RNA–Protein interactions for RNA: ENST00000411549.5

ACAA1-203, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 1 (best)

Gene ACAA1, Length 1,944 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-203ENST00000411549 CD109Q6YHK3 1445 aa29.56■■■□□ 2.32
ACAA1-203ENST00000411549 TSPOAP1O95153 1857 aa29.55■■■□□ 2.32
ACAA1-203ENST00000411549 CDC42BPAQ5VT25 1732 aa29.54■■■□□ 2.32
ACAA1-203ENST00000411549 ITGAEP38570 1179 aa29.52■■■□□ 2.32
ACAA1-203ENST00000411549 PREX2Q70Z35 1606 aa29.51■■■□□ 2.32
ACAA1-203ENST00000411549 RAB3GAP2Q9H2M9 1393 aa29.51■■■□□ 2.31
ACAA1-203ENST00000411549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.51■■■□□ 2.31
ACAA1-203ENST00000411549 ITSN2Q9NZM3 1697 aa29.5■■■□□ 2.31
ACAA1-203ENST00000411549 PPRC1Q5VV67 1664 aaKnown RBP29.5■■■□□ 2.31
ACAA1-203ENST00000411549 CDC42BPBQ9Y5S2 1711 aa29.48■■■□□ 2.31
ACAA1-203ENST00000411549 PLCH2O75038 1416 aa29.48■■■□□ 2.31
ACAA1-203ENST00000411549 SETD5Q9C0A6 1442 aa29.48■■■□□ 2.31
ACAA1-203ENST00000411549 ARAP3Q8WWN8 1544 aa29.48■■■□□ 2.31
ACAA1-203ENST00000411549 GPATCH8Q9UKJ3 1502 aaKnown RBP29.48■■■□□ 2.31
ACAA1-203ENST00000411549 TEX14Q8IWB6 1497 aa29.43■■■□□ 2.3
ACAA1-203ENST00000411549 ARHGAP5Q13017 1502 aa29.43■■■□□ 2.3
ACAA1-203ENST00000411549 FAM50AQ14320 339 aaKnown RBP29.42■■■□□ 2.3
ACAA1-203ENST00000411549 CFAP74Q9C0B2 1584 aa29.41■■■□□ 2.3
ACAA1-203ENST00000411549 MYOM3Q5VTT5 1437 aa29.41■■■□□ 2.3
ACAA1-203ENST00000411549 FANCAO15360 1455 aa29.39■■■□□ 2.3
ACAA1-203ENST00000411549 FGD6Q6ZV73 1430 aa29.38■■■□□ 2.29
ACAA1-203ENST00000411549 CFDP1Q9UEE9 299 aaPredicted RBP29.36■■■□□ 2.29
ACAA1-203ENST00000411549 NEO1Q92859 1461 aa29.35■■■□□ 2.29
ACAA1-203ENST00000411549 EFCAB2Q5VUJ9 269 aa29.35■■■□□ 2.29
ACAA1-203ENST00000411549 MIA2Q96PC5 1412 aa29.33■■■□□ 2.29
ACAA1-203ENST00000411549 SAMD9LQ8IVG5 1584 aa29.3■■■□□ 2.28
ACAA1-203ENST00000411549 AKNAQ7Z591 1439 aa29.29■■■□□ 2.28
ACAA1-203ENST00000411549 ZNF777Q9ULD5 760 aaPredicted RBP29.28■■■□□ 2.28
ACAA1-203ENST00000411549 PTPN23Q9H3S7 1636 aa29.26■■■□□ 2.28
ACAA1-203ENST00000411549 ADGRL1O94910 1474 aa29.25■■■□□ 2.27
ACAA1-203ENST00000411549 ABCC1P33527 1531 aa29.25■■■□□ 2.27
ACAA1-203ENST00000411549 CAMSAP2Q08AD1 1489 aa29.24■■■□□ 2.27
ACAA1-203ENST00000411549 SCAF1Q9H7N4 1312 aaKnown RBP29.24■■■□□ 2.27
ACAA1-203ENST00000411549 ACIN1Q9UKV3 1341 aaKnown RBP29.23■■■□□ 2.27
ACAA1-203ENST00000411549 PLEKHH2Q8IVE3 1493 aa29.23■■■□□ 2.27
ACAA1-203ENST00000411549 ZNF644Q9H582 1327 aaPredicted RBP29.21■■■□□ 2.27
ACAA1-203ENST00000411549 TCOF1Q13428 1488 aaKnown RBP29.2■■■□□ 2.27
ACAA1-203ENST00000411549 SYCP2Q9BX26 1530 aa29.19■■■□□ 2.26
ACAA1-203ENST00000411549 SCAPERQ9BY12 1400 aa29.19■■■□□ 2.26
ACAA1-203ENST00000411549 KIAA1107Q9UPP5 1409 aa29.19■■■□□ 2.26
ACAA1-203ENST00000411549 KDM6BO15054 1643 aa29.16■■■□□ 2.26
ACAA1-203ENST00000411549 MIER1Q8N108 512 aa29.16■■■□□ 2.26
ACAA1-203ENST00000411549 ARHGEF12Q9NZN5 1544 aa29.16■■■□□ 2.26
ACAA1-203ENST00000411549 NEUROD1Q13562 356 aa29.16■■■□□ 2.26
ACAA1-203ENST00000411549 PTPRKQ15262 1439 aa29.15■■■□□ 2.26
ACAA1-203ENST00000411549 CENPBP07199 599 aaPredicted RBP29.15■■■□□ 2.26
ACAA1-203ENST00000411549 DENND4BO75064 1496 aaPredicted RBP29.15■■■□□ 2.26
ACAA1-203ENST00000411549 RICTORQ6R327 1708 aa29.13■■■□□ 2.25
ACAA1-203ENST00000411549 HFM1A2PYH4 1435 aa29.13■■■□□ 2.25
ACAA1-203ENST00000411549 COL17A1Q9UMD9 1497 aaPredicted RBP29.12■■■□□ 2.25
ACAA1-203ENST00000411549 MBD5Q9P267 1494 aa29.12■■■□□ 2.25
ACAA1-203ENST00000411549 POGZQ7Z3K3 1410 aa29.12■■■□□ 2.25
ACAA1-203ENST00000411549 ARHGEF5Q12774 1597 aa29.11■■■□□ 2.25
ACAA1-203ENST00000411549 HNRNPMP52272 730 aaKnown RBP eCLIP29.11■■■□□ 2.25
ACAA1-203ENST00000411549 ZNF518AQ6AHZ1 1483 aa29.1■■■□□ 2.25
ACAA1-203ENST00000411549 FRMPD1Q5SYB0 1578 aa29.09■■■□□ 2.25
ACAA1-203ENST00000411549 TRAPPC8Q9Y2L5 1435 aa29.09■■■□□ 2.25
ACAA1-203ENST00000411549 DNMT1P26358 1616 aaKnown RBP29.07■■■□□ 2.24
ACAA1-203ENST00000411549 CCDC141Q6ZP82 1450 aa29.06■■■□□ 2.24
ACAA1-203ENST00000411549 RAPGEF3O95398 923 aa29.06■■■□□ 2.24
ACAA1-203ENST00000411549 KDM5CP41229 1560 aa29.05■■■□□ 2.24
ACAA1-203ENST00000411549 RSPH4AQ5TD94 716 aa29.05■■■□□ 2.24
ACAA1-203ENST00000411549 TIMELESSQ9UNS1 1208 aa29.04■■■□□ 2.24
ACAA1-203ENST00000411549 CROCC2H7BZ55 1655 aa29.03■■■□□ 2.24
ACAA1-203ENST00000411549 NAIPQ13075 1403 aa29.03■■■□□ 2.24
ACAA1-203ENST00000411549 AFAP1Q8N556 730 aa29.02■■■□□ 2.24
ACAA1-203ENST00000411549 ZMYM4Q5VZL5 1548 aa29.01■■■□□ 2.23
ACAA1-203ENST00000411549 DAPK1P53355 1430 aa29■■■□□ 2.23
ACAA1-203ENST00000411549 SIN3AQ96ST3 1273 aa29■■■□□ 2.23
ACAA1-203ENST00000411549 ABCC5O15440 1437 aa28.98■■■□□ 2.23
ACAA1-203ENST00000411549 HECW2Q9P2P5 1572 aa28.98■■■□□ 2.23
ACAA1-203ENST00000411549 SHANK2Q9UPX8 1470 aa28.95■■■□□ 2.23
ACAA1-203ENST00000411549 INO80Q9ULG1 1556 aaPredicted RBP28.95■■■□□ 2.22
ACAA1-203ENST00000411549 MAST1Q9Y2H9 1570 aa28.95■■■□□ 2.22
ACAA1-203ENST00000411549 MLH3Q9UHC1 1453 aa28.94■■■□□ 2.22
ACAA1-203ENST00000411549 TSPY4P0CV99 314 aa28.94■■■□□ 2.22
ACAA1-203ENST00000411549 TSPY10P0CW01 314 aa28.94■■■□□ 2.22
ACAA1-203ENST00000411549 SPAG9O60271 1321 aaKnown RBP28.94■■■□□ 2.22
ACAA1-203ENST00000411549 MAGI2Q86UL8 1455 aa28.93■■■□□ 2.22
ACAA1-203ENST00000411549 ZFYVE16Q7Z3T8 1539 aa28.93■■■□□ 2.22
ACAA1-203ENST00000411549 KIDINS220Q9ULH0 1771 aa28.93■■■□□ 2.22
ACAA1-203ENST00000411549 ATP7AQ04656 1500 aa28.92■■■□□ 2.22
ACAA1-203ENST00000411549 C9orf84Q5VXU9 1444 aa28.91■■■□□ 2.22
ACAA1-203ENST00000411549 RTEL1-TNFRSF6BF6WH68 1400 aa28.91■■■□□ 2.22
ACAA1-203ENST00000411549 ADGBQ8N7X0 1667 aa28.88■■■□□ 2.21
ACAA1-203ENST00000411549 GCC2Q8IWJ2 1684 aa28.88■■■□□ 2.21
ACAA1-203ENST00000411549 MYT1LQ9UL68 1186 aa28.88■■■□□ 2.21
ACAA1-203ENST00000411549 ARHGEF40Q8TER5 1519 aa28.86■■■□□ 2.21
ACAA1-203ENST00000411549 ABCA6Q8N139 1617 aa28.85■■■□□ 2.21
ACAA1-203ENST00000411549 YEATS2Q9ULM3 1422 aa28.84■■■□□ 2.21
ACAA1-203ENST00000411549 PLXNC1O60486 1568 aa28.84■■■□□ 2.21
ACAA1-203ENST00000411549 ADGRL2O95490 1459 aa28.83■■■□□ 2.21
ACAA1-203ENST00000411549 CHIC2Q9UKJ5 165 aa28.82■■■□□ 2.2
ACAA1-203ENST00000411549 DIP2CQ9Y2E4 1556 aa28.82■■■□□ 2.2
ACAA1-203ENST00000411549 PPP1R15AO75807 674 aaPredicted RBP28.82■■■□□ 2.2
ACAA1-203ENST00000411549 YTHDC1Q96MU7 727 aaKnown RBP28.82■■■□□ 2.2
ACAA1-203ENST00000411549 ANKRD30AQ9BXX3 1397 aa28.79■■■□□ 2.2
ACAA1-203ENST00000411549 ROCK1Q13464 1354 aa28.77■■■□□ 2.2
ACAA1-203ENST00000411549 GTF3C3Q9Y5Q9 886 aa28.77■■■□□ 2.2
ACAA1-203ENST00000411549 NCOA1Q15788 1441 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms