RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.68■■■□□ 2.18
LMO2-203ENST00000411482 KIF14Q15058 1648 aa28.65■■■□□ 2.18
LMO2-203ENST00000411482 TTC37Q6PGP7 1564 aa28.63■■■□□ 2.17
LMO2-203ENST00000411482 FAM50AQ14320 339 aaKnown RBP28.61■■■□□ 2.17
LMO2-203ENST00000411482 SETD5Q9C0A6 1442 aa28.61■■■□□ 2.17
LMO2-203ENST00000411482 RAB3GAP2Q9H2M9 1393 aa28.56■■■□□ 2.16
LMO2-203ENST00000411482 TCOF1Q13428 1488 aaKnown RBP28.55■■■□□ 2.16
LMO2-203ENST00000411482 TEX14Q8IWB6 1497 aa28.55■■■□□ 2.16
LMO2-203ENST00000411482 ITGAEP38570 1179 aa28.54■■■□□ 2.16
LMO2-203ENST00000411482 MIA2Q96PC5 1412 aa28.53■■■□□ 2.16
LMO2-203ENST00000411482 COL17A1Q9UMD9 1497 aaPredicted RBP28.51■■■□□ 2.15
LMO2-203ENST00000411482 PLCH2O75038 1416 aa28.5■■■□□ 2.15
LMO2-203ENST00000411482 PTPN23Q9H3S7 1636 aa28.49■■■□□ 2.15
LMO2-203ENST00000411482 MYO5CQ9NQX4 1742 aa28.48■■■□□ 2.15
LMO2-203ENST00000411482 KDM6BO15054 1643 aa28.44■■■□□ 2.14
LMO2-203ENST00000411482 PTPRKQ15262 1439 aa28.44■■■□□ 2.14
LMO2-203ENST00000411482 CDC42BPBQ9Y5S2 1711 aa28.44■■■□□ 2.14
LMO2-203ENST00000411482 NEO1Q92859 1461 aa28.44■■■□□ 2.14
LMO2-203ENST00000411482 ARAP3Q8WWN8 1544 aa28.44■■■□□ 2.14
LMO2-203ENST00000411482 CDC42BPAQ5VT25 1732 aa28.43■■■□□ 2.14
LMO2-203ENST00000411482 FANCAO15360 1455 aa28.42■■■□□ 2.14
LMO2-203ENST00000411482 HFM1A2PYH4 1435 aa28.41■■■□□ 2.14
LMO2-203ENST00000411482 GPATCH8Q9UKJ3 1502 aaKnown RBP28.39■■■□□ 2.14
LMO2-203ENST00000411482 PREX2Q70Z35 1606 aa28.38■■■□□ 2.13
LMO2-203ENST00000411482 AKNAQ7Z591 1439 aa28.38■■■□□ 2.13
LMO2-203ENST00000411482 EFCAB2Q5VUJ9 269 aa28.37■■■□□ 2.13
LMO2-203ENST00000411482 CFAP74Q9C0B2 1584 aa28.35■■■□□ 2.13
LMO2-203ENST00000411482 ARHGAP5Q13017 1502 aa28.33■■■□□ 2.13
LMO2-203ENST00000411482 NAIPQ13075 1403 aa28.31■■■□□ 2.12
LMO2-203ENST00000411482 RAPGEF3O95398 923 aa28.28■■■□□ 2.12
LMO2-203ENST00000411482 ADGRL1O94910 1474 aa28.26■■■□□ 2.11
LMO2-203ENST00000411482 FRMPD1Q5SYB0 1578 aa28.26■■■□□ 2.11
LMO2-203ENST00000411482 SCAPERQ9BY12 1400 aa28.25■■■□□ 2.11
LMO2-203ENST00000411482 CFDP1Q9UEE9 299 aaPredicted RBP28.25■■■□□ 2.11
LMO2-203ENST00000411482 RICTORQ6R327 1708 aa28.25■■■□□ 2.11
LMO2-203ENST00000411482 DENND4BO75064 1496 aaPredicted RBP28.24■■■□□ 2.11
LMO2-203ENST00000411482 ITSN2Q9NZM3 1697 aa28.23■■■□□ 2.11
LMO2-203ENST00000411482 SAMD9LQ8IVG5 1584 aa28.23■■■□□ 2.11
LMO2-203ENST00000411482 ARHGEF12Q9NZN5 1544 aa28.23■■■□□ 2.11
LMO2-203ENST00000411482 ZNF316A6NFI3 1004 aaPredicted RBP28.23■■■□□ 2.11
LMO2-203ENST00000411482 ZNF777Q9ULD5 760 aaPredicted RBP28.2■■■□□ 2.1
LMO2-203ENST00000411482 ZNF644Q9H582 1327 aaPredicted RBP28.2■■■□□ 2.1
LMO2-203ENST00000411482 ABCC1P33527 1531 aa28.2■■■□□ 2.1
LMO2-203ENST00000411482 ROCK1Q13464 1354 aa28.2■■■□□ 2.1
LMO2-203ENST00000411482 GCC2Q8IWJ2 1684 aa28.19■■■□□ 2.1
LMO2-203ENST00000411482 DNMT1P26358 1616 aaKnown RBP28.18■■■□□ 2.1
LMO2-203ENST00000411482 POGZQ7Z3K3 1410 aa28.16■■■□□ 2.1
LMO2-203ENST00000411482 DAPK1P53355 1430 aa28.16■■■□□ 2.1
LMO2-203ENST00000411482 TIMELESSQ9UNS1 1208 aa28.15■■■□□ 2.1
LMO2-203ENST00000411482 ACIN1Q9UKV3 1341 aaKnown RBP28.15■■■□□ 2.1
LMO2-203ENST00000411482 ABCC5O15440 1437 aa28.15■■■□□ 2.1
LMO2-203ENST00000411482 AFAP1Q8N556 730 aa28.14■■■□□ 2.1
LMO2-203ENST00000411482 TRAPPC8Q9Y2L5 1435 aa28.14■■■□□ 2.1
LMO2-203ENST00000411482 KIAA1107Q9UPP5 1409 aa28.13■■■□□ 2.09
LMO2-203ENST00000411482 HNRNPMP52272 730 aaKnown RBP eCLIP28.13■■■□□ 2.09
LMO2-203ENST00000411482 ZMYM4Q5VZL5 1548 aa28.11■■■□□ 2.09
LMO2-203ENST00000411482 SYCP2Q9BX26 1530 aa28.11■■■□□ 2.09
LMO2-203ENST00000411482 CAMSAP2Q08AD1 1489 aa28.09■■■□□ 2.09
LMO2-203ENST00000411482 ZNF518AQ6AHZ1 1483 aa28.09■■■□□ 2.09
LMO2-203ENST00000411482 PLEKHH2Q8IVE3 1493 aa28.09■■■□□ 2.09
LMO2-203ENST00000411482 MBD5Q9P267 1494 aa28.09■■■□□ 2.09
LMO2-203ENST00000411482 KDM5CP41229 1560 aa28.09■■■□□ 2.09
LMO2-203ENST00000411482 RRP7BPQ9NSQ0 103 aa28.04■■■□□ 2.08
LMO2-203ENST00000411482 DIEXFQ68CQ4 756 aaKnown RBP28.03■■■□□ 2.08
LMO2-203ENST00000411482 CHIC2Q9UKJ5 165 aa28.03■■■□□ 2.08
LMO2-203ENST00000411482 MAGI2Q86UL8 1455 aa28.03■■■□□ 2.08
LMO2-203ENST00000411482 YEATS2Q9ULM3 1422 aa28.02■■■□□ 2.08
LMO2-203ENST00000411482 ADGRL2O95490 1459 aa28■■■□□ 2.07
LMO2-203ENST00000411482 MLH3Q9UHC1 1453 aa28■■■□□ 2.07
LMO2-203ENST00000411482 ARHGEF40Q8TER5 1519 aa27.97■■■□□ 2.07
LMO2-203ENST00000411482 KIDINS220Q9ULH0 1771 aa27.97■■■□□ 2.07
LMO2-203ENST00000411482 ZFYVE16Q7Z3T8 1539 aa27.97■■■□□ 2.07
LMO2-203ENST00000411482 HECW2Q9P2P5 1572 aa27.97■■■□□ 2.07
LMO2-203ENST00000411482 SIN3AQ96ST3 1273 aa27.96■■■□□ 2.07
LMO2-203ENST00000411482 ARHGEF5Q12774 1597 aa27.95■■■□□ 2.07
LMO2-203ENST00000411482 CROCC2H7BZ55 1655 aa27.95■■■□□ 2.07
LMO2-203ENST00000411482 NCOA1Q15788 1441 aa27.95■■■□□ 2.06
LMO2-203ENST00000411482 RSPH4AQ5TD94 716 aa27.94■■■□□ 2.06
LMO2-203ENST00000411482 SHANK2Q9UPX8 1470 aa27.93■■■□□ 2.06
LMO2-203ENST00000411482 ADGBQ8N7X0 1667 aa27.93■■■□□ 2.06
LMO2-203ENST00000411482 SPAG9O60271 1321 aaKnown RBP27.92■■■□□ 2.06
LMO2-203ENST00000411482 CCDC141Q6ZP82 1450 aa27.91■■■□□ 2.06
LMO2-203ENST00000411482 SIGLEC1Q9BZZ2 1709 aa27.91■■■□□ 2.06
LMO2-203ENST00000411482 ABCA6Q8N139 1617 aa27.9■■■□□ 2.06
LMO2-203ENST00000411482 INO80Q9ULG1 1556 aaPredicted RBP27.9■■■□□ 2.06
LMO2-203ENST00000411482 DIP2CQ9Y2E4 1556 aa27.9■■■□□ 2.06
LMO2-203ENST00000411482 ATP10AO60312 1499 aa27.9■■■□□ 2.06
LMO2-203ENST00000411482 ATP7AQ04656 1500 aa27.88■■■□□ 2.05
LMO2-203ENST00000411482 RTEL1-TNFRSF6BF6WH68 1400 aa27.86■■■□□ 2.05
LMO2-203ENST00000411482 MYT1LQ9UL68 1186 aa27.86■■■□□ 2.05
LMO2-203ENST00000411482 PPP1R15AO75807 674 aaPredicted RBP27.84■■■□□ 2.05
LMO2-203ENST00000411482 NEUROD1Q13562 356 aa27.84■■■□□ 2.05
LMO2-203ENST00000411482 ANKRD30AQ9BXX3 1397 aa27.84■■■□□ 2.05
LMO2-203ENST00000411482 MPHOSPH9Q99550 1183 aa27.82■■■□□ 2.04
LMO2-203ENST00000411482 C9orf84Q5VXU9 1444 aa27.82■■■□□ 2.04
LMO2-203ENST00000411482 KDM4FA0A1W2PPD8 638 aa27.81■■■□□ 2.04
LMO2-203ENST00000411482 TSPY4P0CV99 314 aa27.81■■■□□ 2.04
LMO2-203ENST00000411482 TSPY10P0CW01 314 aa27.81■■■□□ 2.04
LMO2-203ENST00000411482 REREQ9P2R6 1566 aa27.8■■■□□ 2.04
LMO2-203ENST00000411482 MAST1Q9Y2H9 1570 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms