RNA–Protein interactions for RNA: ENST00000417295.6

SH3GL1-202, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 2 BASIC

Gene SH3GL1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-202ENST00000417295 SCAPERQ9BY12 1400 aa45.22■■■■■ 4.83
SH3GL1-202ENST00000417295 GPATCH8Q9UKJ3 1502 aaKnown RBP45.19■■■■■ 4.82
SH3GL1-202ENST00000417295 PREX2Q70Z35 1606 aa45.19■■■■■ 4.82
SH3GL1-202ENST00000417295 CDC42BPBQ9Y5S2 1711 aa45.18■■■■■ 4.82
SH3GL1-202ENST00000417295 CCNB3Q8WWL7 1395 aa45.14■■■■■ 4.82
SH3GL1-202ENST00000417295 CDC42BPAQ5VT25 1732 aa45.13■■■■■ 4.81
SH3GL1-202ENST00000417295 RICTORQ6R327 1708 aa45.12■■■■■ 4.81
SH3GL1-202ENST00000417295 MAP3K1Q13233 1512 aa45.12■■■■■ 4.81
SH3GL1-202ENST00000417295 KANK4Q5T7N3 995 aaPredicted RBP45.11■■■■■ 4.81
SH3GL1-202ENST00000417295 LRRC9Q6ZRR7 1453 aa45.11■■■■■ 4.81
SH3GL1-202ENST00000417295 POGZQ7Z3K3 1410 aa45.1■■■■■ 4.81
SH3GL1-202ENST00000417295 CFDP1Q9UEE9 299 aaPredicted RBP45.05■■■■■ 4.8
SH3GL1-202ENST00000417295 ZNF777Q9ULD5 760 aaPredicted RBP45.05■■■■■ 4.8
SH3GL1-202ENST00000417295 NCOA2Q15596 1464 aa45.03■■■■■ 4.8
SH3GL1-202ENST00000417295 KDM4FA0A1W2PPD8 638 aa45.01■■■■■ 4.8
SH3GL1-202ENST00000417295 AFAP1Q8N556 730 aa45.01■■■■■ 4.8
SH3GL1-202ENST00000417295 APLP2Q06481 763 aa45■■■■■ 4.79
SH3GL1-202ENST00000417295 ZMYM4Q5VZL5 1548 aa45■■■■■ 4.79
SH3GL1-202ENST00000417295 ARHGEF12Q9NZN5 1544 aa45■■■■■ 4.79
SH3GL1-202ENST00000417295 ABCC1P33527 1531 aa44.99■■■■■ 4.79
SH3GL1-202ENST00000417295 SUPT6HQ7KZ85 1726 aaKnown RBP44.97■■■■■ 4.79
SH3GL1-202ENST00000417295 ZNF518AQ6AHZ1 1483 aa44.95■■■■■ 4.79
SH3GL1-202ENST00000417295 SAMD9LQ8IVG5 1584 aa44.94■■■■■ 4.79
SH3GL1-202ENST00000417295 TRAPPC8Q9Y2L5 1435 aa44.94■■■■■ 4.78
SH3GL1-202ENST00000417295 YEATS2Q9ULM3 1422 aa44.93■■■■■ 4.78
SH3GL1-202ENST00000417295 MAGI2Q86UL8 1455 aa44.9■■■■■ 4.78
SH3GL1-202ENST00000417295 ARHGEF40Q8TER5 1519 aa44.88■■■■■ 4.78
SH3GL1-202ENST00000417295 ZNF644Q9H582 1327 aaPredicted RBP44.88■■■■■ 4.78
SH3GL1-202ENST00000417295 HNRNPMP52272 730 aaKnown RBP eCLIP44.87■■■■■ 4.772e-6■□□□□ 10.2
SH3GL1-202ENST00000417295 ZFYVE16Q7Z3T8 1539 aa44.87■■■■■ 4.77
SH3GL1-202ENST00000417295 KDM5CP41229 1560 aa44.86■■■■■ 4.77
SH3GL1-202ENST00000417295 AEBP2Q6ZN18 517 aaPredicted RBP44.85■■■■■ 4.77
SH3GL1-202ENST00000417295 SYCP2Q9BX26 1530 aa44.84■■■■■ 4.77
SH3GL1-202ENST00000417295 ITSN2Q9NZM3 1697 aa44.83■■■■■ 4.77
SH3GL1-202ENST00000417295 KIAA1107Q9UPP5 1409 aa44.82■■■■■ 4.77
SH3GL1-202ENST00000417295 PLEKHH2Q8IVE3 1493 aa44.8■■■■■ 4.76
SH3GL1-202ENST00000417295 MYT1LQ9UL68 1186 aa44.76■■■■■ 4.76
SH3GL1-202ENST00000417295 MLH3Q9UHC1 1453 aa44.73■■■■■ 4.75
SH3GL1-202ENST00000417295 ARID4BQ4LE39 1312 aaPredicted RBP44.73■■■■■ 4.75
SH3GL1-202ENST00000417295 HECW2Q9P2P5 1572 aa44.71■■■■■ 4.75
SH3GL1-202ENST00000417295 ATP10AO60312 1499 aa44.7■■■■■ 4.75
SH3GL1-202ENST00000417295 MBD5Q9P267 1494 aa44.68■■■■■ 4.74
SH3GL1-202ENST00000417295 CAMSAP2Q08AD1 1489 aa44.66■■■■■ 4.74
SH3GL1-202ENST00000417295 MYOM3Q5VTT5 1437 aa44.65■■■■■ 4.74
SH3GL1-202ENST00000417295 SPAG9O60271 1321 aaKnown RBP44.64■■■■■ 4.74
SH3GL1-202ENST00000417295 C9orf84Q5VXU9 1444 aa44.63■■■■■ 4.74
SH3GL1-202ENST00000417295 SIGLEC1Q9BZZ2 1709 aa44.6■■■■■ 4.73
SH3GL1-202ENST00000417295 DIP2CQ9Y2E4 1556 aa44.6■■■■■ 4.73
SH3GL1-202ENST00000417295 MIA2Q96PC5 1412 aa44.57■■■■■ 4.73
SH3GL1-202ENST00000417295 ABCA6Q8N139 1617 aa44.57■■■■■ 4.73
SH3GL1-202ENST00000417295 KIDINS220Q9ULH0 1771 aa44.56■■■■■ 4.72
SH3GL1-202ENST00000417295 BCORL1Q5H9F3 1711 aa44.51■■■■■ 4.72
SH3GL1-202ENST00000417295 ATP7AQ04656 1500 aa44.49■■■■■ 4.71
SH3GL1-202ENST00000417295 ADAMTSL3P82987 1691 aa44.48■■■■■ 4.71
SH3GL1-202ENST00000417295 CCDC141Q6ZP82 1450 aa44.48■■■■■ 4.71
SH3GL1-202ENST00000417295 MLECQ14165 292 aa44.48■■■■■ 4.71
SH3GL1-202ENST00000417295 RSPH4AQ5TD94 716 aa44.48■■■■■ 4.71
SH3GL1-202ENST00000417295 INO80Q9ULG1 1556 aaPredicted RBP44.47■■■■■ 4.71
SH3GL1-202ENST00000417295 REREQ9P2R6 1566 aa44.44■■■■■ 4.71
SH3GL1-202ENST00000417295 FGD6Q6ZV73 1430 aa44.41■■■■■ 4.7
SH3GL1-202ENST00000417295 ARHGEF5Q12774 1597 aa44.4■■■■■ 4.7
SH3GL1-202ENST00000417295 RTEL1-TNFRSF6BF6WH68 1400 aa44.4■■■■■ 4.7
SH3GL1-202ENST00000417295 PPARGC1BQ86YN6 1023 aaKnown RBP44.39■■■■■ 4.7
SH3GL1-202ENST00000417295 MADDQ8WXG6 1647 aa44.35■■■■■ 4.69
SH3GL1-202ENST00000417295 TSPY4P0CV99 314 aa44.34■■■■■ 4.69
SH3GL1-202ENST00000417295 TSPY10P0CW01 314 aa44.34■■■■■ 4.69
SH3GL1-202ENST00000417295 AGLP35573 1532 aa44.34■■■■■ 4.69
SH3GL1-202ENST00000417295 PTPN23Q9H3S7 1636 aa44.33■■■■■ 4.69
SH3GL1-202ENST00000417295 A2MP01023 1474 aa44.31■■■■■ 4.68
SH3GL1-202ENST00000417295 PTPRMP28827 1452 aa44.31■■■■■ 4.68
SH3GL1-202ENST00000417295 TCOF1Q13428 1488 aaKnown RBP44.29■■■■■ 4.68
SH3GL1-202ENST00000417295 PLXNC1O60486 1568 aa44.23■■■■■ 4.67
SH3GL1-202ENST00000417295 ABCC5O15440 1437 aa44.21■■■■■ 4.67
SH3GL1-202ENST00000417295 RIMS1Q86UR5 1692 aaKnown RBP44.19■■■■■ 4.67
SH3GL1-202ENST00000417295 DHX29Q7Z478 1369 aaKnown RBP44.19■■■■■ 4.66
SH3GL1-202ENST00000417295 ADGBQ8N7X0 1667 aa44.17■■■■■ 4.66
SH3GL1-202ENST00000417295 MAST1Q9Y2H9 1570 aa44.16■■■■■ 4.66
SH3GL1-202ENST00000417295 FAM50AQ14320 339 aaKnown RBP44.16■■■■■ 4.66
SH3GL1-202ENST00000417295 DAPK1P53355 1430 aa44.14■■■■■ 4.66
SH3GL1-202ENST00000417295 FER1L4A9Z1Z3 1794 aa44.12■■■■■ 4.65
SH3GL1-202ENST00000417295 PLPPR3Q6T4P5 718 aa44.11■■■■■ 4.65
SH3GL1-202ENST00000417295 DNMT1P26358 1616 aaKnown RBP44.08■■■■■ 4.65
SH3GL1-202ENST00000417295 SHANK2Q9UPX8 1470 aa44.07■■■■■ 4.65
SH3GL1-202ENST00000417295 GGT6Q6P531 493 aa44.07■■■■■ 4.64
SH3GL1-202ENST00000417295 KIF3BO15066 747 aa44.02■■■■■ 4.64
SH3GL1-202ENST00000417295 CEBPAP49715 358 aaPredicted RBP44.02■■■■■ 4.64
SH3GL1-202ENST00000417295 ESF1Q9H501 851 aaKnown RBP44.02■■■■■ 4.64
SH3GL1-202ENST00000417295 CROCC2H7BZ55 1655 aa44.01■■■■■ 4.64
SH3GL1-202ENST00000417295 CHIC2Q9UKJ5 165 aa44■■■■■ 4.63
SH3GL1-202ENST00000417295 RRP7BPQ9NSQ0 103 aa43.98■■■■■ 4.63
SH3GL1-202ENST00000417295 KIF15Q9NS87 1388 aa43.95■■■■■ 4.63
SH3GL1-202ENST00000417295 CNTLNQ9NXG0 1405 aa43.93■■■■■ 4.62
SH3GL1-202ENST00000417295 PPP6R1Q9UPN7 881 aa43.89■■■■■ 4.62
SH3GL1-202ENST00000417295 DUOX2Q9NRD8 1548 aa43.88■■■■■ 4.62
SH3GL1-202ENST00000417295 ANKRD30AQ9BXX3 1397 aa43.88■■■■■ 4.62
SH3GL1-202ENST00000417295 PTPRKQ15262 1439 aa43.85■■■■■ 4.61
SH3GL1-202ENST00000417295 NCOA1Q15788 1441 aa43.85■■■■■ 4.61
SH3GL1-202ENST00000417295 ZMYM3Q14202 1370 aa43.83■■■■■ 4.61
SH3GL1-202ENST00000417295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.82■■■■■ 4.616e-7■□□□□ 9.5
SH3GL1-202ENST00000417295 ADGRL2O95490 1459 aa43.81■■■■■ 4.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms