RNA–Protein interactions for RNA: ENST00000409432.7

PPM1B-205, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,025 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-205ENST00000409432 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
PPM1B-205ENST00000409432 MRC2Q9UBG0 1479 aa20.85■□□□□ 0.93
PPM1B-205ENST00000409432 IQGAP2Q13576 1575 aa20.84■□□□□ 0.93
PPM1B-205ENST00000409432 ERICH6Q7L0X2 663 aa20.82■□□□□ 0.92
PPM1B-205ENST00000409432 CFDP1Q9UEE9 299 aaPredicted RBP20.81■□□□□ 0.92
PPM1B-205ENST00000409432 MSH5O43196 834 aa20.79■□□□□ 0.92
PPM1B-205ENST00000409432 KDM5BQ9UGL1 1544 aa20.79■□□□□ 0.92
PPM1B-205ENST00000409432 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
PPM1B-205ENST00000409432 PRG4Q92954 1404 aaPredicted RBP20.78■□□□□ 0.92
PPM1B-205ENST00000409432 HECW1Q76N89 1606 aa20.77■□□□□ 0.92
PPM1B-205ENST00000409432 MRS2Q9HD23 443 aa20.75■□□□□ 0.91
PPM1B-205ENST00000409432 CDK11AQ9UQ88 783 aaPredicted RBP20.75■□□□□ 0.91
PPM1B-205ENST00000409432 ARHGEF11O15085 1522 aa20.75■□□□□ 0.91
PPM1B-205ENST00000409432 ADAMTS12P58397 1594 aa20.74■□□□□ 0.91
PPM1B-205ENST00000409432 ABCC5O15440 1437 aa20.72■□□□□ 0.91
PPM1B-205ENST00000409432 DAPK1P53355 1430 aa20.72■□□□□ 0.91
PPM1B-205ENST00000409432 WDR62O43379 1518 aa20.71■□□□□ 0.91
PPM1B-205ENST00000409432 KDM2AQ9Y2K7 1162 aa20.71■□□□□ 0.91
PPM1B-205ENST00000409432 PLB1Q6P1J6 1458 aa20.71■□□□□ 0.91
PPM1B-205ENST00000409432 TCOF1Q13428 1488 aaKnown RBP20.7■□□□□ 0.9
PPM1B-205ENST00000409432 NUP153P49790 1475 aaKnown RBP20.69■□□□□ 0.9
PPM1B-205ENST00000409432 JPH4Q96JJ6 628 aa20.69■□□□□ 0.9
PPM1B-205ENST00000409432 PKD2Q13563 968 aa20.69■□□□□ 0.9
PPM1B-205ENST00000409432 DISP1Q96F81 1524 aa20.68■□□□□ 0.9
PPM1B-205ENST00000409432 PRKRIP1Q9H875 184 aaPredicted RBP20.67■□□□□ 0.9
PPM1B-205ENST00000409432 MIA2Q96PC5 1412 aa20.67■□□□□ 0.9
PPM1B-205ENST00000409432 ANKRD30BQ9BXX2 1392 aa20.67■□□□□ 0.9
PPM1B-205ENST00000409432 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
PPM1B-205ENST00000409432 KIF7Q2M1P5 1343 aa20.66■□□□□ 0.9
PPM1B-205ENST00000409432 CCDC7Q96M83 1385 aa20.65■□□□□ 0.9
PPM1B-205ENST00000409432 KIAA0586Q9BVV6 1533 aa20.63■□□□□ 0.89
PPM1B-205ENST00000409432 GRIN2AQ12879 1464 aa20.63■□□□□ 0.89
PPM1B-205ENST00000409432 HNRNPMP52272 730 aaKnown RBP eCLIP20.61■□□□□ 0.893e-6■■■■□ 21.2
PPM1B-205ENST00000409432 EIF4G3O43432 1585 aaKnown RBP20.6■□□□□ 0.89
PPM1B-205ENST00000409432 CNTLNQ9NXG0 1405 aa20.59■□□□□ 0.89
PPM1B-205ENST00000409432 GCC2Q8IWJ2 1684 aa20.59■□□□□ 0.89
PPM1B-205ENST00000409432 KIAA0556O60303 1618 aa20.59■□□□□ 0.89
PPM1B-205ENST00000409432 PLEKHD1A6NEE1 506 aa20.58■□□□□ 0.89
PPM1B-205ENST00000409432 PRKCSHP14314 528 aaPredicted RBP20.58■□□□□ 0.88
PPM1B-205ENST00000409432 B4GALNT3Q6L9W6 998 aa20.56■□□□□ 0.88
PPM1B-205ENST00000409432 RPRD2Q5VT52 1461 aaKnown RBP20.56■□□□□ 0.88
PPM1B-205ENST00000409432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.54■□□□□ 0.88
PPM1B-205ENST00000409432 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
PPM1B-205ENST00000409432 CAMSAP2Q08AD1 1489 aa20.54■□□□□ 0.88
PPM1B-205ENST00000409432 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
PPM1B-205ENST00000409432 NUP155O75694 1391 aa20.53■□□□□ 0.88
PPM1B-205ENST00000409432 SALL2Q9Y467 1007 aaPredicted RBP20.53■□□□□ 0.88
PPM1B-205ENST00000409432 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
PPM1B-205ENST00000409432 TROQ12816 1431 aaPredicted RBP20.53■□□□□ 0.88
PPM1B-205ENST00000409432 AKNAQ7Z591 1439 aa20.53■□□□□ 0.88
PPM1B-205ENST00000409432 ROCK1Q13464 1354 aa20.52■□□□□ 0.88
PPM1B-205ENST00000409432 NBR1Q14596 966 aa20.51■□□□□ 0.87
PPM1B-205ENST00000409432 DCAF11Q8TEB1 546 aa20.51■□□□□ 0.87
PPM1B-205ENST00000409432 KIF14Q15058 1648 aa20.51■□□□□ 0.87
PPM1B-205ENST00000409432 GPATCH8Q9UKJ3 1502 aaKnown RBP20.51■□□□□ 0.87
PPM1B-205ENST00000409432 TEX14Q8IWB6 1497 aa20.51■□□□□ 0.87
PPM1B-205ENST00000409432 TSPY4P0CV99 314 aa20.51■□□□□ 0.87
PPM1B-205ENST00000409432 TSPY10P0CW01 314 aa20.51■□□□□ 0.87
PPM1B-205ENST00000409432 CARD11Q9BXL7 1154 aa20.5■□□□□ 0.87
PPM1B-205ENST00000409432 CEP170Q5SW79 1584 aa20.49■□□□□ 0.87
PPM1B-205ENST00000409432 PZPP20742 1482 aa20.49■□□□□ 0.87
PPM1B-205ENST00000409432 USP47Q96K76 1375 aa20.49■□□□□ 0.87
PPM1B-205ENST00000409432 DNMT1P26358 1616 aaKnown RBP20.48■□□□□ 0.87
PPM1B-205ENST00000409432 ANKRD30AQ9BXX3 1397 aa20.46■□□□□ 0.87
PPM1B-205ENST00000409432 ANKRD50Q9ULJ7 1429 aa20.46■□□□□ 0.87
PPM1B-205ENST00000409432 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.87
PPM1B-205ENST00000409432 DEKP35659 375 aaKnown RBP20.45■□□□□ 0.87
PPM1B-205ENST00000409432 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
PPM1B-205ENST00000409432 CARMIL2Q6F5E8 1435 aa20.43■□□□□ 0.86
PPM1B-205ENST00000409432 SPATA31E1Q6ZUB1 1445 aa20.43■□□□□ 0.86
PPM1B-205ENST00000409432 KIAA1107Q9UPP5 1409 aa20.41■□□□□ 0.86
PPM1B-205ENST00000409432 TMC1Q8TDI8 760 aa20.4■□□□□ 0.86
PPM1B-205ENST00000409432 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
PPM1B-205ENST00000409432 ZBED9Q6R2W3 1325 aa20.37■□□□□ 0.85
PPM1B-205ENST00000409432 C9orf84Q5VXU9 1444 aa20.36■□□□□ 0.85
PPM1B-205ENST00000409432 ATP10BO94823 1461 aa20.36■□□□□ 0.85
PPM1B-205ENST00000409432 PPP4R2Q9NY27 417 aa20.36■□□□□ 0.85
PPM1B-205ENST00000409432 KIF15Q9NS87 1388 aa20.35■□□□□ 0.85
PPM1B-205ENST00000409432 FANCIQ9NVI1 1328 aa20.35■□□□□ 0.85
PPM1B-205ENST00000409432 NBPF1Q3BBV0 1214 aa20.35■□□□□ 0.85
PPM1B-205ENST00000409432 DHX29Q7Z478 1369 aaKnown RBP20.33■□□□□ 0.85
PPM1B-205ENST00000409432 PTPRGP23470 1445 aa20.32■□□□□ 0.84
PPM1B-205ENST00000409432 BCORL1Q5H9F3 1711 aa20.31■□□□□ 0.84
PPM1B-205ENST00000409432 ROCK2O75116 1388 aaKnown RBP20.28■□□□□ 0.84
PPM1B-205ENST00000409432 NUP160Q12769 1436 aa20.27■□□□□ 0.84
PPM1B-205ENST00000409432 CC2D1BQ5T0F9 858 aaKnown RBP20.27■□□□□ 0.84
PPM1B-205ENST00000409432 ANO8Q9HCE9 1232 aaPredicted RBP20.27■□□□□ 0.84
PPM1B-205ENST00000409432 PAK3O75914 559 aaPredicted RBP20.25■□□□□ 0.83
PPM1B-205ENST00000409432 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
PPM1B-205ENST00000409432 RTN4Q9NQC3 1192 aaKnown RBP20.24■□□□□ 0.83
PPM1B-205ENST00000409432 ITSN2Q9NZM3 1697 aa20.23■□□□□ 0.83
PPM1B-205ENST00000409432 CCDC136Q96JN2 1154 aa20.22■□□□□ 0.83
PPM1B-205ENST00000409432 MBD5Q9P267 1494 aa20.22■□□□□ 0.83
PPM1B-205ENST00000409432 NUDCQ9Y266 331 aa20.21■□□□□ 0.83
PPM1B-205ENST00000409432 ADGRL2O95490 1459 aa20.21■□□□□ 0.83
PPM1B-205ENST00000409432 ABCC10Q5T3U5 1492 aa20.21■□□□□ 0.83
PPM1B-205ENST00000409432 CDC42BPAQ5VT25 1732 aa20.2■□□□□ 0.82
PPM1B-205ENST00000409432 MYT1LQ9UL68 1186 aa20.19■□□□□ 0.82
PPM1B-205ENST00000409432 NOP58Q9Y2X3 529 aaKnown RBP20.18■□□□□ 0.82
PPM1B-205ENST00000409432 ADGBQ8N7X0 1667 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms