RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 PLEKHG5O94827 1062 aa13.59□□□□□ -0.23
POLR1A-203ENST00000409681 MPHOSPH9Q99550 1183 aa13.58□□□□□ -0.24
POLR1A-203ENST00000409681 A0A0G2JS52 829 aa13.58□□□□□ -0.24
POLR1A-203ENST00000409681 PRXQ9BXM0 1461 aa13.58□□□□□ -0.24
POLR1A-203ENST00000409681 GRIN2AQ12879 1464 aa13.57□□□□□ -0.24
POLR1A-203ENST00000409681 CUL7Q14999 1698 aa13.56□□□□□ -0.24
POLR1A-203ENST00000409681 TMF1P82094 1093 aa13.56□□□□□ -0.24
POLR1A-203ENST00000409681 UACAQ9BZF9 1416 aa13.56□□□□□ -0.24
POLR1A-203ENST00000409681 SRPK2P78362 688 aaKnown RBP13.54□□□□□ -0.24
POLR1A-203ENST00000409681 FYCO1Q9BQS8 1478 aa13.54□□□□□ -0.24
POLR1A-203ENST00000409681 PLEKHH2Q8IVE3 1493 aa13.54□□□□□ -0.24
POLR1A-203ENST00000409681 SIN3AQ96ST3 1273 aa13.53□□□□□ -0.24
POLR1A-203ENST00000409681 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.24
POLR1A-203ENST00000409681 IQGAP2Q13576 1575 aa13.52□□□□□ -0.25
POLR1A-203ENST00000409681 STK26Q9P289 416 aa13.51□□□□□ -0.25
POLR1A-203ENST00000409681 EIF3AQ14152 1382 aaKnown RBP13.51□□□□□ -0.25
POLR1A-203ENST00000409681 RAB3GAP2Q9H2M9 1393 aa13.51□□□□□ -0.25
POLR1A-203ENST00000409681 NUDCQ9Y266 331 aa13.51□□□□□ -0.25
POLR1A-203ENST00000409681 ZNF608Q9ULD9 1512 aaPredicted RBP13.49□□□□□ -0.25
POLR1A-203ENST00000409681 MRS2Q9HD23 443 aa13.49□□□□□ -0.25
POLR1A-203ENST00000409681 HDGFL2Q7Z4V5 671 aaPredicted RBP13.49□□□□□ -0.25
POLR1A-203ENST00000409681 FAM9BQ8IZU0 186 aa13.49□□□□□ -0.25
POLR1A-203ENST00000409681 VGFO15240 615 aaPredicted RBP13.49□□□□□ -0.25
POLR1A-203ENST00000409681 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.48□□□□□ -0.25
POLR1A-203ENST00000409681 HECW1Q76N89 1606 aa13.48□□□□□ -0.25
POLR1A-203ENST00000409681 POGZQ7Z3K3 1410 aa13.48□□□□□ -0.25
POLR1A-203ENST00000409681 TROQ12816 1431 aaPredicted RBP13.48□□□□□ -0.25
POLR1A-203ENST00000409681 PPM1GO15355 546 aaPredicted RBP13.47□□□□□ -0.25
POLR1A-203ENST00000409681 CCDC144AA2RUR9 1427 aa13.46□□□□□ -0.25
POLR1A-203ENST00000409681 KIF15Q9NS87 1388 aa13.46□□□□□ -0.26
POLR1A-203ENST00000409681 SAFB2Q14151 953 aaKnown RBP eCLIP13.45□□□□□ -0.26
POLR1A-203ENST00000409681 FGD6Q6ZV73 1430 aa13.45□□□□□ -0.26
POLR1A-203ENST00000409681 HIRIP3Q9BW71 556 aaPredicted RBP13.45□□□□□ -0.26
POLR1A-203ENST00000409681 PNNQ9H307 717 aaKnown RBP13.45□□□□□ -0.26
POLR1A-203ENST00000409681 FOXD1Q16676 465 aa13.45□□□□□ -0.26
POLR1A-203ENST00000409681 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.45□□□□□ -0.26
POLR1A-203ENST00000409681 LRRC9Q6ZRR7 1453 aa13.45□□□□□ -0.26
POLR1A-203ENST00000409681 NCOA2Q15596 1464 aa13.44□□□□□ -0.26
POLR1A-203ENST00000409681 ROCK2O75116 1388 aaKnown RBP13.44□□□□□ -0.26
POLR1A-203ENST00000409681 HNRNPUQ00839 825 aaKnown RBP eCLIP13.43□□□□□ -0.26
POLR1A-203ENST00000409681 BIVM-ERCC5R4GMW8 1640 aa13.43□□□□□ -0.26
POLR1A-203ENST00000409681 EHBP1L1Q8N3D4 1523 aa13.42□□□□□ -0.26
POLR1A-203ENST00000409681 AFAP1Q8N556 730 aa13.42□□□□□ -0.26
POLR1A-203ENST00000409681 MAPK8IP3Q9UPT6 1336 aa13.42□□□□□ -0.26
POLR1A-203ENST00000409681 STAC3Q96MF2 364 aa13.41□□□□□ -0.26
POLR1A-203ENST00000409681 CD109Q6YHK3 1445 aa13.39□□□□□ -0.27
POLR1A-203ENST00000409681 ARAP1Q96P48 1450 aa13.39□□□□□ -0.27
POLR1A-203ENST00000409681 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
POLR1A-203ENST00000409681 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
POLR1A-203ENST00000409681 MIA2Q96PC5 1412 aa13.38□□□□□ -0.27
POLR1A-203ENST00000409681 TERF2IPQ9NYB0 399 aa13.38□□□□□ -0.27
POLR1A-203ENST00000409681 WDR62O43379 1518 aa13.38□□□□□ -0.27
POLR1A-203ENST00000409681 SALL2Q9Y467 1007 aaPredicted RBP13.38□□□□□ -0.27
POLR1A-203ENST00000409681 SCAPERQ9BY12 1400 aa13.37□□□□□ -0.27
POLR1A-203ENST00000409681 ANKRD50Q9ULJ7 1429 aa13.37□□□□□ -0.27
POLR1A-203ENST00000409681 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
POLR1A-203ENST00000409681 NUTM2DQ5VT03 806 aaPredicted RBP13.36□□□□□ -0.27
POLR1A-203ENST00000409681 NGDNQ8NEJ9 315 aaKnown RBP13.36□□□□□ -0.27
POLR1A-203ENST00000409681 MORC1Q86VD1 984 aa13.36□□□□□ -0.27
POLR1A-203ENST00000409681 BCL11AQ9H165 835 aa13.36□□□□□ -0.27
POLR1A-203ENST00000409681 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
POLR1A-203ENST00000409681 THEMISQ8N1K5 641 aaPredicted RBP13.33□□□□□ -0.28
POLR1A-203ENST00000409681 PHLDB1Q86UU1 1377 aa13.33□□□□□ -0.28
POLR1A-203ENST00000409681 CSB-PGBD3P0DP91 1061 aa13.33□□□□□ -0.28
POLR1A-203ENST00000409681 RAPGEF3O95398 923 aa13.32□□□□□ -0.28
POLR1A-203ENST00000409681 L3MBTL2Q969R5 705 aa13.32□□□□□ -0.28
POLR1A-203ENST00000409681 TNNT2P45379 298 aaPredicted RBP13.32□□□□□ -0.28
POLR1A-203ENST00000409681 U2SURPO15042 1029 aaKnown RBP13.31□□□□□ -0.28
POLR1A-203ENST00000409681 SOX12O15370 315 aa13.31□□□□□ -0.28
POLR1A-203ENST00000409681 KIF21AQ7Z4S6 1674 aa13.31□□□□□ -0.28
POLR1A-203ENST00000409681 C9orf84Q5VXU9 1444 aa13.3□□□□□ -0.28
POLR1A-203ENST00000409681 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
POLR1A-203ENST00000409681 HSPA5P11021 654 aaKnown RBP13.3□□□□□ -0.28
POLR1A-203ENST00000409681 CC2D1BQ5T0F9 858 aaKnown RBP13.3□□□□□ -0.28
POLR1A-203ENST00000409681 TRAK1Q9UPV9 953 aa13.29□□□□□ -0.28
POLR1A-203ENST00000409681 ARXQ96QS3 562 aa13.28□□□□□ -0.28
POLR1A-203ENST00000409681 TEX14Q8IWB6 1497 aa13.28□□□□□ -0.28
POLR1A-203ENST00000409681 CCDC9Q9Y3X0 531 aaKnown RBP13.28□□□□□ -0.28
POLR1A-203ENST00000409681 SLC52A1Q9NWF4 448 aa13.27□□□□□ -0.28
POLR1A-203ENST00000409681 EVC2Q86UK5 1308 aa13.27□□□□□ -0.29
POLR1A-203ENST00000409681 ATF3P18847 181 aa13.26□□□□□ -0.29
POLR1A-203ENST00000409681 KIF14Q15058 1648 aa13.26□□□□□ -0.29
POLR1A-203ENST00000409681 DHX57Q6P158 1386 aaKnown RBP13.26□□□□□ -0.29
POLR1A-203ENST00000409681 SUPT6HQ7KZ85 1726 aaKnown RBP13.25□□□□□ -0.29
POLR1A-203ENST00000409681 ADGRL1O94910 1474 aa13.25□□□□□ -0.29
POLR1A-203ENST00000409681 CDK13Q14004 1512 aaKnown RBP13.25□□□□□ -0.29
POLR1A-203ENST00000409681 WDR97A6NE52 1622 aa13.25□□□□□ -0.29
POLR1A-203ENST00000409681 KTN1Q86UP2 1357 aaKnown RBP13.25□□□□□ -0.29
POLR1A-203ENST00000409681 TXNDC2Q86VQ3 553 aa13.25□□□□□ -0.29
POLR1A-203ENST00000409681 DENND4BO75064 1496 aaPredicted RBP13.24□□□□□ -0.29
POLR1A-203ENST00000409681 TIAM1Q13009 1591 aa13.24□□□□□ -0.29
POLR1A-203ENST00000409681 NPHP1O15259 732 aa13.24□□□□□ -0.29
POLR1A-203ENST00000409681 RTF1Q92541 710 aaKnown RBP13.24□□□□□ -0.29
POLR1A-203ENST00000409681 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
POLR1A-203ENST00000409681 AKNAQ7Z591 1439 aa13.24□□□□□ -0.29
POLR1A-203ENST00000409681 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
POLR1A-203ENST00000409681 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
POLR1A-203ENST00000409681 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
POLR1A-203ENST00000409681 ARHGEF11O15085 1522 aa13.22□□□□□ -0.29
POLR1A-203ENST00000409681 CHMP4AQ9BY43 222 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms