RNA–Protein interactions for RNA: ENST00000415230.1

RAB9AP4-201, Transcript of RAB9A, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB9AP4, Length 609 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB9AP4-201ENST00000415230 PLCB2Q00722 1185 aa12.27□□□□□ -0.45
RAB9AP4-201ENST00000415230 TMEM92Q6UXU6 159 aa12.27□□□□□ -0.45
RAB9AP4-201ENST00000415230 G3V3G9 751 aa12.22□□□□□ -0.45
RAB9AP4-201ENST00000415230 GTPBP6O43824 516 aaPredicted RBP12.19□□□□□ -0.46
RAB9AP4-201ENST00000415230 MARVELD3Q96A59 401 aa12.16□□□□□ -0.46
RAB9AP4-201ENST00000415230 KIF3CO14782 793 aa12.11□□□□□ -0.47
RAB9AP4-201ENST00000415230 HOXB3P14651 431 aaPredicted RBP12.11□□□□□ -0.47
RAB9AP4-201ENST00000415230 BCANQ96GW7 911 aa12.1□□□□□ -0.47
RAB9AP4-201ENST00000415230 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
RAB9AP4-201ENST00000415230 C2orf72A6NCS6 295 aa12.07□□□□□ -0.48
RAB9AP4-201ENST00000415230 EMP3P54852 163 aa12.07□□□□□ -0.48
RAB9AP4-201ENST00000415230 POTEB3A0JP26 581 aa12.06□□□□□ -0.48
RAB9AP4-201ENST00000415230 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
RAB9AP4-201ENST00000415230 POTEBQ6S5H4 581 aa12.06□□□□□ -0.48
RAB9AP4-201ENST00000415230 SPNS2Q8IVW8 549 aa12.06□□□□□ -0.48
RAB9AP4-201ENST00000415230 RYDENQ9NUL5 291 aaKnown RBP12.04□□□□□ -0.48
RAB9AP4-201ENST00000415230 HS3ST6Q96QI5 342 aa12.02□□□□□ -0.49
RAB9AP4-201ENST00000415230 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
RAB9AP4-201ENST00000415230 MMRN1Q13201 1228 aa12.01□□□□□ -0.49
RAB9AP4-201ENST00000415230 DOK7Q18PE1 504 aa12□□□□□ -0.49
RAB9AP4-201ENST00000415230 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
RAB9AP4-201ENST00000415230 CADPS2Q86UW7 1296 aa11.98□□□□□ -0.49
RAB9AP4-201ENST00000415230 KRTAP3-3Q9BYR6 98 aa11.98□□□□□ -0.49
RAB9AP4-201ENST00000415230 KRTAP3-2Q9BYR7 98 aa11.98□□□□□ -0.49
RAB9AP4-201ENST00000415230 NCKAP5LQ9HCH0 1330 aa11.97□□□□□ -0.49
RAB9AP4-201ENST00000415230 TMC2Q8TDI7 906 aa11.96□□□□□ -0.49
RAB9AP4-201ENST00000415230 PRKCSHP14314 528 aaPredicted RBP11.95□□□□□ -0.5
RAB9AP4-201ENST00000415230 VSIG10Q8N0Z9 540 aa11.95□□□□□ -0.5
RAB9AP4-201ENST00000415230 CRISPLD2Q9H0B8 497 aa11.95□□□□□ -0.5
RAB9AP4-201ENST00000415230 GPHNQ9NQX3 736 aaPredicted RBP11.95□□□□□ -0.5
RAB9AP4-201ENST00000415230 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
RAB9AP4-201ENST00000415230 DSG2Q14126 1118 aa11.93□□□□□ -0.5
RAB9AP4-201ENST00000415230 PAXIP1Q6ZW49 1069 aaPredicted RBP11.92□□□□□ -0.5
RAB9AP4-201ENST00000415230 SPRYD3Q8NCJ5 442 aa11.92□□□□□ -0.5
RAB9AP4-201ENST00000415230 ZSWIM6Q9HCJ5 1215 aa11.92□□□□□ -0.5
RAB9AP4-201ENST00000415230 RIMBP2O15034 1052 aa11.9□□□□□ -0.5
RAB9AP4-201ENST00000415230 FOXK1P85037 733 aa11.9□□□□□ -0.5
RAB9AP4-201ENST00000415230 GPR153Q6NV75 609 aa11.9□□□□□ -0.5
RAB9AP4-201ENST00000415230 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
RAB9AP4-201ENST00000415230 KHSRPQ92945 711 aaKnown RBP eCLIP11.89□□□□□ -0.51
RAB9AP4-201ENST00000415230 PLPP6Q8IY26 295 aa11.88□□□□□ -0.51
RAB9AP4-201ENST00000415230 CFAP44Q96MT7 982 aa11.88□□□□□ -0.51
RAB9AP4-201ENST00000415230 ARSIQ5FYB1 569 aa11.86□□□□□ -0.51
RAB9AP4-201ENST00000415230 ERBB3P21860 1342 aa11.86□□□□□ -0.51
RAB9AP4-201ENST00000415230 SLC34A2O95436 690 aa11.84□□□□□ -0.51
RAB9AP4-201ENST00000415230 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
RAB9AP4-201ENST00000415230 PDE4AP27815 886 aa11.82□□□□□ -0.52
RAB9AP4-201ENST00000415230 MFSD10Q14728 455 aa11.82□□□□□ -0.52
RAB9AP4-201ENST00000415230 PPP1R15BQ5SWA1 713 aa11.82□□□□□ -0.52
RAB9AP4-201ENST00000415230 PCDHGA4Q9Y5G9 962 aa11.81□□□□□ -0.52
RAB9AP4-201ENST00000415230 VARS2Q5ST30 1063 aaKnown RBP11.78□□□□□ -0.52
RAB9AP4-201ENST00000415230 KDM4FA0A1W2PPD8 638 aa11.77□□□□□ -0.53
RAB9AP4-201ENST00000415230 ZNF687Q8N1G0 1237 aa11.77□□□□□ -0.53
RAB9AP4-201ENST00000415230 PTCD2Q8WV60 388 aaKnown RBP11.77□□□□□ -0.53
RAB9AP4-201ENST00000415230 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.53
RAB9AP4-201ENST00000415230 NUDT7P0C024 238 aa11.76□□□□□ -0.53
RAB9AP4-201ENST00000415230 OXER1Q8TDS5 423 aa11.75□□□□□ -0.53
RAB9AP4-201ENST00000415230 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
RAB9AP4-201ENST00000415230 TSHZ2Q9NRE2 1034 aa11.74□□□□□ -0.53
RAB9AP4-201ENST00000415230 UPF1Q92900 1129 aaKnown RBP eCLIP11.73□□□□□ -0.53
RAB9AP4-201ENST00000415230 EMILIN3Q9NT22 766 aa11.72□□□□□ -0.53
RAB9AP4-201ENST00000415230 ZNF316A6NFI3 1004 aaPredicted RBP11.7□□□□□ -0.54
RAB9AP4-201ENST00000415230 LHX6Q9UPM6 363 aa11.69□□□□□ -0.54
RAB9AP4-201ENST00000415230 KDM2AQ9Y2K7 1162 aa11.67□□□□□ -0.54
RAB9AP4-201ENST00000415230 CAMK2BQ13554 666 aa11.66□□□□□ -0.54
RAB9AP4-201ENST00000415230 TBC1D12O60347 775 aa11.61□□□□□ -0.55
RAB9AP4-201ENST00000415230 PTGER2P43116 358 aa11.6□□□□□ -0.55
RAB9AP4-201ENST00000415230 POTEEQ6S8J3 1075 aa11.6□□□□□ -0.55
RAB9AP4-201ENST00000415230 RNF166Q96A37 237 aaPredicted RBP11.59□□□□□ -0.55
RAB9AP4-201ENST00000415230 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
RAB9AP4-201ENST00000415230 DPYSL4O14531 572 aa11.57□□□□□ -0.56
RAB9AP4-201ENST00000415230 EVI5O60447 810 aa11.57□□□□□ -0.56
RAB9AP4-201ENST00000415230 ANO8Q9HCE9 1232 aaPredicted RBP11.57□□□□□ -0.56
RAB9AP4-201ENST00000415230 MAP3K9P80192 1104 aa11.55□□□□□ -0.56
RAB9AP4-201ENST00000415230 PBX2P40425 430 aa11.54□□□□□ -0.56
RAB9AP4-201ENST00000415230 LSM11P83369 360 aaKnown RBP eCLIP11.54□□□□□ -0.56
RAB9AP4-201ENST00000415230 E2F4Q16254 413 aa11.52□□□□□ -0.57
RAB9AP4-201ENST00000415230 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.57
RAB9AP4-201ENST00000415230 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
RAB9AP4-201ENST00000415230 FOSBP53539 338 aa11.5□□□□□ -0.57
RAB9AP4-201ENST00000415230 WDR70Q9NW82 654 aa11.5□□□□□ -0.57
RAB9AP4-201ENST00000415230 ZNF454Q8N9F8 522 aa11.48□□□□□ -0.57
RAB9AP4-201ENST00000415230 PSDA5PKW4 1024 aaPredicted RBP11.47□□□□□ -0.57
RAB9AP4-201ENST00000415230 PPP4R3BQ5MIZ7 849 aa11.47□□□□□ -0.57
RAB9AP4-201ENST00000415230 ARIH1Q9Y4X5 557 aaPredicted RBP11.47□□□□□ -0.57
RAB9AP4-201ENST00000415230 PSEN2P49810 448 aa11.45□□□□□ -0.58
RAB9AP4-201ENST00000415230 PDIA6Q15084 440 aa11.45□□□□□ -0.58
RAB9AP4-201ENST00000415230 JPH4Q96JJ6 628 aa11.45□□□□□ -0.58
RAB9AP4-201ENST00000415230 PCDHGA10Q9Y5H3 936 aa11.45□□□□□ -0.58
RAB9AP4-201ENST00000415230 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
RAB9AP4-201ENST00000415230 DMRTA1Q5VZB9 504 aa11.43□□□□□ -0.58
RAB9AP4-201ENST00000415230 ADAM33Q9BZ11 813 aa11.42□□□□□ -0.58
RAB9AP4-201ENST00000415230 ARHGAP33O14559 1287 aa11.41□□□□□ -0.58
RAB9AP4-201ENST00000415230 DDX12PQ92771 950 aa11.4□□□□□ -0.58
RAB9AP4-201ENST00000415230 BCL2L12Q9HB09 334 aa11.4□□□□□ -0.58
RAB9AP4-201ENST00000415230 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
RAB9AP4-201ENST00000415230 KCNK17Q96T54 332 aa11.39□□□□□ -0.59
RAB9AP4-201ENST00000415230 SPDYE16A6NNV3 312 aaPredicted RBP11.37□□□□□ -0.59
RAB9AP4-201ENST00000415230 PHF14O94880 888 aa11.37□□□□□ -0.59
RAB9AP4-201ENST00000415230 PRIM1P49642 420 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms