RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CCER2I3L3R5 266 aa11.01□□□□□ -0.65
PBRM1-209ENST00000412587 ZBTB7CA1YPR0 619 aa11.01□□□□□ -0.65
PBRM1-209ENST00000412587 POGKQ9P215 609 aa11.01□□□□□ -0.65
PBRM1-209ENST00000412587 FAM43AQ8N2R8 423 aa11□□□□□ -0.65
PBRM1-209ENST00000412587 GGT6Q6P531 493 aa11□□□□□ -0.65
PBRM1-209ENST00000412587 DCAF11Q8TEB1 546 aa10.99□□□□□ -0.65
PBRM1-209ENST00000412587 CFAP53Q96M91 514 aa10.99□□□□□ -0.65
PBRM1-209ENST00000412587 MSH5O43196 834 aa10.99□□□□□ -0.65
PBRM1-209ENST00000412587 FHOD3Q2V2M9 1422 aa10.98□□□□□ -0.65
PBRM1-209ENST00000412587 SETD5Q9C0A6 1442 aa10.98□□□□□ -0.65
PBRM1-209ENST00000412587 MSNP26038 577 aaKnown RBP10.97□□□□□ -0.65
PBRM1-209ENST00000412587 A0A0G2JS52 829 aa10.96□□□□□ -0.65
PBRM1-209ENST00000412587 PKD2Q13563 968 aa10.96□□□□□ -0.65
PBRM1-209ENST00000412587 BRPF3Q9ULD4 1205 aa10.96□□□□□ -0.66
PBRM1-209ENST00000412587 HDGFP51858 240 aaKnown RBP10.95□□□□□ -0.66
PBRM1-209ENST00000412587 HAP1P54257 671 aaPredicted RBP10.95□□□□□ -0.66
PBRM1-209ENST00000412587 NCAPD3P42695 1498 aa10.94□□□□□ -0.66
PBRM1-209ENST00000412587 DNTTIP2Q5QJE6 756 aaKnown RBP10.94□□□□□ -0.66
PBRM1-209ENST00000412587 ANKRD30AQ9BXX3 1397 aa10.93□□□□□ -0.66
PBRM1-209ENST00000412587 TCERG1O14776 1098 aaKnown RBP10.93□□□□□ -0.66
PBRM1-209ENST00000412587 RUSC2Q8N2Y8 1516 aa10.92□□□□□ -0.66
PBRM1-209ENST00000412587 GOLGA6L3A6NEY3 463 aa10.92□□□□□ -0.66
PBRM1-209ENST00000412587 NUP155O75694 1391 aa10.92□□□□□ -0.66
PBRM1-209ENST00000412587 TMF1P82094 1093 aa10.92□□□□□ -0.66
PBRM1-209ENST00000412587 FOXD1Q16676 465 aa10.92□□□□□ -0.66
PBRM1-209ENST00000412587 LMOD2Q6P5Q4 547 aa10.92□□□□□ -0.66
PBRM1-209ENST00000412587 MAP7D2Q96T17 732 aa10.91□□□□□ -0.66
PBRM1-209ENST00000412587 GOLGA6L22H0YM25 854 aa10.91□□□□□ -0.66
PBRM1-209ENST00000412587 PTMSP20962 102 aa10.91□□□□□ -0.66
PBRM1-209ENST00000412587 HNRNPMP52272 730 aaKnown RBP eCLIP10.91□□□□□ -0.66
PBRM1-209ENST00000412587 RSPH4AQ5TD94 716 aa10.9□□□□□ -0.66
PBRM1-209ENST00000412587 MPHOSPH9Q99550 1183 aa10.9□□□□□ -0.66
PBRM1-209ENST00000412587 PDIA4P13667 645 aaKnown RBP10.9□□□□□ -0.66
PBRM1-209ENST00000412587 CCDC18Q5T9S5 1454 aa10.9□□□□□ -0.66
PBRM1-209ENST00000412587 KIF3BO15066 747 aa10.9□□□□□ -0.67
PBRM1-209ENST00000412587 NUDCQ9Y266 331 aa10.9□□□□□ -0.67
PBRM1-209ENST00000412587 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
PBRM1-209ENST00000412587 FGD5Q6ZNL6 1462 aa10.89□□□□□ -0.67
PBRM1-209ENST00000412587 RAB3GAP2Q9H2M9 1393 aa10.89□□□□□ -0.67
PBRM1-209ENST00000412587 SPAG9O60271 1321 aaKnown RBP10.89□□□□□ -0.67
PBRM1-209ENST00000412587 PTPRGP23470 1445 aa10.88□□□□□ -0.67
PBRM1-209ENST00000412587 MYH16Q9H6N6 1097 aa10.88□□□□□ -0.67
PBRM1-209ENST00000412587 GAPVD1Q14C86 1478 aa10.88□□□□□ -0.67
PBRM1-209ENST00000412587 PTMAP06454 111 aaKnown RBP10.88□□□□□ -0.67
PBRM1-209ENST00000412587 TNNT3P45378 269 aaPredicted RBP10.88□□□□□ -0.67
PBRM1-209ENST00000412587 ARID3AQ99856 593 aa10.88□□□□□ -0.67
PBRM1-209ENST00000412587 IGF1RP08069 1367 aa10.87□□□□□ -0.67
PBRM1-209ENST00000412587 MAPK8IP3Q9UPT6 1336 aa10.87□□□□□ -0.67
PBRM1-209ENST00000412587 TPM2P07951 284 aa10.87□□□□□ -0.67
PBRM1-209ENST00000412587 OSCARQ8IYS5 282 aa10.87□□□□□ -0.67
PBRM1-209ENST00000412587 SRPK2P78362 688 aaKnown RBP10.87□□□□□ -0.67
PBRM1-209ENST00000412587 NEUROD2Q15784 382 aa10.87□□□□□ -0.67
PBRM1-209ENST00000412587 CC2D1BQ5T0F9 858 aaKnown RBP10.87□□□□□ -0.67
PBRM1-209ENST00000412587 SAFB2Q14151 953 aaKnown RBP eCLIP10.86□□□□□ -0.67
PBRM1-209ENST00000412587 RAD54L2Q9Y4B4 1467 aa10.86□□□□□ -0.67
PBRM1-209ENST00000412587 MTERF4Q7Z6M4 381 aaKnown RBP10.85□□□□□ -0.67
PBRM1-209ENST00000412587 PAK3O75914 559 aaPredicted RBP10.85□□□□□ -0.67
PBRM1-209ENST00000412587 STK26Q9P289 416 aa10.85□□□□□ -0.67
PBRM1-209ENST00000412587 CYB5RLQ6IPT4 315 aa10.84□□□□□ -0.67
PBRM1-209ENST00000412587 HSPA5P11021 654 aaKnown RBP10.84□□□□□ -0.67
PBRM1-209ENST00000412587 U2SURPO15042 1029 aaKnown RBP10.83□□□□□ -0.68
PBRM1-209ENST00000412587 RBM10P98175 930 aaKnown RBP10.83□□□□□ -0.68
PBRM1-209ENST00000412587 FRAT1Q92837 279 aaPredicted RBP10.82□□□□□ -0.68
PBRM1-209ENST00000412587 WASHC2CQ9Y4E1 1318 aa10.82□□□□□ -0.68
PBRM1-209ENST00000412587 CHAF1AQ13111 956 aaPredicted RBP10.81□□□□□ -0.68
PBRM1-209ENST00000412587 TAF7LQ5H9L4 462 aa10.8□□□□□ -0.68
PBRM1-209ENST00000412587 MORC1Q86VD1 984 aa10.8□□□□□ -0.68
PBRM1-209ENST00000412587 FAM13BQ9NYF5 915 aa10.8□□□□□ -0.68
PBRM1-209ENST00000412587 APPP05067 770 aa10.8□□□□□ -0.68
PBRM1-209ENST00000412587 NFKBIBQ15653 356 aa10.8□□□□□ -0.68
PBRM1-209ENST00000412587 AQRO60306 1485 aaKnown RBP eCLIP10.8□□□□□ -0.681e-6■■■□□ 17.7
PBRM1-209ENST00000412587 SOX12O15370 315 aa10.79□□□□□ -0.68
PBRM1-209ENST00000412587 ROCK2O75116 1388 aaKnown RBP10.79□□□□□ -0.68
PBRM1-209ENST00000412587 L3MBTL2Q969R5 705 aa10.78□□□□□ -0.68
PBRM1-209ENST00000412587 FTSJ3Q8IY81 847 aaKnown RBP10.78□□□□□ -0.68
PBRM1-209ENST00000412587 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.77□□□□□ -0.69
PBRM1-209ENST00000412587 HDGFL2Q7Z4V5 671 aaPredicted RBP10.77□□□□□ -0.69
PBRM1-209ENST00000412587 CFTRP13569 1480 aa10.77□□□□□ -0.69
PBRM1-209ENST00000412587 C11orf95C9JLR9 678 aaPredicted RBP10.77□□□□□ -0.69
PBRM1-209ENST00000412587 GZF1Q9H116 711 aaPredicted RBP10.77□□□□□ -0.69
PBRM1-209ENST00000412587 PDE4AP27815 886 aa10.76□□□□□ -0.69
PBRM1-209ENST00000412587 PDCL3Q9H2J4 239 aa10.76□□□□□ -0.69
PBRM1-209ENST00000412587 BBXQ8WY36 941 aaPredicted RBP10.76□□□□□ -0.69
PBRM1-209ENST00000412587 EID1Q9Y6B2 187 aa10.74□□□□□ -0.69
PBRM1-209ENST00000412587 NESP48681 1621 aa10.74□□□□□ -0.69
PBRM1-209ENST00000412587 KTN1Q86UP2 1357 aaKnown RBP10.73□□□□□ -0.69
PBRM1-209ENST00000412587 ZNF771Q7L3S4 317 aaPredicted RBP10.73□□□□□ -0.69
PBRM1-209ENST00000412587 GRIN2BQ13224 1484 aa10.73□□□□□ -0.69
PBRM1-209ENST00000412587 MS4A1P11836 297 aa10.73□□□□□ -0.69
PBRM1-209ENST00000412587 NUTM2DQ5VT03 806 aaPredicted RBP10.72□□□□□ -0.69
PBRM1-209ENST00000412587 EIF3AQ14152 1382 aaKnown RBP10.72□□□□□ -0.69
PBRM1-209ENST00000412587 TAF3Q5VWG9 929 aa10.72□□□□□ -0.69
PBRM1-209ENST00000412587 CC2D2AQ9P2K1 1620 aa10.71□□□□□ -0.69
PBRM1-209ENST00000412587 RGS3P49796 1198 aa10.71□□□□□ -0.69
PBRM1-209ENST00000412587 SLKQ9H2G2 1235 aaPredicted RBP10.71□□□□□ -0.69
PBRM1-209ENST00000412587 CCDC144AA2RUR9 1427 aa10.7□□□□□ -0.7
PBRM1-209ENST00000412587 KIAA2012Q0VF49 1180 aa10.7□□□□□ -0.7
PBRM1-209ENST00000412587 HMGXB3Q12766 1538 aa10.69□□□□□ -0.7
PBRM1-209ENST00000412587 GBP4Q96PP9 640 aa10.69□□□□□ -0.7
PBRM1-209ENST00000412587 CHMP4BQ9H444 224 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms