RNA–Protein interactions for RNA: ENST00000409788.7

CAB39-202, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CAB39, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-202ENST00000409788 NISCHQ9Y2I1 1504 aa44.65■■■■■ 4.74
CAB39-202ENST00000409788 CCDC180Q9P1Z9 1646 aa39.59■■■■□ 3.93
CAB39-202ENST00000409788 ABCC9O60706 1549 aa38.55■■■■□ 3.76
CAB39-202ENST00000409788 ZCCHC6Q5VYS8 1495 aaKnown RBP37.24■■■■□ 3.55
CAB39-202ENST00000409788 DCAF8L2P0C7V8 631 aa37.18■■■■□ 3.54
CAB39-202ENST00000409788 NACADO15069 1562 aa37.15■■■■□ 3.54
CAB39-202ENST00000409788 RB1CC1Q8TDY2 1594 aa37.13■■■■□ 3.53
CAB39-202ENST00000409788 MYO15BQ96JP2 1530 aa36.99■■■■□ 3.51
CAB39-202ENST00000409788 DCAF1Q9Y4B6 1507 aa36.93■■■■□ 3.5
CAB39-202ENST00000409788 UNC13AQ9UPW8 1703 aa36.43■■■■□ 3.42
CAB39-202ENST00000409788 SCRIBQ14160 1630 aa36.17■■■■□ 3.38
CAB39-202ENST00000409788 BICRAQ9NZM4 1560 aa36.09■■■■□ 3.37
CAB39-202ENST00000409788 PABPN1Q86U42 306 aaKnown RBP eCLIP36.06■■■■□ 3.36
CAB39-202ENST00000409788 SHROOM4Q9ULL8 1493 aa35.6■■■■□ 3.29
CAB39-202ENST00000409788 DNAJC5BQ9UF47 199 aa35.24■■■■□ 3.23
CAB39-202ENST00000409788 EIF4G1Q04637 1599 aaKnown RBP35.07■■■■□ 3.21
CAB39-202ENST00000409788 CC2D2AQ9P2K1 1620 aa34.89■■■■□ 3.18
CAB39-202ENST00000409788 CECR2Q9BXF3 1484 aa34.8■■■■□ 3.16
CAB39-202ENST00000409788 SMARCA4P51532 1647 aa34.61■■■■□ 3.13
CAB39-202ENST00000409788 BAZ1AQ9NRL2 1556 aaPredicted RBP34.57■■■■□ 3.12
CAB39-202ENST00000409788 MROH2BQ7Z745 1585 aa34.45■■■■□ 3.1
CAB39-202ENST00000409788 ATAD2BQ9ULI0 1458 aa34.35■■■■□ 3.09
CAB39-202ENST00000409788 SMARCA2P51531 1590 aa34.29■■■■□ 3.08
CAB39-202ENST00000409788 NCAPD3P42695 1498 aa34.28■■■■□ 3.08
CAB39-202ENST00000409788 PEG3Q9GZU2 1588 aa34.27■■■■□ 3.08
CAB39-202ENST00000409788 HMGXB3Q12766 1538 aa34.14■■■■□ 3.06
CAB39-202ENST00000409788 RSF1Q96T23 1441 aaPredicted RBP34.1■■■■□ 3.05
CAB39-202ENST00000409788 WIZO95785 1651 aa34.1■■■■□ 3.05
CAB39-202ENST00000409788 BAZ1BQ9UIG0 1483 aaKnown RBP34.05■■■■□ 3.04
CAB39-202ENST00000409788 TOP2AP11388 1531 aaKnown RBP33.7■■■□□ 2.99
CAB39-202ENST00000409788 NESP48681 1621 aa33.46■■■□□ 2.95
CAB39-202ENST00000409788 SUPT5HO00267 1087 aaKnown RBP33.38■■■□□ 2.93
CAB39-202ENST00000409788 LAMC3Q9Y6N6 1575 aa33.34■■■□□ 2.93
CAB39-202ENST00000409788 CCDC88BA6NC98 1476 aa33.32■■■□□ 2.92
CAB39-202ENST00000409788 CADPSQ9ULU8 1353 aa33.29■■■□□ 2.92
CAB39-202ENST00000409788 CFTRP13569 1480 aa33.16■■■□□ 2.9
CAB39-202ENST00000409788 ERCC6Q03468 1493 aa33.15■■■□□ 2.9
CAB39-202ENST00000409788 KIF21AQ7Z4S6 1674 aa33.08■■■□□ 2.89
CAB39-202ENST00000409788 PDS5BQ9NTI5 1447 aa33.07■■■□□ 2.88
CAB39-202ENST00000409788 PRDM2Q13029 1718 aa32.97■■■□□ 2.87
CAB39-202ENST00000409788 FANCD2Q9BXW9 1451 aa32.92■■■□□ 2.86
CAB39-202ENST00000409788 THOC2Q8NI27 1593 aaKnown RBP32.9■■■□□ 2.86
CAB39-202ENST00000409788 CEP164Q9UPV0 1460 aa32.84■■■□□ 2.85
CAB39-202ENST00000409788 MRC2Q9UBG0 1479 aa32.75■■■□□ 2.83
CAB39-202ENST00000409788 CUX2O14529 1486 aa32.72■■■□□ 2.83
CAB39-202ENST00000409788 WDR62O43379 1518 aa32.66■■■□□ 2.82
CAB39-202ENST00000409788 URB2Q14146 1524 aaKnown RBP32.62■■■□□ 2.81
CAB39-202ENST00000409788 TOPBP1Q92547 1522 aa32.44■■■□□ 2.78
CAB39-202ENST00000409788 DNMBPQ6XZF7 1577 aa32.4■■■□□ 2.78
CAB39-202ENST00000409788 ABCC8Q09428 1581 aa32.37■■■□□ 2.77
CAB39-202ENST00000409788 CUX1P39880 1505 aa32.29■■■□□ 2.76
CAB39-202ENST00000409788 POLA1P09884 1462 aaPredicted RBP32.18■■■□□ 2.74
CAB39-202ENST00000409788 FGD5Q6ZNL6 1462 aa32.13■■■□□ 2.73
CAB39-202ENST00000409788 IFT140Q96RY7 1462 aa32.13■■■□□ 2.73
CAB39-202ENST00000409788 WRNQ14191 1432 aaPredicted RBP eCLIP32.12■■■□□ 2.73
CAB39-202ENST00000409788 TARBP1Q13395 1621 aaKnown RBP32.1■■■□□ 2.73
CAB39-202ENST00000409788 SYNJ1O43426 1573 aa32.09■■■□□ 2.73
CAB39-202ENST00000409788 BIVM-ERCC5R4GMW8 1640 aa32.06■■■□□ 2.72
CAB39-202ENST00000409788 TOP2BQ02880 1626 aa32.06■■■□□ 2.72
CAB39-202ENST00000409788 RAD54L2Q9Y4B4 1467 aa32.05■■■□□ 2.72
CAB39-202ENST00000409788 ZNF608Q9ULD9 1512 aaPredicted RBP32.04■■■□□ 2.72
CAB39-202ENST00000409788 SOGA1O94964 1423 aa32.02■■■□□ 2.72
CAB39-202ENST00000409788 EIF4G3O43432 1585 aaKnown RBP31.92■■■□□ 2.7
CAB39-202ENST00000409788 WDR97A6NE52 1622 aa31.9■■■□□ 2.7
CAB39-202ENST00000409788 AQRO60306 1485 aaKnown RBP eCLIP31.87■■■□□ 2.693e-6■■■□□ 19
CAB39-202ENST00000409788 TDRD9Q8NDG6 1382 aaKnown RBP31.84■■■□□ 2.69
CAB39-202ENST00000409788 ABCA10Q8WWZ4 1543 aa31.82■■■□□ 2.68
CAB39-202ENST00000409788 ABCA5Q8WWZ7 1642 aa31.7■■■□□ 2.67
CAB39-202ENST00000409788 GAPVD1Q14C86 1478 aa31.66■■■□□ 2.66
CAB39-202ENST00000409788 PBRM1Q86U86 1689 aa31.63■■■□□ 2.65
CAB39-202ENST00000409788 GRIN2BQ13224 1484 aa31.61■■■□□ 2.65
CAB39-202ENST00000409788 SNAPC4Q5SXM2 1469 aa31.56■■■□□ 2.64
CAB39-202ENST00000409788 MAGI1Q96QZ7 1491 aaPredicted RBP31.5■■■□□ 2.63
CAB39-202ENST00000409788 DNAJC5Q9H3Z4 198 aa31.5■■■□□ 2.63
CAB39-202ENST00000409788 CHD1O14646 1710 aa31.5■■■□□ 2.63
CAB39-202ENST00000409788 TRIM41Q8WV44 630 aa31.48■■■□□ 2.63
CAB39-202ENST00000409788 ERICH3Q5RHP9 1530 aa31.43■■■□□ 2.62
CAB39-202ENST00000409788 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
CAB39-202ENST00000409788 OSCARQ8IYS5 282 aa31.4■■■□□ 2.62
CAB39-202ENST00000409788 FBLN2P98095 1184 aa31.39■■■□□ 2.62
CAB39-202ENST00000409788 SYNJ2O15056 1496 aa31.39■■■□□ 2.62
CAB39-202ENST00000409788 ADAMTS12P58397 1594 aa31.36■■■□□ 2.61
CAB39-202ENST00000409788 CHMP7Q8WUX9 453 aaPredicted RBP31.33■■■□□ 2.61
CAB39-202ENST00000409788 IGF1RP08069 1367 aa31.3■■■□□ 2.6
CAB39-202ENST00000409788 CHIC1Q5VXU3 224 aa31.3■■■□□ 2.6
CAB39-202ENST00000409788 RUSC2Q8N2Y8 1516 aa31.29■■■□□ 2.6
CAB39-202ENST00000409788 FHAD1B1AJZ9 1412 aa31.28■■■□□ 2.6
CAB39-202ENST00000409788 GRIN2AQ12879 1464 aa31.23■■■□□ 2.59
CAB39-202ENST00000409788 CUL7Q14999 1698 aa31.19■■■□□ 2.58
CAB39-202ENST00000409788 CLASP1Q7Z460 1538 aa31.13■■■□□ 2.57
CAB39-202ENST00000409788 CEP170Q5SW79 1584 aa31.1■■■□□ 2.57
CAB39-202ENST00000409788 CARMIL1Q5VZK9 1371 aa31.09■■■□□ 2.57
CAB39-202ENST00000409788 NUP160Q12769 1436 aa31.08■■■□□ 2.57
CAB39-202ENST00000409788 ARHGEF11O15085 1522 aa30.95■■■□□ 2.55
CAB39-202ENST00000409788 RIMBP3CA6NJZ7 1639 aa30.95■■■□□ 2.54
CAB39-202ENST00000409788 RIMBP3BA6NNM3 1639 aa30.95■■■□□ 2.54
CAB39-202ENST00000409788 RIMBP3Q9UFD9 1639 aa30.95■■■□□ 2.54
CAB39-202ENST00000409788 RAPGEF2Q9Y4G8 1499 aa30.93■■■□□ 2.54
CAB39-202ENST00000409788 EEA1Q15075 1411 aa30.92■■■□□ 2.54
CAB39-202ENST00000409788 PRXQ9BXM0 1461 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms