RNA–Protein interactions for RNA: ENST00000418590.3

SBF1-204, Transcript of SET binding factor 1, humanhuman

TSL 1 (best)

Gene SBF1, Length 1,578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-204ENST00000418590 PTPN23Q9H3S7 1636 aa24.22■■□□□ 1.47
SBF1-204ENST00000418590 TCOF1Q13428 1488 aaKnown RBP24.2■■□□□ 1.47
SBF1-204ENST00000418590 ITSN2Q9NZM3 1697 aa24.2■■□□□ 1.47
SBF1-204ENST00000418590 GPATCH8Q9UKJ3 1502 aaKnown RBP24.19■■□□□ 1.46
SBF1-204ENST00000418590 FAM50AQ14320 339 aaKnown RBP24.19■■□□□ 1.46
SBF1-204ENST00000418590 CDC42BPAQ5VT25 1732 aa24.14■■□□□ 1.46
SBF1-204ENST00000418590 ABCA9Q8IUA7 1624 aa24.14■■□□□ 1.45
SBF1-204ENST00000418590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.14■■□□□ 1.45
SBF1-204ENST00000418590 TTC37Q6PGP7 1564 aa24.12■■□□□ 1.45
SBF1-204ENST00000418590 ITGAEP38570 1179 aa24.09■■□□□ 1.45
SBF1-204ENST00000418590 PREX2Q70Z35 1606 aa24.09■■□□□ 1.45
SBF1-204ENST00000418590 KDM4FA0A1W2PPD8 638 aa24.08■■□□□ 1.44
SBF1-204ENST00000418590 CFDP1Q9UEE9 299 aaPredicted RBP24.07■■□□□ 1.44
SBF1-204ENST00000418590 CAMSAP2Q08AD1 1489 aa24.06■■□□□ 1.44
SBF1-204ENST00000418590 MYO5CQ9NQX4 1742 aa24.03■■□□□ 1.44
SBF1-204ENST00000418590 CDC42BPBQ9Y5S2 1711 aa24.03■■□□□ 1.44
SBF1-204ENST00000418590 PTPRKQ15262 1439 aa24.03■■□□□ 1.44
SBF1-204ENST00000418590 ZNF644Q9H582 1327 aaPredicted RBP24.02■■□□□ 1.44
SBF1-204ENST00000418590 RAPGEF3O95398 923 aa24.01■■□□□ 1.43
SBF1-204ENST00000418590 DNMT1P26358 1616 aaKnown RBP24.01■■□□□ 1.43
SBF1-204ENST00000418590 DAPK1P53355 1430 aa23.97■■□□□ 1.43
SBF1-204ENST00000418590 ARHGAP5Q13017 1502 aa23.97■■□□□ 1.43
SBF1-204ENST00000418590 PLCH2O75038 1416 aa23.97■■□□□ 1.43
SBF1-204ENST00000418590 SAMD9LQ8IVG5 1584 aa23.97■■□□□ 1.43
SBF1-204ENST00000418590 ARAP3Q8WWN8 1544 aa23.96■■□□□ 1.43
SBF1-204ENST00000418590 ZNF777Q9ULD5 760 aaPredicted RBP23.95■■□□□ 1.43
SBF1-204ENST00000418590 ABCC5O15440 1437 aa23.95■■□□□ 1.42
SBF1-204ENST00000418590 ADGRL1O94910 1474 aa23.95■■□□□ 1.42
SBF1-204ENST00000418590 NEO1Q92859 1461 aa23.92■■□□□ 1.42
SBF1-204ENST00000418590 SETD5Q9C0A6 1442 aa23.92■■□□□ 1.42
SBF1-204ENST00000418590 FANCAO15360 1455 aa23.91■■□□□ 1.42
SBF1-204ENST00000418590 HFM1A2PYH4 1435 aa23.91■■□□□ 1.42
SBF1-204ENST00000418590 CROCC2H7BZ55 1655 aa23.91■■□□□ 1.42
SBF1-204ENST00000418590 AKNAQ7Z591 1439 aa23.9■■□□□ 1.42
SBF1-204ENST00000418590 FRMPD1Q5SYB0 1578 aa23.9■■□□□ 1.42
SBF1-204ENST00000418590 ARHGEF5Q12774 1597 aa23.89■■□□□ 1.42
SBF1-204ENST00000418590 RAB3GAP2Q9H2M9 1393 aa23.89■■□□□ 1.41
SBF1-204ENST00000418590 MBD5Q9P267 1494 aa23.88■■□□□ 1.41
SBF1-204ENST00000418590 PLEKHH2Q8IVE3 1493 aa23.87■■□□□ 1.41
SBF1-204ENST00000418590 SHANK2Q9UPX8 1470 aa23.86■■□□□ 1.41
SBF1-204ENST00000418590 SYCP2Q9BX26 1530 aa23.86■■□□□ 1.41
SBF1-204ENST00000418590 NAIPQ13075 1403 aa23.85■■□□□ 1.41
SBF1-204ENST00000418590 KIAA1107Q9UPP5 1409 aa23.85■■□□□ 1.41
SBF1-204ENST00000418590 ROCK1Q13464 1354 aa23.85■■□□□ 1.41
SBF1-204ENST00000418590 GCC2Q8IWJ2 1684 aa23.85■■□□□ 1.41
SBF1-204ENST00000418590 ABCC1P33527 1531 aa23.84■■□□□ 1.41
SBF1-204ENST00000418590 HRCP23327 699 aa23.83■■□□□ 1.41
SBF1-204ENST00000418590 EFCAB2Q5VUJ9 269 aa23.83■■□□□ 1.41
SBF1-204ENST00000418590 CHIC2Q9UKJ5 165 aa23.83■■□□□ 1.41
SBF1-204ENST00000418590 CCDC141Q6ZP82 1450 aa23.83■■□□□ 1.4
SBF1-204ENST00000418590 ADGBQ8N7X0 1667 aa23.82■■□□□ 1.4
SBF1-204ENST00000418590 RICTORQ6R327 1708 aa23.82■■□□□ 1.4
SBF1-204ENST00000418590 DENND4BO75064 1496 aaPredicted RBP23.82■■□□□ 1.4
SBF1-204ENST00000418590 ADGRL2O95490 1459 aa23.82■■□□□ 1.4
SBF1-204ENST00000418590 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
SBF1-204ENST00000418590 CFAP74Q9C0B2 1584 aa23.81■■□□□ 1.4
SBF1-204ENST00000418590 HNRNPMP52272 730 aaKnown RBP eCLIP23.79■■□□□ 1.4
SBF1-204ENST00000418590 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
SBF1-204ENST00000418590 C9orf84Q5VXU9 1444 aa23.79■■□□□ 1.4
SBF1-204ENST00000418590 RSPH4AQ5TD94 716 aa23.78■■□□□ 1.4
SBF1-204ENST00000418590 RRP7BPQ9NSQ0 103 aa23.78■■□□□ 1.4
SBF1-204ENST00000418590 SCAPERQ9BY12 1400 aa23.77■■□□□ 1.4
SBF1-204ENST00000418590 DHX57Q6P158 1386 aaKnown RBP23.76■■□□□ 1.39
SBF1-204ENST00000418590 NCOA1Q15788 1441 aa23.75■■□□□ 1.39
SBF1-204ENST00000418590 MAST1Q9Y2H9 1570 aa23.75■■□□□ 1.39
SBF1-204ENST00000418590 ARID4BQ4LE39 1312 aaPredicted RBP23.74■■□□□ 1.39
SBF1-204ENST00000418590 YEATS2Q9ULM3 1422 aa23.73■■□□□ 1.39
SBF1-204ENST00000418590 ANKRD30AQ9BXX3 1397 aa23.73■■□□□ 1.39
SBF1-204ENST00000418590 TSPY4P0CV99 314 aa23.71■■□□□ 1.39
SBF1-204ENST00000418590 TSPY10P0CW01 314 aa23.71■■□□□ 1.39
SBF1-204ENST00000418590 TRAPPC8Q9Y2L5 1435 aa23.7■■□□□ 1.38
SBF1-204ENST00000418590 POGZQ7Z3K3 1410 aa23.69■■□□□ 1.38
SBF1-204ENST00000418590 ARHGEF40Q8TER5 1519 aa23.69■■□□□ 1.38
SBF1-204ENST00000418590 SIGLEC1Q9BZZ2 1709 aa23.68■■□□□ 1.38
SBF1-204ENST00000418590 ZEB1P37275 1124 aaPredicted RBP23.67■■□□□ 1.38
SBF1-204ENST00000418590 AFAP1Q8N556 730 aa23.67■■□□□ 1.38
SBF1-204ENST00000418590 ZFYVE16Q7Z3T8 1539 aa23.66■■□□□ 1.38
SBF1-204ENST00000418590 ZMYM4Q5VZL5 1548 aa23.65■■□□□ 1.38
SBF1-204ENST00000418590 PLXNC1O60486 1568 aa23.65■■□□□ 1.38
SBF1-204ENST00000418590 MYT1LQ9UL68 1186 aa23.64■■□□□ 1.37
SBF1-204ENST00000418590 KIF15Q9NS87 1388 aa23.62■■□□□ 1.37
SBF1-204ENST00000418590 MLECQ14165 292 aa23.62■■□□□ 1.37
SBF1-204ENST00000418590 PLPPR3Q6T4P5 718 aa23.61■■□□□ 1.37
SBF1-204ENST00000418590 CLSPNQ9HAW4 1339 aa23.61■■□□□ 1.37
SBF1-204ENST00000418590 BCORL1Q5H9F3 1711 aa23.61■■□□□ 1.37
SBF1-204ENST00000418590 ANKRD50Q9ULJ7 1429 aa23.61■■□□□ 1.37
SBF1-204ENST00000418590 ADAMTSL3P82987 1691 aa23.6■■□□□ 1.37
SBF1-204ENST00000418590 INO80Q9ULG1 1556 aaPredicted RBP23.59■■□□□ 1.37
SBF1-204ENST00000418590 RTEL1-TNFRSF6BF6WH68 1400 aa23.59■■□□□ 1.37
SBF1-204ENST00000418590 MADDQ8WXG6 1647 aa23.59■■□□□ 1.37
SBF1-204ENST00000418590 ZNF518AQ6AHZ1 1483 aa23.57■■□□□ 1.36
SBF1-204ENST00000418590 ACIN1Q9UKV3 1341 aaKnown RBP23.57■■□□□ 1.36
SBF1-204ENST00000418590 SPAG9O60271 1321 aaKnown RBP23.56■■□□□ 1.36
SBF1-204ENST00000418590 ATP7AQ04656 1500 aa23.55■■□□□ 1.36
SBF1-204ENST00000418590 KDM5CP41229 1560 aa23.55■■□□□ 1.36
SBF1-204ENST00000418590 MAGI2Q86UL8 1455 aa23.55■■□□□ 1.36
SBF1-204ENST00000418590 PTPRMP28827 1452 aa23.53■■□□□ 1.36
SBF1-204ENST00000418590 RIMS1Q86UR5 1692 aaKnown RBP23.53■■□□□ 1.36
SBF1-204ENST00000418590 DUOX2Q9NRD8 1548 aa23.53■■□□□ 1.36
SBF1-204ENST00000418590 ATP10AO60312 1499 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms