 SHANK2Q9UPX8 1470 aa30.77■■■□□ 2.52
ACAA1-204ENST00000418880 ABCC5O15440 1437 aa30.77■■■□□ 2.52
ACAA1-204ENST00000418880 DNMT1P26358 1616 aaKnown RBP30.76■■■□□ 2.52
ACAA1-204ENST00000418880 DAPK1P53355 1430 aa30.75■■■□□ 2.51
ACAA1-204ENST00000418880 KIF3BO15066 747 aa30.75■■■□□ 2.51
ACAA1-204ENST00000418880 CLTCQ00610 1675 aaKnown RBP30.74■■■□□ 2.51
ACAA1-204ENST00000418880 PREX1Q8TCU6 1659 aa30.74■■■□□ 2.51
ACAA1-204ENST00000418880 ZMYM3Q14202 1370 aa30.71■■■□□ 2.51
ACAA1-204ENST00000418880 DUOX2Q9NRD8 1548 aa30.68■■■□□ 2.5
ACAA1-204ENST00000418880 FAM135AQ9P2D6 1515 aa30.68■■■□□ 2.5
ACAA1-204ENST00000418880 EIF2AK4Q9P2K8 1649 aaKnown RBP30.67■■■□□ 2.5
ACAA1-204ENST00000418880 FAM50AQ14320 339 aaKnown RBP30.67■■■□□ 2.5
ACAA1-204ENST00000418880 UHRF1BP1Q6BDS2 1440 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms