RNA–Protein interactions for RNA: ENST00000417996.2

KRT3-201, Transcript of keratin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT3, Length 2,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3-201ENST00000417996 ABCC5O15440 1437 aa28.52■■■□□ 2.16
KRT3-201ENST00000417996 EIF4G3O43432 1585 aaKnown RBP28.5■■■□□ 2.15
KRT3-201ENST00000417996 EIF4G2P78344 907 aaKnown RBP eCLIP28.5■■■□□ 2.15
KRT3-201ENST00000417996 DNMT1P26358 1616 aaKnown RBP28.5■■■□□ 2.15
KRT3-201ENST00000417996 ROCK1Q13464 1354 aa28.5■■■□□ 2.15
KRT3-201ENST00000417996 CDK11AQ9UQ88 783 aaPredicted RBP28.48■■■□□ 2.15
KRT3-201ENST00000417996 NEFLP07196 543 aa28.47■■■□□ 2.15
KRT3-201ENST00000417996 ANKRD30BQ9BXX2 1392 aa28.43■■■□□ 2.14
KRT3-201ENST00000417996 PRG4Q92954 1404 aaPredicted RBP28.42■■■□□ 2.14
KRT3-201ENST00000417996 SLC4A1APQ9BWU0 796 aaKnown RBP28.41■■■□□ 2.14
KRT3-201ENST00000417996 CHMP7Q8WUX9 453 aaPredicted RBP28.4■■■□□ 2.14
KRT3-201ENST00000417996 MYT1Q01538 1121 aa28.39■■■□□ 2.14
KRT3-201ENST00000417996 RPRD2Q5VT52 1461 aaKnown RBP28.39■■■□□ 2.14
KRT3-201ENST00000417996 FBLN2P98095 1184 aa28.37■■■□□ 2.13
KRT3-201ENST00000417996 HNRNPUQ00839 825 aaKnown RBP eCLIP28.37■■■□□ 2.13
KRT3-201ENST00000417996 NBPF8Q3BBV2 869 aa28.37■■■□□ 2.13
KRT3-201ENST00000417996 PLB1Q6P1J6 1458 aa28.37■■■□□ 2.13
KRT3-201ENST00000417996 TROQ12816 1431 aaPredicted RBP28.37■■■□□ 2.13
KRT3-201ENST00000417996 C11orf95C9JLR9 678 aaPredicted RBP28.36■■■□□ 2.13
KRT3-201ENST00000417996 CFDP1Q9UEE9 299 aaPredicted RBP28.36■■■□□ 2.13
KRT3-201ENST00000417996 ERCC6Q03468 1493 aa28.36■■■□□ 2.13
KRT3-201ENST00000417996 CEP170Q5SW79 1584 aa28.35■■■□□ 2.13
KRT3-201ENST00000417996 CAMSAP2Q08AD1 1489 aa28.35■■■□□ 2.13
KRT3-201ENST00000417996 CNTLNQ9NXG0 1405 aa28.34■■■□□ 2.13
KRT3-201ENST00000417996 TEX14Q8IWB6 1497 aa28.34■■■□□ 2.13
KRT3-201ENST00000417996 ZNF777Q9ULD5 760 aaPredicted RBP28.34■■■□□ 2.13
KRT3-201ENST00000417996 MAGI1Q96QZ7 1491 aaPredicted RBP28.33■■■□□ 2.13
KRT3-201ENST00000417996 NCOA1Q15788 1441 aa28.3■■■□□ 2.12
KRT3-201ENST00000417996 CCDC7Q96M83 1385 aa28.3■■■□□ 2.12
KRT3-201ENST00000417996 KIF14Q15058 1648 aa28.29■■■□□ 2.12
KRT3-201ENST00000417996 SYNJ2O15056 1496 aa28.29■■■□□ 2.12
KRT3-201ENST00000417996 GPATCH8Q9UKJ3 1502 aaKnown RBP28.28■■■□□ 2.12
KRT3-201ENST00000417996 ITSN2Q9NZM3 1697 aa28.28■■■□□ 2.12
KRT3-201ENST00000417996 PZPP20742 1482 aa28.26■■■□□ 2.11
KRT3-201ENST00000417996 CCDC184Q52MB2 194 aa28.25■■■□□ 2.11
KRT3-201ENST00000417996 JPH4Q96JJ6 628 aa28.23■■■□□ 2.11
KRT3-201ENST00000417996 ADGBQ8N7X0 1667 aa28.23■■■□□ 2.11
KRT3-201ENST00000417996 CARMIL2Q6F5E8 1435 aa28.23■■■□□ 2.11
KRT3-201ENST00000417996 ADCY10Q96PN6 1610 aa28.21■■■□□ 2.11
KRT3-201ENST00000417996 PRKRIP1Q9H875 184 aaPredicted RBP28.2■■■□□ 2.1
KRT3-201ENST00000417996 KIF7Q2M1P5 1343 aa28.18■■■□□ 2.1
KRT3-201ENST00000417996 SPATA31E1Q6ZUB1 1445 aa28.18■■■□□ 2.1
KRT3-201ENST00000417996 CROCC2H7BZ55 1655 aa28.17■■■□□ 2.1
KRT3-201ENST00000417996 ADGRL2O95490 1459 aa28.16■■■□□ 2.1
KRT3-201ENST00000417996 NUP160Q12769 1436 aa28.16■■■□□ 2.1
KRT3-201ENST00000417996 ANKRD30AQ9BXX3 1397 aa28.15■■■□□ 2.1
KRT3-201ENST00000417996 KIAA1107Q9UPP5 1409 aa28.14■■■□□ 2.1
KRT3-201ENST00000417996 PKD2Q13563 968 aa28.14■■■□□ 2.09
KRT3-201ENST00000417996 FAM9BQ8IZU0 186 aa28.13■■■□□ 2.09
KRT3-201ENST00000417996 ZNF326Q5BKZ1 582 aaKnown RBP28.13■■■□□ 2.09
KRT3-201ENST00000417996 IRX6P78412 446 aaPredicted RBP28.12■■■□□ 2.09
KRT3-201ENST00000417996 MRS2Q9HD23 443 aa28.12■■■□□ 2.09
KRT3-201ENST00000417996 PLEKHD1A6NEE1 506 aa28.12■■■□□ 2.09
KRT3-201ENST00000417996 ANKRD50Q9ULJ7 1429 aa28.09■■■□□ 2.09
KRT3-201ENST00000417996 POLR1AO95602 1720 aaPredicted RBP28.09■■■□□ 2.09
KRT3-201ENST00000417996 MBD5Q9P267 1494 aa28.08■■■□□ 2.09
KRT3-201ENST00000417996 CDC42BPAQ5VT25 1732 aa28.07■■■□□ 2.08
KRT3-201ENST00000417996 ABCA8O94911 1581 aa28.06■■■□□ 2.08
KRT3-201ENST00000417996 ATP10BO94823 1461 aa28.05■■■□□ 2.08
KRT3-201ENST00000417996 ABCC10Q5T3U5 1492 aa28.03■■■□□ 2.08
KRT3-201ENST00000417996 POLR3GLQ9BT43 218 aa28.03■■■□□ 2.08
KRT3-201ENST00000417996 C9orf84Q5VXU9 1444 aa28.02■■■□□ 2.08
KRT3-201ENST00000417996 USP47Q96K76 1375 aa28.02■■■□□ 2.08
KRT3-201ENST00000417996 NUP155O75694 1391 aa28.01■■■□□ 2.08
KRT3-201ENST00000417996 CNGB1Q14028 1251 aaPredicted RBP28■■■□□ 2.07
KRT3-201ENST00000417996 RBM19Q9Y4C8 960 aaKnown RBP28■■■□□ 2.07
KRT3-201ENST00000417996 TSPY4P0CV99 314 aa27.97■■■□□ 2.07
KRT3-201ENST00000417996 TSPY10P0CW01 314 aa27.97■■■□□ 2.07
KRT3-201ENST00000417996 BCORL1Q5H9F3 1711 aa27.97■■■□□ 2.07
KRT3-201ENST00000417996 SHANK2Q9UPX8 1470 aa27.97■■■□□ 2.07
KRT3-201ENST00000417996 HNRNPMP52272 730 aaKnown RBP eCLIP27.95■■■□□ 2.07
KRT3-201ENST00000417996 ZBED9Q6R2W3 1325 aa27.94■■■□□ 2.06
KRT3-201ENST00000417996 KDM5CP41229 1560 aa27.92■■■□□ 2.06
KRT3-201ENST00000417996 DHX29Q7Z478 1369 aaKnown RBP27.92■■■□□ 2.06
KRT3-201ENST00000417996 KIF15Q9NS87 1388 aa27.9■■■□□ 2.06
KRT3-201ENST00000417996 KDM2AQ9Y2K7 1162 aa27.88■■■□□ 2.05
KRT3-201ENST00000417996 ANP32EQ9BTT0 268 aa27.87■■■□□ 2.05
KRT3-201ENST00000417996 UHRF1BP1Q6BDS2 1440 aa27.87■■■□□ 2.05
KRT3-201ENST00000417996 PTPRGP23470 1445 aa27.86■■■□□ 2.05
KRT3-201ENST00000417996 CARD11Q9BXL7 1154 aa27.86■■■□□ 2.05
KRT3-201ENST00000417996 RALGAPBQ86X10 1494 aa27.85■■■□□ 2.05
KRT3-201ENST00000417996 KDM5DQ9BY66 1539 aa27.85■■■□□ 2.05
KRT3-201ENST00000417996 ARHGEF5Q12774 1597 aa27.82■■■□□ 2.04
KRT3-201ENST00000417996 ERICH6BQ5W0A0 696 aa27.82■■■□□ 2.04
KRT3-201ENST00000417996 ARHGEF12Q9NZN5 1544 aa27.81■■■□□ 2.04
KRT3-201ENST00000417996 ARID4BQ4LE39 1312 aaPredicted RBP27.81■■■□□ 2.04
KRT3-201ENST00000417996 DCAF11Q8TEB1 546 aa27.81■■■□□ 2.04
KRT3-201ENST00000417996 PPP4R2Q9NY27 417 aa27.81■■■□□ 2.04
KRT3-201ENST00000417996 SAMD9LQ8IVG5 1584 aa27.79■■■□□ 2.04
KRT3-201ENST00000417996 CCDC141Q6ZP82 1450 aa27.78■■■□□ 2.04
KRT3-201ENST00000417996 CDC42BPBQ9Y5S2 1711 aa27.77■■■□□ 2.04
KRT3-201ENST00000417996 ST20-MTHFSA0A0A6YYL1 179 aa27.76■■■□□ 2.03
KRT3-201ENST00000417996 PREX2Q70Z35 1606 aa27.74■■■□□ 2.03
KRT3-201ENST00000417996 ROCK2O75116 1388 aaKnown RBP27.74■■■□□ 2.03
KRT3-201ENST00000417996 FAM135AQ9P2D6 1515 aa27.73■■■□□ 2.03
KRT3-201ENST00000417996 SENP3-EIF4A1A0A087X0R7 540 aa27.7■■■□□ 2.03
KRT3-201ENST00000417996 B4GALNT3Q6L9W6 998 aa27.7■■■□□ 2.02
KRT3-201ENST00000417996 SYCP2Q9BX26 1530 aa27.68■■■□□ 2.02
KRT3-201ENST00000417996 RSPH4AQ5TD94 716 aa27.67■■■□□ 2.02
KRT3-201ENST00000417996 TMC1Q8TDI8 760 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms