RNA–Protein interactions for RNA: ENST00000412227.6

CROT-202, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 1 (best) BASIC

Gene CROT, Length 1,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-202ENST00000412227 TROQ12816 1431 aaPredicted RBP35.96■■■■□ 3.35
CROT-202ENST00000412227 YEATS2Q9ULM3 1422 aa35.96■■■■□ 3.35
CROT-202ENST00000412227 MAGI2Q86UL8 1455 aa35.96■■■■□ 3.35
CROT-202ENST00000412227 RIMS1Q86UR5 1692 aaKnown RBP35.94■■■■□ 3.34
CROT-202ENST00000412227 ILDR1Q86SU0 546 aaPredicted RBP35.94■■■■□ 3.34
CROT-202ENST00000412227 CLIP1P30622 1438 aa35.93■■■■□ 3.34
CROT-202ENST00000412227 POGZQ7Z3K3 1410 aa35.93■■■■□ 3.34
CROT-202ENST00000412227 SIGLEC1Q9BZZ2 1709 aa35.89■■■■□ 3.34
CROT-202ENST00000412227 PCF11O94913 1555 aaKnown RBP35.86■■■■□ 3.33
CROT-202ENST00000412227 ARHGAP5Q13017 1502 aa35.86■■■■□ 3.33
CROT-202ENST00000412227 CASKIN1Q8WXD9 1431 aa35.84■■■■□ 3.33
CROT-202ENST00000412227 CCDC18Q5T9S5 1454 aa35.81■■■■□ 3.32
CROT-202ENST00000412227 CDC42BPBQ9Y5S2 1711 aa35.8■■■■□ 3.32
CROT-202ENST00000412227 MLECQ14165 292 aa35.79■■■■□ 3.32
CROT-202ENST00000412227 ATP10AO60312 1499 aa35.78■■■■□ 3.32
CROT-202ENST00000412227 ZNF518AQ6AHZ1 1483 aa35.77■■■■□ 3.32
CROT-202ENST00000412227 FER1L4A9Z1Z3 1794 aa35.76■■■■□ 3.32
CROT-202ENST00000412227 PLPPR3Q6T4P5 718 aa35.76■■■■□ 3.32
CROT-202ENST00000412227 C9orf84Q5VXU9 1444 aa35.74■■■■□ 3.31
CROT-202ENST00000412227 AFAP1Q8N556 730 aa35.72■■■■□ 3.31
CROT-202ENST00000412227 LMTK3Q96Q04 1460 aa35.72■■■■□ 3.31
CROT-202ENST00000412227 PREX2Q70Z35 1606 aa35.72■■■■□ 3.31
CROT-202ENST00000412227 FYCO1Q9BQS8 1478 aa35.71■■■■□ 3.31
CROT-202ENST00000412227 KDM5CP41229 1560 aa35.7■■■■□ 3.31
CROT-202ENST00000412227 MYT1LQ9UL68 1186 aa35.7■■■■□ 3.31
CROT-202ENST00000412227 CDC42BPAQ5VT25 1732 aa35.64■■■■□ 3.3
CROT-202ENST00000412227 ARHGEF12Q9NZN5 1544 aa35.62■■■■□ 3.29
CROT-202ENST00000412227 ITSN2Q9NZM3 1697 aa35.6■■■■□ 3.29
CROT-202ENST00000412227 ABCC1P33527 1531 aa35.6■■■■□ 3.29
CROT-202ENST00000412227 DIP2CQ9Y2E4 1556 aa35.59■■■■□ 3.29
CROT-202ENST00000412227 MLH3Q9UHC1 1453 aa35.56■■■■□ 3.28
CROT-202ENST00000412227 HSPA2P54652 639 aa35.56■■■■□ 3.28
CROT-202ENST00000412227 TRAPPC8Q9Y2L5 1435 aa35.56■■■■□ 3.28
CROT-202ENST00000412227 ABCA6Q8N139 1617 aa35.54■■■■□ 3.28
CROT-202ENST00000412227 REREQ9P2R6 1566 aa35.51■■■■□ 3.28
CROT-202ENST00000412227 ZNF777Q9ULD5 760 aaPredicted RBP35.5■■■■□ 3.27
CROT-202ENST00000412227 CEBPAP49715 358 aaPredicted RBP35.47■■■■□ 3.27
CROT-202ENST00000412227 KIDINS220Q9ULH0 1771 aa35.46■■■■□ 3.27
CROT-202ENST00000412227 GPATCH8Q9UKJ3 1502 aaKnown RBP35.45■■■■□ 3.27
CROT-202ENST00000412227 PREX1Q8TCU6 1659 aa35.44■■■■□ 3.26
CROT-202ENST00000412227 SAMD9LQ8IVG5 1584 aa35.44■■■■□ 3.26
CROT-202ENST00000412227 FBXO41Q8TF61 875 aa35.43■■■■□ 3.26
CROT-202ENST00000412227 SETD1BQ9UPS6 1966 aaKnown RBP35.42■■■■□ 3.26
CROT-202ENST00000412227 AGLP35573 1532 aa35.41■■■■□ 3.26
CROT-202ENST00000412227 SYCP2Q9BX26 1530 aa35.39■■■■□ 3.26
CROT-202ENST00000412227 MTUS2Q5JR59 1369 aa35.38■■■■□ 3.26
CROT-202ENST00000412227 CCNB3Q8WWL7 1395 aa35.37■■■■□ 3.25
CROT-202ENST00000412227 HNRNPMP52272 730 aaKnown RBP eCLIP35.36■■■■□ 3.25
CROT-202ENST00000412227 ESF1Q9H501 851 aaKnown RBP35.36■■■■□ 3.25
CROT-202ENST00000412227 CFDP1Q9UEE9 299 aaPredicted RBP35.36■■■■□ 3.25
CROT-202ENST00000412227 C3P01024 1663 aa35.33■■■■□ 3.25
CROT-202ENST00000412227 SPAG9O60271 1321 aaKnown RBP35.32■■■■□ 3.25
CROT-202ENST00000412227 PLEKHH2Q8IVE3 1493 aa35.3■■■■□ 3.24
CROT-202ENST00000412227 CEP162Q5TB80 1403 aa35.29■■■■□ 3.24
CROT-202ENST00000412227 KIAA1107Q9UPP5 1409 aa35.29■■■■□ 3.24
CROT-202ENST00000412227 UHRF1BP1Q6BDS2 1440 aa35.27■■■■□ 3.24
CROT-202ENST00000412227 SUPT6HQ7KZ85 1726 aaKnown RBP35.26■■■■□ 3.23
CROT-202ENST00000412227 ATP7AQ04656 1500 aa35.24■■■■□ 3.23
CROT-202ENST00000412227 EHBP1L1Q8N3D4 1523 aa35.24■■■■□ 3.23
CROT-202ENST00000412227 CNTLNQ9NXG0 1405 aa35.22■■■■□ 3.23
CROT-202ENST00000412227 TIAM1Q13009 1591 aa35.21■■■■□ 3.23
CROT-202ENST00000412227 INO80Q9ULG1 1556 aaPredicted RBP35.21■■■■□ 3.23
CROT-202ENST00000412227 STRCQ7RTU9 1775 aa35.19■■■■□ 3.22
CROT-202ENST00000412227 ZNF644Q9H582 1327 aaPredicted RBP35.15■■■■□ 3.22
CROT-202ENST00000412227 MROH2AA6NES4 1674 aa35.14■■■■□ 3.22
CROT-202ENST00000412227 DMRT2Q9Y5R5 561 aa35.14■■■■□ 3.22
CROT-202ENST00000412227 A2MP01023 1474 aa35.14■■■■□ 3.22
CROT-202ENST00000412227 CERKQ8TCT0 537 aa35.12■■■■□ 3.21
CROT-202ENST00000412227 PLXNC1O60486 1568 aa35.11■■■■□ 3.21
CROT-202ENST00000412227 ADGBQ8N7X0 1667 aa35.1■■■■□ 3.21
CROT-202ENST00000412227 CLTCQ00610 1675 aaKnown RBP35.07■■■■□ 3.2
CROT-202ENST00000412227 MBD5Q9P267 1494 aa35.06■■■■□ 3.2
CROT-202ENST00000412227 ZMYM3Q14202 1370 aa35.06■■■■□ 3.2
CROT-202ENST00000412227 GGT6Q6P531 493 aa35.04■■■■□ 3.2
CROT-202ENST00000412227 NPATQ14207 1427 aa35.02■■■■□ 3.2
CROT-202ENST00000412227 NCOA2Q15596 1464 aa35.02■■■■□ 3.2
CROT-202ENST00000412227 LOC105371045A0A1W2PR82 267 aa35■■■■□ 3.19
CROT-202ENST00000412227 RTEL1-TNFRSF6BF6WH68 1400 aa34.99■■■■□ 3.19
CROT-202ENST00000412227 PTPRTO14522 1441 aa34.96■■■■□ 3.19
CROT-202ENST00000412227 CAMSAP2Q08AD1 1489 aa34.95■■■■□ 3.19
CROT-202ENST00000412227 PPP6R1Q9UPN7 881 aa34.93■■■■□ 3.18
CROT-202ENST00000412227 CCDC141Q6ZP82 1450 aa34.92■■■■□ 3.18
CROT-202ENST00000412227 VPS8Q8N3P4 1428 aa34.92■■■■□ 3.18
CROT-202ENST00000412227 NCOA1Q15788 1441 aa34.91■■■■□ 3.18
CROT-202ENST00000412227 DHX29Q7Z478 1369 aaKnown RBP34.91■■■■□ 3.18
CROT-202ENST00000412227 RSPH4AQ5TD94 716 aa34.9■■■■□ 3.18
CROT-202ENST00000412227 CAMSAP1Q5T5Y3 1602 aa34.89■■■■□ 3.18
CROT-202ENST00000412227 PTPRKQ15262 1439 aa34.88■■■■□ 3.17
CROT-202ENST00000412227 MYO3AQ8NEV4 1616 aa34.86■■■■□ 3.17
CROT-202ENST00000412227 LRRC9Q6ZRR7 1453 aa34.85■■■■□ 3.17
CROT-202ENST00000412227 ZNF142P52746 1687 aaPredicted RBP34.85■■■■□ 3.17
CROT-202ENST00000412227 KIF3BO15066 747 aa34.82■■■■□ 3.16
CROT-202ENST00000412227 ARHGEF5Q12774 1597 aa34.81■■■■□ 3.16
CROT-202ENST00000412227 CEP170BQ9Y4F5 1589 aaPredicted RBP34.79■■■■□ 3.16
CROT-202ENST00000412227 TSPY4P0CV99 314 aa34.79■■■■□ 3.16
CROT-202ENST00000412227 TSPY10P0CW01 314 aa34.79■■■■□ 3.16
CROT-202ENST00000412227 NCKAP5LQ9HCH0 1330 aa34.77■■■■□ 3.16
CROT-202ENST00000412227 MAP3K1Q13233 1512 aa34.75■■■■□ 3.15
CROT-202ENST00000412227 KANK4Q5T7N3 995 aaPredicted RBP34.74■■■■□ 3.15
CROT-202ENST00000412227 LTBP4Q8N2S1 1624 aa34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms