RNA–Protein interactions for RNA: ENST00000417466.5

VGLL4-205, Transcript of vestigial like family member 4, humanhuman

TSL 3

Gene VGLL4, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-205ENST00000417466 MAGI2Q86UL8 1455 aa36.81■■■■□ 3.48
VGLL4-205ENST00000417466 KIF14Q15058 1648 aa36.81■■■■□ 3.48
VGLL4-205ENST00000417466 POGZQ7Z3K3 1410 aa36.78■■■■□ 3.48
VGLL4-205ENST00000417466 SIGLEC1Q9BZZ2 1709 aa36.78■■■■□ 3.48
VGLL4-205ENST00000417466 TROQ12816 1431 aaPredicted RBP36.77■■■■□ 3.48
VGLL4-205ENST00000417466 EFCAB2Q5VUJ9 269 aa36.77■■■■□ 3.48
VGLL4-205ENST00000417466 RIMS1Q86UR5 1692 aaKnown RBP36.76■■■■□ 3.47
VGLL4-205ENST00000417466 CLIP1P30622 1438 aa36.7■■■■□ 3.47
VGLL4-205ENST00000417466 PCF11O94913 1555 aaKnown RBP36.66■■■■□ 3.46
VGLL4-205ENST00000417466 CASKIN1Q8WXD9 1431 aa36.65■■■■□ 3.46
VGLL4-205ENST00000417466 ARHGAP5Q13017 1502 aa36.64■■■■□ 3.46
VGLL4-205ENST00000417466 ATP10AO60312 1499 aa36.62■■■■□ 3.45
VGLL4-205ENST00000417466 LMTK3Q96Q04 1460 aa36.62■■■■□ 3.45
VGLL4-205ENST00000417466 CCDC18Q5T9S5 1454 aa36.6■■■■□ 3.45
VGLL4-205ENST00000417466 CDC42BPBQ9Y5S2 1711 aa36.59■■■■□ 3.45
VGLL4-205ENST00000417466 ZNF518AQ6AHZ1 1483 aa36.59■■■■□ 3.45
VGLL4-205ENST00000417466 MLECQ14165 292 aa36.59■■■■□ 3.45
VGLL4-205ENST00000417466 C9orf84Q5VXU9 1444 aa36.56■■■■□ 3.44
VGLL4-205ENST00000417466 FER1L4A9Z1Z3 1794 aa36.55■■■■□ 3.44
VGLL4-205ENST00000417466 KDM5CP41229 1560 aa36.55■■■■□ 3.44
VGLL4-205ENST00000417466 AFAP1Q8N556 730 aa36.55■■■■□ 3.44
VGLL4-205ENST00000417466 PLPPR3Q6T4P5 718 aa36.53■■■■□ 3.44
VGLL4-205ENST00000417466 PREX2Q70Z35 1606 aa36.52■■■■□ 3.44
VGLL4-205ENST00000417466 FYCO1Q9BQS8 1478 aa36.5■■■■□ 3.43
VGLL4-205ENST00000417466 ARHGEF12Q9NZN5 1544 aa36.49■■■■□ 3.43
VGLL4-205ENST00000417466 ABCC1P33527 1531 aa36.43■■■■□ 3.42
VGLL4-205ENST00000417466 CDC42BPAQ5VT25 1732 aa36.42■■■■□ 3.42
VGLL4-205ENST00000417466 DIP2CQ9Y2E4 1556 aa36.42■■■■□ 3.42
VGLL4-205ENST00000417466 MYT1LQ9UL68 1186 aa36.42■■■■□ 3.42
VGLL4-205ENST00000417466 HSPA2P54652 639 aa36.41■■■■□ 3.42
VGLL4-205ENST00000417466 MLH3Q9UHC1 1453 aa36.4■■■■□ 3.42
VGLL4-205ENST00000417466 TRAPPC8Q9Y2L5 1435 aa36.4■■■■□ 3.42
VGLL4-205ENST00000417466 ITSN2Q9NZM3 1697 aa36.39■■■■□ 3.42
VGLL4-205ENST00000417466 ABCA6Q8N139 1617 aa36.37■■■■□ 3.41
VGLL4-205ENST00000417466 REREQ9P2R6 1566 aa36.36■■■■□ 3.41
VGLL4-205ENST00000417466 CEBPAP49715 358 aaPredicted RBP36.31■■■■□ 3.4
VGLL4-205ENST00000417466 FBXO41Q8TF61 875 aa36.31■■■■□ 3.4
VGLL4-205ENST00000417466 KIDINS220Q9ULH0 1771 aa36.28■■■■□ 3.4
VGLL4-205ENST00000417466 GPATCH8Q9UKJ3 1502 aaKnown RBP36.27■■■■□ 3.4
VGLL4-205ENST00000417466 PREX1Q8TCU6 1659 aa36.26■■■■□ 3.4
VGLL4-205ENST00000417466 SAMD9LQ8IVG5 1584 aa36.26■■■■□ 3.39
VGLL4-205ENST00000417466 AGLP35573 1532 aa36.25■■■■□ 3.39
VGLL4-205ENST00000417466 ZNF777Q9ULD5 760 aaPredicted RBP36.25■■■■□ 3.39
VGLL4-205ENST00000417466 SYCP2Q9BX26 1530 aa36.19■■■■□ 3.38
VGLL4-205ENST00000417466 HNRNPMP52272 730 aaKnown RBP eCLIP36.16■■■■□ 3.382e-6■■■■□ 23.2
VGLL4-205ENST00000417466 C3P01024 1663 aa36.15■■■■□ 3.38
VGLL4-205ENST00000417466 MTUS2Q5JR59 1369 aa36.14■■■■□ 3.38
VGLL4-205ENST00000417466 SETD1BQ9UPS6 1966 aaKnown RBP36.13■■■■□ 3.37
VGLL4-205ENST00000417466 CFDP1Q9UEE9 299 aaPredicted RBP36.13■■■■□ 3.37
VGLL4-205ENST00000417466 CCNB3Q8WWL7 1395 aa36.13■■■■□ 3.37
VGLL4-205ENST00000417466 SPAG9O60271 1321 aaKnown RBP36.1■■■■□ 3.37
VGLL4-205ENST00000417466 KIAA1107Q9UPP5 1409 aa36.1■■■■□ 3.37
VGLL4-205ENST00000417466 ESF1Q9H501 851 aaKnown RBP36.09■■■■□ 3.37
VGLL4-205ENST00000417466 UHRF1BP1Q6BDS2 1440 aa36.08■■■■□ 3.37
VGLL4-205ENST00000417466 PLEKHH2Q8IVE3 1493 aa36.08■■■■□ 3.37
VGLL4-205ENST00000417466 CEP162Q5TB80 1403 aa36.05■■■■□ 3.36
VGLL4-205ENST00000417466 ATP7AQ04656 1500 aa36.04■■■■□ 3.36
VGLL4-205ENST00000417466 STRCQ7RTU9 1775 aa36.04■■■■□ 3.36
VGLL4-205ENST00000417466 CNTLNQ9NXG0 1405 aa36.02■■■■□ 3.36
VGLL4-205ENST00000417466 INO80Q9ULG1 1556 aaPredicted RBP36.02■■■■□ 3.36
VGLL4-205ENST00000417466 SUPT6HQ7KZ85 1726 aaKnown RBP36.01■■■■□ 3.36
VGLL4-205ENST00000417466 EHBP1L1Q8N3D4 1523 aa36.01■■■■□ 3.36
VGLL4-205ENST00000417466 TIAM1Q13009 1591 aa36.01■■■■□ 3.35
VGLL4-205ENST00000417466 CERKQ8TCT0 537 aa35.97■■■■□ 3.35
VGLL4-205ENST00000417466 ZNF644Q9H582 1327 aaPredicted RBP35.96■■■■□ 3.35
VGLL4-205ENST00000417466 MROH2AA6NES4 1674 aa35.95■■■■□ 3.35
VGLL4-205ENST00000417466 PLXNC1O60486 1568 aa35.95■■■■□ 3.35
VGLL4-205ENST00000417466 A2MP01023 1474 aa35.94■■■■□ 3.34
VGLL4-205ENST00000417466 DMRT2Q9Y5R5 561 aa35.94■■■■□ 3.34
VGLL4-205ENST00000417466 MBD5Q9P267 1494 aa35.9■■■■□ 3.34
VGLL4-205ENST00000417466 ZMYM3Q14202 1370 aa35.89■■■■□ 3.34
VGLL4-205ENST00000417466 ADGBQ8N7X0 1667 aa35.87■■■■□ 3.33
VGLL4-205ENST00000417466 NPATQ14207 1427 aa35.86■■■■□ 3.33
VGLL4-205ENST00000417466 CLTCQ00610 1675 aaKnown RBP35.85■■■■□ 3.33
VGLL4-205ENST00000417466 GGT6Q6P531 493 aa35.81■■■■□ 3.32
VGLL4-205ENST00000417466 PTPRTO14522 1441 aa35.81■■■■□ 3.32
VGLL4-205ENST00000417466 NCOA2Q15596 1464 aa35.8■■■■□ 3.32
VGLL4-205ENST00000417466 RTEL1-TNFRSF6BF6WH68 1400 aa35.8■■■■□ 3.32
VGLL4-205ENST00000417466 NCOA1Q15788 1441 aa35.75■■■■□ 3.31
VGLL4-205ENST00000417466 LOC105371045A0A1W2PR82 267 aa35.73■■■■□ 3.31
VGLL4-205ENST00000417466 PPP6R1Q9UPN7 881 aa35.73■■■■□ 3.31
VGLL4-205ENST00000417466 CAMSAP2Q08AD1 1489 aa35.73■■■■□ 3.31
VGLL4-205ENST00000417466 DHX29Q7Z478 1369 aaKnown RBP35.71■■■■□ 3.31
VGLL4-205ENST00000417466 PTPRKQ15262 1439 aa35.71■■■■□ 3.31
VGLL4-205ENST00000417466 CAMSAP1Q5T5Y3 1602 aa35.71■■■■□ 3.31
VGLL4-205ENST00000417466 CCDC141Q6ZP82 1450 aa35.7■■■■□ 3.31
VGLL4-205ENST00000417466 MYO3AQ8NEV4 1616 aa35.68■■■■□ 3.3
VGLL4-205ENST00000417466 VPS8Q8N3P4 1428 aa35.67■■■■□ 3.3
VGLL4-205ENST00000417466 RSPH4AQ5TD94 716 aa35.66■■■■□ 3.3
VGLL4-205ENST00000417466 ZNF142P52746 1687 aaPredicted RBP35.65■■■■□ 3.3
VGLL4-205ENST00000417466 LRRC9Q6ZRR7 1453 aa35.63■■■■□ 3.29
VGLL4-205ENST00000417466 LTBP4Q8N2S1 1624 aa35.61■■■■□ 3.29
VGLL4-205ENST00000417466 CEP170BQ9Y4F5 1589 aaPredicted RBP35.6■■■■□ 3.29
VGLL4-205ENST00000417466 KIF3BO15066 747 aa35.6■■■■□ 3.29
VGLL4-205ENST00000417466 ARHGEF5Q12774 1597 aa35.59■■■■□ 3.29
VGLL4-205ENST00000417466 NCKAP5LQ9HCH0 1330 aa35.58■■■■□ 3.29
VGLL4-205ENST00000417466 PLA2R1Q13018 1463 aa35.54■■■■□ 3.28
VGLL4-205ENST00000417466 TSPY4P0CV99 314 aa35.52■■■■□ 3.28
VGLL4-205ENST00000417466 TSPY10P0CW01 314 aa35.52■■■■□ 3.28
VGLL4-205ENST00000417466 KANK4Q5T7N3 995 aaPredicted RBP35.52■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms