RNA–Protein interactions for RNA: ENST00000409788.7

CAB39-202, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CAB39, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-202ENST00000409788 SUPT6HQ7KZ85 1726 aaKnown RBP29.07■■■□□ 2.24
CAB39-202ENST00000409788 ARHGAP5Q13017 1502 aa29.06■■■□□ 2.24
CAB39-202ENST00000409788 GPATCH8Q9UKJ3 1502 aaKnown RBP29.05■■■□□ 2.24
CAB39-202ENST00000409788 NCOA2Q15596 1464 aa29.03■■■□□ 2.24
CAB39-202ENST00000409788 APLP2Q06481 763 aa29.02■■■□□ 2.24
CAB39-202ENST00000409788 EFCAB2Q5VUJ9 269 aa29.02■■■□□ 2.24
CAB39-202ENST00000409788 CCNB3Q8WWL7 1395 aa29■■■□□ 2.23
CAB39-202ENST00000409788 FRMPD1Q5SYB0 1578 aa28.98■■■□□ 2.23
CAB39-202ENST00000409788 ADGRL1O94910 1474 aa28.98■■■□□ 2.23
CAB39-202ENST00000409788 RAPGEF3O95398 923 aa28.98■■■□□ 2.23
CAB39-202ENST00000409788 RICTORQ6R327 1708 aa28.97■■■□□ 2.23
CAB39-202ENST00000409788 ITSN2Q9NZM3 1697 aa28.95■■■□□ 2.23
CAB39-202ENST00000409788 SCAPERQ9BY12 1400 aa28.94■■■□□ 2.22
CAB39-202ENST00000409788 DENND4BO75064 1496 aaPredicted RBP28.93■■■□□ 2.22
CAB39-202ENST00000409788 SAMD9LQ8IVG5 1584 aa28.92■■■□□ 2.22
CAB39-202ENST00000409788 CFDP1Q9UEE9 299 aaPredicted RBP28.91■■■□□ 2.22
CAB39-202ENST00000409788 ABCC1P33527 1531 aa28.9■■■□□ 2.22
CAB39-202ENST00000409788 ARHGEF12Q9NZN5 1544 aa28.89■■■□□ 2.22
CAB39-202ENST00000409788 POGZQ7Z3K3 1410 aa28.87■■■□□ 2.21
CAB39-202ENST00000409788 ZNF777Q9ULD5 760 aaPredicted RBP28.87■■■□□ 2.21
CAB39-202ENST00000409788 ZNF644Q9H582 1327 aaPredicted RBP28.83■■■□□ 2.21
CAB39-202ENST00000409788 ZMYM4Q5VZL5 1548 aa28.82■■■□□ 2.2
CAB39-202ENST00000409788 SYCP2Q9BX26 1530 aa28.82■■■□□ 2.2
CAB39-202ENST00000409788 TRAPPC8Q9Y2L5 1435 aa28.81■■■□□ 2.2
CAB39-202ENST00000409788 ZNF518AQ6AHZ1 1483 aa28.8■■■□□ 2.2
CAB39-202ENST00000409788 MYOM3Q5VTT5 1437 aa28.8■■■□□ 2.2
CAB39-202ENST00000409788 AFAP1Q8N556 730 aa28.8■■■□□ 2.2
CAB39-202ENST00000409788 KDM5CP41229 1560 aa28.79■■■□□ 2.2
CAB39-202ENST00000409788 KIAA1107Q9UPP5 1409 aa28.78■■■□□ 2.2
CAB39-202ENST00000409788 HNRNPMP52272 730 aaKnown RBP eCLIP28.77■■■□□ 2.29e-7■■■■□ 26.6
CAB39-202ENST00000409788 PLEKHH2Q8IVE3 1493 aa28.76■■■□□ 2.2
CAB39-202ENST00000409788 CAMSAP2Q08AD1 1489 aa28.75■■■□□ 2.19
CAB39-202ENST00000409788 PPARGC1BQ86YN6 1023 aaKnown RBP28.74■■■□□ 2.19
CAB39-202ENST00000409788 MBD5Q9P267 1494 aa28.73■■■□□ 2.19
CAB39-202ENST00000409788 MIA2Q96PC5 1412 aa28.73■■■□□ 2.19
CAB39-202ENST00000409788 YEATS2Q9ULM3 1422 aa28.72■■■□□ 2.19
CAB39-202ENST00000409788 ARHGEF40Q8TER5 1519 aa28.72■■■□□ 2.19
CAB39-202ENST00000409788 MAGI2Q86UL8 1455 aa28.71■■■□□ 2.19
CAB39-202ENST00000409788 ZFYVE16Q7Z3T8 1539 aa28.7■■■□□ 2.18
CAB39-202ENST00000409788 HECW2Q9P2P5 1572 aa28.7■■■□□ 2.18
CAB39-202ENST00000409788 KIDINS220Q9ULH0 1771 aa28.66■■■□□ 2.18
CAB39-202ENST00000409788 FGD6Q6ZV73 1430 aa28.66■■■□□ 2.18
CAB39-202ENST00000409788 MLH3Q9UHC1 1453 aa28.66■■■□□ 2.18
CAB39-202ENST00000409788 PTPN23Q9H3S7 1636 aa28.65■■■□□ 2.18
CAB39-202ENST00000409788 SIGLEC1Q9BZZ2 1709 aa28.63■■■□□ 2.17
CAB39-202ENST00000409788 ARHGEF5Q12774 1597 aa28.62■■■□□ 2.17
CAB39-202ENST00000409788 ABCA6Q8N139 1617 aa28.61■■■□□ 2.17
CAB39-202ENST00000409788 INO80Q9ULG1 1556 aaPredicted RBP28.6■■■□□ 2.17
CAB39-202ENST00000409788 DIP2CQ9Y2E4 1556 aa28.6■■■□□ 2.17
CAB39-202ENST00000409788 CCDC141Q6ZP82 1450 aa28.59■■■□□ 2.17
CAB39-202ENST00000409788 SPAG9O60271 1321 aaKnown RBP28.59■■■□□ 2.17
CAB39-202ENST00000409788 TCOF1Q13428 1488 aaKnown RBP28.59■■■□□ 2.17
CAB39-202ENST00000409788 MYT1LQ9UL68 1186 aa28.58■■■□□ 2.17
CAB39-202ENST00000409788 ATP7AQ04656 1500 aa28.57■■■□□ 2.16
CAB39-202ENST00000409788 ATP10AO60312 1499 aa28.57■■■□□ 2.16
CAB39-202ENST00000409788 RSPH4AQ5TD94 716 aa28.54■■■□□ 2.16
CAB39-202ENST00000409788 C9orf84Q5VXU9 1444 aa28.52■■■□□ 2.16
CAB39-202ENST00000409788 KDM4FA0A1W2PPD8 638 aa28.51■■■□□ 2.15
CAB39-202ENST00000409788 RTEL1-TNFRSF6BF6WH68 1400 aa28.5■■■□□ 2.15
CAB39-202ENST00000409788 REREQ9P2R6 1566 aa28.49■■■□□ 2.15
CAB39-202ENST00000409788 DNMT1P26358 1616 aaKnown RBP28.48■■■□□ 2.15
CAB39-202ENST00000409788 CROCC2H7BZ55 1655 aa28.48■■■□□ 2.15
CAB39-202ENST00000409788 ABCC5O15440 1437 aa28.47■■■□□ 2.15
CAB39-202ENST00000409788 MAST1Q9Y2H9 1570 aa28.46■■■□□ 2.15
CAB39-202ENST00000409788 BCORL1Q5H9F3 1711 aa28.46■■■□□ 2.15
CAB39-202ENST00000409788 ARID4BQ4LE39 1312 aaPredicted RBP28.46■■■□□ 2.15
CAB39-202ENST00000409788 ADGBQ8N7X0 1667 aa28.45■■■□□ 2.15
CAB39-202ENST00000409788 DAPK1P53355 1430 aa28.45■■■□□ 2.14
CAB39-202ENST00000409788 TSPY4P0CV99 314 aa28.44■■■□□ 2.14
CAB39-202ENST00000409788 TSPY10P0CW01 314 aa28.44■■■□□ 2.14
CAB39-202ENST00000409788 FAM50AQ14320 339 aaKnown RBP28.44■■■□□ 2.14
CAB39-202ENST00000409788 PLXNC1O60486 1568 aa28.41■■■□□ 2.14
CAB39-202ENST00000409788 ADAMTSL3P82987 1691 aa28.41■■■□□ 2.14
CAB39-202ENST00000409788 A2MP01023 1474 aa28.4■■■□□ 2.14
CAB39-202ENST00000409788 SHANK2Q9UPX8 1470 aa28.4■■■□□ 2.14
CAB39-202ENST00000409788 AGLP35573 1532 aa28.39■■■□□ 2.14
CAB39-202ENST00000409788 RRBP1Q9P2E9 1410 aaKnown RBP28.37■■■□□ 2.13
CAB39-202ENST00000409788 MLECQ14165 292 aa28.34■■■□□ 2.13
CAB39-202ENST00000409788 MADDQ8WXG6 1647 aa28.33■■■□□ 2.13
CAB39-202ENST00000409788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.33■■■□□ 2.131e-11■■□□□ 11.9
CAB39-202ENST00000409788 DHX29Q7Z478 1369 aaKnown RBP28.32■■■□□ 2.12
CAB39-202ENST00000409788 PTPRKQ15262 1439 aa28.32■■■□□ 2.12
CAB39-202ENST00000409788 CHIC2Q9UKJ5 165 aa28.3■■■□□ 2.12
CAB39-202ENST00000409788 FER1L4A9Z1Z3 1794 aa28.28■■■□□ 2.12
CAB39-202ENST00000409788 NCOA1Q15788 1441 aa28.26■■■□□ 2.11
CAB39-202ENST00000409788 RIMS1Q86UR5 1692 aaKnown RBP28.26■■■□□ 2.11
CAB39-202ENST00000409788 ADGRL2O95490 1459 aa28.25■■■□□ 2.11
CAB39-202ENST00000409788 KIF15Q9NS87 1388 aa28.25■■■□□ 2.11
CAB39-202ENST00000409788 RRP7BPQ9NSQ0 103 aa28.25■■■□□ 2.11
CAB39-202ENST00000409788 DUOX2Q9NRD8 1548 aa28.23■■■□□ 2.11
CAB39-202ENST00000409788 ANKRD30AQ9BXX3 1397 aa28.22■■■□□ 2.11
CAB39-202ENST00000409788 ITGAEP38570 1179 aa28.21■■■□□ 2.11
CAB39-202ENST00000409788 PTPRMP28827 1452 aa28.2■■■□□ 2.11
CAB39-202ENST00000409788 KIF3BO15066 747 aa28.19■■■□□ 2.1
CAB39-202ENST00000409788 EIF2AK4Q9P2K8 1649 aaKnown RBP28.18■■■□□ 2.1
CAB39-202ENST00000409788 AEBP2Q6ZN18 517 aaPredicted RBP28.18■■■□□ 2.1
CAB39-202ENST00000409788 GGT6Q6P531 493 aa28.17■■■□□ 2.1
CAB39-202ENST00000409788 ERBINQ96RT1 1412 aa28.14■■■□□ 2.1
CAB39-202ENST00000409788 RNF17Q9BXT8 1623 aaKnown RBP28.14■■■□□ 2.1
CAB39-202ENST00000409788 ROCK1Q13464 1354 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms