RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 MYO5CQ9NQX4 1742 aa25.4■■□□□ 1.66
CALD1-204ENST00000417172 RAB3GAP2Q9H2M9 1393 aa25.4■■□□□ 1.66
CALD1-204ENST00000417172 WDR7Q9Y4E6 1490 aa25.39■■□□□ 1.66
CALD1-204ENST00000417172 SETD5Q9C0A6 1442 aa25.38■■□□□ 1.65
CALD1-204ENST00000417172 CHIC2Q9UKJ5 165 aa25.37■■□□□ 1.65
CALD1-204ENST00000417172 ASXL2Q76L83 1435 aa25.37■■□□□ 1.65
CALD1-204ENST00000417172 CYB5RLQ6IPT4 315 aa25.37■■□□□ 1.65
CALD1-204ENST00000417172 DAPK1P53355 1430 aa25.36■■□□□ 1.65
CALD1-204ENST00000417172 ABCC5O15440 1437 aa25.35■■□□□ 1.65
CALD1-204ENST00000417172 SAMD9LQ8IVG5 1584 aa25.35■■□□□ 1.65
CALD1-204ENST00000417172 ARHGAP5Q13017 1502 aa25.32■■□□□ 1.64
CALD1-204ENST00000417172 CROCC2H7BZ55 1655 aa25.31■■□□□ 1.64
CALD1-204ENST00000417172 HFM1A2PYH4 1435 aa25.3■■□□□ 1.64
CALD1-204ENST00000417172 NPM1P06748 294 aaKnown RBP eCLIP25.3■■□□□ 1.64
CALD1-204ENST00000417172 RRP7BPQ9NSQ0 103 aa25.29■■□□□ 1.64
CALD1-204ENST00000417172 NAIPQ13075 1403 aa25.29■■□□□ 1.64
CALD1-204ENST00000417172 DHX57Q6P158 1386 aaKnown RBP25.29■■□□□ 1.64
CALD1-204ENST00000417172 GCC2Q8IWJ2 1684 aa25.28■■□□□ 1.64
CALD1-204ENST00000417172 ABCA9Q8IUA7 1624 aa25.26■■□□□ 1.63
CALD1-204ENST00000417172 KDM6BO15054 1643 aa25.25■■□□□ 1.63
CALD1-204ENST00000417172 PLCH2O75038 1416 aa25.25■■□□□ 1.63
CALD1-204ENST00000417172 HNRNPMP52272 730 aaKnown RBP eCLIP25.24■■□□□ 1.63
CALD1-204ENST00000417172 SYCP2Q9BX26 1530 aa25.23■■□□□ 1.63
CALD1-204ENST00000417172 ADGBQ8N7X0 1667 aa25.23■■□□□ 1.63
CALD1-204ENST00000417172 ZEB1P37275 1124 aaPredicted RBP25.23■■□□□ 1.63
CALD1-204ENST00000417172 AKNAQ7Z591 1439 aa25.22■■□□□ 1.63
CALD1-204ENST00000417172 MBD5Q9P267 1494 aa25.21■■□□□ 1.63
CALD1-204ENST00000417172 ARHGEF5Q12774 1597 aa25.2■■□□□ 1.62
CALD1-204ENST00000417172 ARHGEF12Q9NZN5 1544 aa25.16■■□□□ 1.62
CALD1-204ENST00000417172 ROCK1Q13464 1354 aa25.16■■□□□ 1.62
CALD1-204ENST00000417172 MAPKBP1O60336 1514 aa25.14■■□□□ 1.62
CALD1-204ENST00000417172 C9orf84Q5VXU9 1444 aa25.14■■□□□ 1.61
CALD1-204ENST00000417172 ABCC1P33527 1531 aa25.14■■□□□ 1.61
CALD1-204ENST00000417172 CCDC141Q6ZP82 1450 aa25.13■■□□□ 1.61
CALD1-204ENST00000417172 ARAP3Q8WWN8 1544 aa25.13■■□□□ 1.61
CALD1-204ENST00000417172 ADGRL2O95490 1459 aa25.13■■□□□ 1.61
CALD1-204ENST00000417172 SHANK2Q9UPX8 1470 aa25.13■■□□□ 1.61
CALD1-204ENST00000417172 EFCAB2Q5VUJ9 269 aa25.12■■□□□ 1.61
CALD1-204ENST00000417172 NCOA1Q15788 1441 aa25.12■■□□□ 1.61
CALD1-204ENST00000417172 FANCAO15360 1455 aa25.1■■□□□ 1.61
CALD1-204ENST00000417172 PLEKHH2Q8IVE3 1493 aa25.09■■□□□ 1.61
CALD1-204ENST00000417172 KIAA1107Q9UPP5 1409 aa25.09■■□□□ 1.61
CALD1-204ENST00000417172 TSPY4P0CV99 314 aa25.06■■□□□ 1.6
CALD1-204ENST00000417172 TSPY10P0CW01 314 aa25.06■■□□□ 1.6
CALD1-204ENST00000417172 ANKRD30AQ9BXX3 1397 aa25.06■■□□□ 1.6
CALD1-204ENST00000417172 TRAPPC8Q9Y2L5 1435 aa25.05■■□□□ 1.6
CALD1-204ENST00000417172 CD109Q6YHK3 1445 aa25.04■■□□□ 1.6
CALD1-204ENST00000417172 MAST1Q9Y2H9 1570 aa25.02■■□□□ 1.6
CALD1-204ENST00000417172 RSPH4AQ5TD94 716 aa25■■□□□ 1.59
CALD1-204ENST00000417172 CLSPNQ9HAW4 1339 aa25■■□□□ 1.59
CALD1-204ENST00000417172 ADGRL1O94910 1474 aa24.99■■□□□ 1.59
CALD1-204ENST00000417172 KIF15Q9NS87 1388 aa24.99■■□□□ 1.59
CALD1-204ENST00000417172 TRIM52Q96A61 297 aa24.99■■□□□ 1.59
CALD1-204ENST00000417172 MAP3K4Q9Y6R4 1608 aa24.99■■□□□ 1.59
CALD1-204ENST00000417172 DIP2BQ9P265 1576 aa24.98■■□□□ 1.59
CALD1-204ENST00000417172 AFAP1Q8N556 730 aa24.96■■□□□ 1.59
CALD1-204ENST00000417172 ANKRD50Q9ULJ7 1429 aa24.96■■□□□ 1.59
CALD1-204ENST00000417172 DENND4BO75064 1496 aaPredicted RBP24.96■■□□□ 1.59
CALD1-204ENST00000417172 SCAPERQ9BY12 1400 aa24.95■■□□□ 1.58
CALD1-204ENST00000417172 PLXNC1O60486 1568 aa24.94■■□□□ 1.58
CALD1-204ENST00000417172 CFAP74Q9C0B2 1584 aa24.94■■□□□ 1.58
CALD1-204ENST00000417172 GLI2P10070 1586 aa24.93■■□□□ 1.58
CALD1-204ENST00000417172 TSPOAP1O95153 1857 aa24.91■■□□□ 1.58
CALD1-204ENST00000417172 ZFYVE16Q7Z3T8 1539 aa24.91■■□□□ 1.58
CALD1-204ENST00000417172 FAM69CQ0P6D2 419 aa24.9■■□□□ 1.58
CALD1-204ENST00000417172 SIN3AQ96ST3 1273 aa24.89■■□□□ 1.58
CALD1-204ENST00000417172 INO80Q9ULG1 1556 aaPredicted RBP24.88■■□□□ 1.57
CALD1-204ENST00000417172 SPAG9O60271 1321 aaKnown RBP24.88■■□□□ 1.57
CALD1-204ENST00000417172 KIF13AQ9H1H9 1805 aa24.87■■□□□ 1.57
CALD1-204ENST00000417172 MPHOSPH9Q99550 1183 aa24.86■■□□□ 1.57
CALD1-204ENST00000417172 PZPP20742 1482 aa24.85■■□□□ 1.57
CALD1-204ENST00000417172 ATP7AQ04656 1500 aa24.85■■□□□ 1.57
CALD1-204ENST00000417172 FOXD1Q16676 465 aa24.84■■□□□ 1.57
CALD1-204ENST00000417172 PPRC1Q5VV67 1664 aaKnown RBP24.84■■□□□ 1.57
CALD1-204ENST00000417172 NEUROD1Q13562 356 aa24.83■■□□□ 1.57
CALD1-204ENST00000417172 NEO1Q92859 1461 aa24.82■■□□□ 1.56
CALD1-204ENST00000417172 DUOX2Q9NRD8 1548 aa24.82■■□□□ 1.56
CALD1-204ENST00000417172 KIDINS220Q9ULH0 1771 aa24.82■■□□□ 1.56
CALD1-204ENST00000417172 RTEL1-TNFRSF6BF6WH68 1400 aa24.81■■□□□ 1.56
CALD1-204ENST00000417172 ZNF518AQ6AHZ1 1483 aa24.81■■□□□ 1.56
CALD1-204ENST00000417172 POGZQ7Z3K3 1410 aa24.81■■□□□ 1.56
CALD1-204ENST00000417172 SLC4A1APQ9BWU0 796 aaKnown RBP24.79■■□□□ 1.56
CALD1-204ENST00000417172 KDM5CP41229 1560 aa24.78■■□□□ 1.56
CALD1-204ENST00000417172 MYT1LQ9UL68 1186 aa24.78■■□□□ 1.56
CALD1-204ENST00000417172 NUP155O75694 1391 aa24.77■■□□□ 1.56
CALD1-204ENST00000417172 UNC13BO14795 1591 aa24.76■■□□□ 1.55
CALD1-204ENST00000417172 RICTORQ6R327 1708 aa24.76■■□□□ 1.55
CALD1-204ENST00000417172 KDM5DQ9BY66 1539 aa24.75■■□□□ 1.55
CALD1-204ENST00000417172 RAPGEF3O95398 923 aa24.75■■□□□ 1.55
CALD1-204ENST00000417172 ERBINQ96RT1 1412 aa24.75■■□□□ 1.55
CALD1-204ENST00000417172 ACIN1Q9UKV3 1341 aaKnown RBP24.74■■□□□ 1.55
CALD1-204ENST00000417172 HECW2Q9P2P5 1572 aa24.73■■□□□ 1.55
CALD1-204ENST00000417172 FAM135AQ9P2D6 1515 aa24.7■■□□□ 1.55
CALD1-204ENST00000417172 FRMPD1Q5SYB0 1578 aa24.7■■□□□ 1.54
CALD1-204ENST00000417172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.7■■□□□ 1.542e-7■■■■□ 20.2
CALD1-204ENST00000417172 PKD2Q13563 968 aa24.69■■□□□ 1.54
CALD1-204ENST00000417172 ABCA6Q8N139 1617 aa24.68■■□□□ 1.54
CALD1-204ENST00000417172 ANKRD30BQ9BXX2 1392 aa24.68■■□□□ 1.54
CALD1-204ENST00000417172 MLH3Q9UHC1 1453 aa24.67■■□□□ 1.54
CALD1-204ENST00000417172 IQGAP3Q86VI3 1631 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms