RNA–Protein interactions for RNA: ENST00000410720.1

RNU6-248P-201, Transcript of RNA, U6 small nuclear 248, pseudogene, humanhuman

BASIC

Gene RNU6-248P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-248P-201ENST00000410720 TMEM121BQ9BXQ6 578 aaPredicted RBP9.9□□□□□ -0.82
RNU6-248P-201ENST00000410720 SPRYD3Q8NCJ5 442 aa9.89□□□□□ -0.83
RNU6-248P-201ENST00000410720 TMEM92Q6UXU6 159 aa9.83□□□□□ -0.84
RNU6-248P-201ENST00000410720 TMC2Q8TDI7 906 aa9.82□□□□□ -0.84
RNU6-248P-201ENST00000410720 PLSCR2Q9NRY7 297 aa9.81□□□□□ -0.84
RNU6-248P-201ENST00000410720 ST18O60284 1047 aa9.8□□□□□ -0.84
RNU6-248P-201ENST00000410720 C2orf72A6NCS6 295 aa9.79□□□□□ -0.84
RNU6-248P-201ENST00000410720 PCDH10Q9P2E7 1040 aa9.77□□□□□ -0.85
RNU6-248P-201ENST00000410720 SNPHO15079 494 aa9.75□□□□□ -0.85
RNU6-248P-201ENST00000410720 CADPS2Q86UW7 1296 aa9.73□□□□□ -0.85
RNU6-248P-201ENST00000410720 KIF3CO14782 793 aa9.72□□□□□ -0.85
RNU6-248P-201ENST00000410720 ZNF710Q8N1W2 664 aa9.72□□□□□ -0.85
RNU6-248P-201ENST00000410720 GPHNQ9NQX3 736 aaPredicted RBP9.71□□□□□ -0.86
RNU6-248P-201ENST00000410720 PDE4AP27815 886 aa9.7□□□□□ -0.86
RNU6-248P-201ENST00000410720 PLCB2Q00722 1185 aa9.7□□□□□ -0.86
RNU6-248P-201ENST00000410720 DOK7Q18PE1 504 aa9.7□□□□□ -0.86
RNU6-248P-201ENST00000410720 LARP6Q9BRS8 491 aaKnown RBP9.7□□□□□ -0.86
RNU6-248P-201ENST00000410720 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
RNU6-248P-201ENST00000410720 DSG2Q14126 1118 aa9.69□□□□□ -0.86
RNU6-248P-201ENST00000410720 RIMBP2O15034 1052 aa9.68□□□□□ -0.86
RNU6-248P-201ENST00000410720 HOXB3P14651 431 aaPredicted RBP9.68□□□□□ -0.86
RNU6-248P-201ENST00000410720 CDAN1Q8IWY9 1227 aa9.68□□□□□ -0.86
RNU6-248P-201ENST00000410720 PLPP6Q8IY26 295 aa9.68□□□□□ -0.86
RNU6-248P-201ENST00000410720 CRISPLD2Q9H0B8 497 aa9.68□□□□□ -0.86
RNU6-248P-201ENST00000410720 PPP1R15BQ5SWA1 713 aa9.67□□□□□ -0.86
RNU6-248P-201ENST00000410720 FOXK1P85037 733 aa9.66□□□□□ -0.86
RNU6-248P-201ENST00000410720 MARVELD3Q96A59 401 aa9.66□□□□□ -0.86
RNU6-248P-201ENST00000410720 DDX27Q96GQ7 796 aaKnown RBP9.66□□□□□ -0.86
RNU6-248P-201ENST00000410720 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
RNU6-248P-201ENST00000410720 HAP1P54257 671 aaPredicted RBP9.65□□□□□ -0.86
RNU6-248P-201ENST00000410720 ARSIQ5FYB1 569 aa9.61□□□□□ -0.87
RNU6-248P-201ENST00000410720 UPF1Q92900 1129 aaKnown RBP eCLIP9.61□□□□□ -0.87
RNU6-248P-201ENST00000410720 EMP3P54852 163 aa9.6□□□□□ -0.87
RNU6-248P-201ENST00000410720 KHSRPQ92945 711 aaKnown RBP eCLIP9.6□□□□□ -0.87
RNU6-248P-201ENST00000410720 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
RNU6-248P-201ENST00000410720 MFSD10Q14728 455 aa9.58□□□□□ -0.88
RNU6-248P-201ENST00000410720 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
RNU6-248P-201ENST00000410720 PCDHGA4Q9Y5G9 962 aa9.57□□□□□ -0.88
RNU6-248P-201ENST00000410720 NUDT7P0C024 238 aa9.56□□□□□ -0.88
RNU6-248P-201ENST00000410720 HOXB1P14653 301 aaPredicted RBP9.56□□□□□ -0.88
RNU6-248P-201ENST00000410720 POTEB3A0JP26 581 aa9.55□□□□□ -0.88
RNU6-248P-201ENST00000410720 SLC34A2O95436 690 aa9.55□□□□□ -0.88
RNU6-248P-201ENST00000410720 GPR153Q6NV75 609 aa9.55□□□□□ -0.88
RNU6-248P-201ENST00000410720 POTEBQ6S5H4 581 aa9.55□□□□□ -0.88
RNU6-248P-201ENST00000410720 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
RNU6-248P-201ENST00000410720 TBC1D12O60347 775 aa9.54□□□□□ -0.88
RNU6-248P-201ENST00000410720 ERBB3P21860 1342 aa9.53□□□□□ -0.88
RNU6-248P-201ENST00000410720 PTCD2Q8WV60 388 aaKnown RBP9.52□□□□□ -0.89
RNU6-248P-201ENST00000410720 HS3ST6Q96QI5 342 aa9.52□□□□□ -0.89
RNU6-248P-201ENST00000410720 MAP3K9P80192 1104 aa9.51□□□□□ -0.89
RNU6-248P-201ENST00000410720 OXER1Q8TDS5 423 aa9.5□□□□□ -0.89
RNU6-248P-201ENST00000410720 EMILIN3Q9NT22 766 aa9.5□□□□□ -0.89
RNU6-248P-201ENST00000410720 E2F4Q16254 413 aa9.49□□□□□ -0.89
RNU6-248P-201ENST00000410720 VARS2Q5ST30 1063 aaKnown RBP9.49□□□□□ -0.89
RNU6-248P-201ENST00000410720 DPYSL4O14531 572 aa9.47□□□□□ -0.89
RNU6-248P-201ENST00000410720 KRTAP3-3Q9BYR6 98 aa9.47□□□□□ -0.89
RNU6-248P-201ENST00000410720 KRTAP3-2Q9BYR7 98 aa9.47□□□□□ -0.89
RNU6-248P-201ENST00000410720 LHX6Q9UPM6 363 aa9.47□□□□□ -0.89
RNU6-248P-201ENST00000410720 ZNF316A6NFI3 1004 aaPredicted RBP9.46□□□□□ -0.9
RNU6-248P-201ENST00000410720 EVI5O60447 810 aa9.45□□□□□ -0.9
RNU6-248P-201ENST00000410720 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
RNU6-248P-201ENST00000410720 SPNS2Q8IVW8 549 aa9.45□□□□□ -0.9
RNU6-248P-201ENST00000410720 MMRN1Q13201 1228 aa9.4□□□□□ -0.9
RNU6-248P-201ENST00000410720 KCNV2Q8TDN2 545 aa9.39□□□□□ -0.91
RNU6-248P-201ENST00000410720 KDM2AQ9Y2K7 1162 aa9.39□□□□□ -0.91
RNU6-248P-201ENST00000410720 KDM4FA0A1W2PPD8 638 aa9.38□□□□□ -0.91
RNU6-248P-201ENST00000410720 ZNF454Q8N9F8 522 aa9.38□□□□□ -0.91
RNU6-248P-201ENST00000410720 PSDA5PKW4 1024 aaPredicted RBP9.36□□□□□ -0.91
RNU6-248P-201ENST00000410720 PPP4R3BQ5MIZ7 849 aa9.36□□□□□ -0.91
RNU6-248P-201ENST00000410720 P3H3Q8IVL6 736 aa9.36□□□□□ -0.91
RNU6-248P-201ENST00000410720 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
RNU6-248P-201ENST00000410720 DDX12PQ92771 950 aa9.35□□□□□ -0.91
RNU6-248P-201ENST00000410720 ZNF687Q8N1G0 1237 aa9.34□□□□□ -0.91
RNU6-248P-201ENST00000410720 PDIA6Q15084 440 aa9.33□□□□□ -0.92
RNU6-248P-201ENST00000410720 ANO8Q9HCE9 1232 aaPredicted RBP9.33□□□□□ -0.92
RNU6-248P-201ENST00000410720 AXIN2Q9Y2T1 843 aa9.33□□□□□ -0.92
RNU6-248P-201ENST00000410720 SPDYE16A6NNV3 312 aaPredicted RBP9.32□□□□□ -0.92
RNU6-248P-201ENST00000410720 GRXCR2A6NFK2 248 aa9.31□□□□□ -0.92
RNU6-248P-201ENST00000410720 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
RNU6-248P-201ENST00000410720 JPH4Q96JJ6 628 aa9.31□□□□□ -0.92
RNU6-248P-201ENST00000410720 FOSBP53539 338 aa9.3□□□□□ -0.92
RNU6-248P-201ENST00000410720 NBR1Q14596 966 aa9.29□□□□□ -0.92
RNU6-248P-201ENST00000410720 ZDHHC16Q969W1 377 aa9.29□□□□□ -0.92
RNU6-248P-201ENST00000410720 KCNH8Q96L42 1107 aa9.29□□□□□ -0.92
RNU6-248P-201ENST00000410720 KCNK17Q96T54 332 aa9.29□□□□□ -0.92
RNU6-248P-201ENST00000410720 ARIH1Q9Y4X5 557 aaPredicted RBP9.29□□□□□ -0.92
RNU6-248P-201ENST00000410720 RBM33Q96EV2 1170 aaKnown RBP9.28□□□□□ -0.92
RNU6-248P-201ENST00000410720 PCDHGA10Q9Y5H3 936 aa9.28□□□□□ -0.92
RNU6-248P-201ENST00000410720 PHF14O94880 888 aa9.27□□□□□ -0.93
RNU6-248P-201ENST00000410720 PSEN2P49810 448 aa9.27□□□□□ -0.93
RNU6-248P-201ENST00000410720 ANKRD13DQ6ZTN6 518 aa9.27□□□□□ -0.93
RNU6-248P-201ENST00000410720 PBX2P40425 430 aa9.26□□□□□ -0.93
RNU6-248P-201ENST00000410720 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
RNU6-248P-201ENST00000410720 ADAM33Q9BZ11 813 aa9.26□□□□□ -0.93
RNU6-248P-201ENST00000410720 ARHGAP33O14559 1287 aa9.25□□□□□ -0.93
RNU6-248P-201ENST00000410720 POTEEQ6S8J3 1075 aa9.25□□□□□ -0.93
RNU6-248P-201ENST00000410720 PTPREP23469 700 aa9.24□□□□□ -0.93
RNU6-248P-201ENST00000410720 PTGER2P43116 358 aa9.24□□□□□ -0.93
RNU6-248P-201ENST00000410720 EPAS1Q99814 870 aa9.24□□□□□ -0.93
RNU6-248P-201ENST00000410720 SEMA3EO15041 775 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms