RNA–Protein interactions for RNA: ENST00000409056.3

TMEFF2-203, Transcript of transmembrane protein with EGF like and two follistatin like domains 2, humanhuman

TSL 1 (best) BASIC

Gene TMEFF2, Length 3,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF2-203ENST00000409056 NCOA1Q15788 1441 aa9.59□□□□□ -0.87
TMEFF2-203ENST00000409056 SLC4A1APQ9BWU0 796 aaKnown RBP9.59□□□□□ -0.87
TMEFF2-203ENST00000409056 DEKP35659 375 aaKnown RBP9.59□□□□□ -0.87
TMEFF2-203ENST00000409056 ZNF777Q9ULD5 760 aaPredicted RBP9.59□□□□□ -0.87
TMEFF2-203ENST00000409056 THOC2Q8NI27 1593 aaKnown RBP9.59□□□□□ -0.87
TMEFF2-203ENST00000409056 SUPT6HQ7KZ85 1726 aaKnown RBP9.59□□□□□ -0.87
TMEFF2-203ENST00000409056 SAMD9Q5K651 1589 aa9.58□□□□□ -0.88
TMEFF2-203ENST00000409056 GAPVD1Q14C86 1478 aa9.58□□□□□ -0.88
TMEFF2-203ENST00000409056 PDS5BQ9NTI5 1447 aa9.57□□□□□ -0.88
TMEFF2-203ENST00000409056 ZBED9Q6R2W3 1325 aa9.56□□□□□ -0.88
TMEFF2-203ENST00000409056 ANKRD30BQ9BXX2 1392 aa9.56□□□□□ -0.88
TMEFF2-203ENST00000409056 KDM2AQ9Y2K7 1162 aa9.56□□□□□ -0.88
TMEFF2-203ENST00000409056 NPM2Q86SE8 214 aaKnown RBP9.56□□□□□ -0.88
TMEFF2-203ENST00000409056 LAMC3Q9Y6N6 1575 aa9.56□□□□□ -0.88
TMEFF2-203ENST00000409056 BCORL1Q5H9F3 1711 aa9.56□□□□□ -0.88
TMEFF2-203ENST00000409056 CUL7Q14999 1698 aa9.55□□□□□ -0.88
TMEFF2-203ENST00000409056 TEX14Q8IWB6 1497 aa9.55□□□□□ -0.88
TMEFF2-203ENST00000409056 ARHGEF11O15085 1522 aa9.54□□□□□ -0.88
TMEFF2-203ENST00000409056 EPRSP07814 1512 aaKnown RBP9.54□□□□□ -0.88
TMEFF2-203ENST00000409056 EHBP1L1Q8N3D4 1523 aa9.54□□□□□ -0.88
TMEFF2-203ENST00000409056 DHX29Q7Z478 1369 aaKnown RBP9.54□□□□□ -0.88
TMEFF2-203ENST00000409056 SPATA31E1Q6ZUB1 1445 aa9.54□□□□□ -0.88
TMEFF2-203ENST00000409056 HECW1Q76N89 1606 aa9.54□□□□□ -0.88
TMEFF2-203ENST00000409056 GCC2Q8IWJ2 1684 aa9.53□□□□□ -0.88
TMEFF2-203ENST00000409056 ABCC5O15440 1437 aa9.53□□□□□ -0.88
TMEFF2-203ENST00000409056 CCDC136Q96JN2 1154 aa9.52□□□□□ -0.88
TMEFF2-203ENST00000409056 NOP58Q9Y2X3 529 aaKnown RBP9.52□□□□□ -0.88
TMEFF2-203ENST00000409056 ABCA5Q8WWZ7 1642 aa9.52□□□□□ -0.88
TMEFF2-203ENST00000409056 PLIN1O60240 522 aa9.51□□□□□ -0.89
TMEFF2-203ENST00000409056 RPRD2Q5VT52 1461 aaKnown RBP9.51□□□□□ -0.89
TMEFF2-203ENST00000409056 EXOC6Q8TAG9 804 aa9.51□□□□□ -0.89
TMEFF2-203ENST00000409056 DAPK1P53355 1430 aa9.51□□□□□ -0.89
TMEFF2-203ENST00000409056 PKD2Q13563 968 aa9.5□□□□□ -0.89
TMEFF2-203ENST00000409056 RTN4Q9NQC3 1192 aaKnown RBP9.5□□□□□ -0.89
TMEFF2-203ENST00000409056 TCOF1Q13428 1488 aaKnown RBP9.5□□□□□ -0.89
TMEFF2-203ENST00000409056 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
TMEFF2-203ENST00000409056 USP47Q96K76 1375 aa9.5□□□□□ -0.89
TMEFF2-203ENST00000409056 PRG4Q92954 1404 aaPredicted RBP9.5□□□□□ -0.89
TMEFF2-203ENST00000409056 LAS1LQ9Y4W2 734 aaKnown RBP9.5□□□□□ -0.89
TMEFF2-203ENST00000409056 NUDCQ9Y266 331 aa9.49□□□□□ -0.89
TMEFF2-203ENST00000409056 KIF21AQ7Z4S6 1674 aa9.49□□□□□ -0.89
TMEFF2-203ENST00000409056 PNISRQ8TF01 805 aaKnown RBP9.49□□□□□ -0.89
TMEFF2-203ENST00000409056 PZPP20742 1482 aa9.48□□□□□ -0.89
TMEFF2-203ENST00000409056 ST20-MTHFSA0A0A6YYL1 179 aa9.48□□□□□ -0.89
TMEFF2-203ENST00000409056 ZNF608Q9ULD9 1512 aaPredicted RBP9.47□□□□□ -0.89
TMEFF2-203ENST00000409056 IL27Q8NEV9 243 aa9.47□□□□□ -0.89
TMEFF2-203ENST00000409056 TMC1Q8TDI8 760 aa9.47□□□□□ -0.89
TMEFF2-203ENST00000409056 WDR62O43379 1518 aa9.46□□□□□ -0.9
TMEFF2-203ENST00000409056 SMG6Q86US8 1419 aaKnown RBP9.46□□□□□ -0.9
TMEFF2-203ENST00000409056 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
TMEFF2-203ENST00000409056 FBLN2P98095 1184 aa9.45□□□□□ -0.9
TMEFF2-203ENST00000409056 RGL3Q3MIN7 710 aa9.45□□□□□ -0.9
TMEFF2-203ENST00000409056 CARD11Q9BXL7 1154 aa9.45□□□□□ -0.9
TMEFF2-203ENST00000409056 CFDP1Q9UEE9 299 aaPredicted RBP9.45□□□□□ -0.9
TMEFF2-203ENST00000409056 NUP153P49790 1475 aaKnown RBP9.44□□□□□ -0.9
TMEFF2-203ENST00000409056 DCAF11Q8TEB1 546 aa9.44□□□□□ -0.9
TMEFF2-203ENST00000409056 TARBP1Q13395 1621 aaKnown RBP9.44□□□□□ -0.9
TMEFF2-203ENST00000409056 IQGAP2Q13576 1575 aa9.44□□□□□ -0.9
TMEFF2-203ENST00000409056 NBPF1Q3BBV0 1214 aa9.44□□□□□ -0.9
TMEFF2-203ENST00000409056 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
TMEFF2-203ENST00000409056 CC2D1BQ5T0F9 858 aaKnown RBP9.43□□□□□ -0.9
TMEFF2-203ENST00000409056 PLB1Q6P1J6 1458 aa9.43□□□□□ -0.9
TMEFF2-203ENST00000409056 IPO9Q96P70 1041 aaKnown RBP9.43□□□□□ -0.9
TMEFF2-203ENST00000409056 C20orf194Q5TEA3 1177 aa9.43□□□□□ -0.9
TMEFF2-203ENST00000409056 KIF14Q15058 1648 aa9.42□□□□□ -0.9
TMEFF2-203ENST00000409056 RNF123Q5XPI4 1314 aa9.42□□□□□ -0.9
TMEFF2-203ENST00000409056 ERICH6BQ5W0A0 696 aa9.41□□□□□ -0.9
TMEFF2-203ENST00000409056 DNMT1P26358 1616 aaKnown RBP9.41□□□□□ -0.9
TMEFF2-203ENST00000409056 MIA2Q96PC5 1412 aa9.41□□□□□ -0.9
TMEFF2-203ENST00000409056 DISP1Q96F81 1524 aa9.41□□□□□ -0.9
TMEFF2-203ENST00000409056 HNRNPMP52272 730 aaKnown RBP eCLIP9.41□□□□□ -0.9
TMEFF2-203ENST00000409056 PBRM1Q86U86 1689 aa9.41□□□□□ -0.9
TMEFF2-203ENST00000409056 CAMSAP2Q08AD1 1489 aa9.4□□□□□ -0.9
TMEFF2-203ENST00000409056 MBD5Q9P267 1494 aa9.4□□□□□ -0.9
TMEFF2-203ENST00000409056 RRP1P56182 461 aaKnown RBP9.4□□□□□ -0.9
TMEFF2-203ENST00000409056 ZBTB47Q9UFB7 747 aaPredicted RBP9.4□□□□□ -0.9
TMEFF2-203ENST00000409056 KDM5CP41229 1560 aa9.4□□□□□ -0.9
TMEFF2-203ENST00000409056 ANP32AP39687 249 aaKnown RBP9.4□□□□□ -0.91
TMEFF2-203ENST00000409056 NUP155O75694 1391 aa9.4□□□□□ -0.91
TMEFF2-203ENST00000409056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.38□□□□□ -0.91
TMEFF2-203ENST00000409056 POLR1AO95602 1720 aaPredicted RBP9.38□□□□□ -0.91
TMEFF2-203ENST00000409056 RCAN3Q9UKA8 241 aa9.38□□□□□ -0.91
TMEFF2-203ENST00000409056 KIAA1107Q9UPP5 1409 aa9.38□□□□□ -0.91
TMEFF2-203ENST00000409056 PDE4AP27815 886 aa9.38□□□□□ -0.91
TMEFF2-203ENST00000409056 KIAA0586Q9BVV6 1533 aa9.37□□□□□ -0.91
TMEFF2-203ENST00000409056 ROCK1Q13464 1354 aa9.37□□□□□ -0.91
TMEFF2-203ENST00000409056 ADAMTS12P58397 1594 aa9.37□□□□□ -0.91
TMEFF2-203ENST00000409056 CRBNQ96SW2 442 aa9.37□□□□□ -0.91
TMEFF2-203ENST00000409056 GPATCH8Q9UKJ3 1502 aaKnown RBP9.37□□□□□ -0.91
TMEFF2-203ENST00000409056 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.37□□□□□ -0.91
TMEFF2-203ENST00000409056 ANKRD50Q9ULJ7 1429 aa9.35□□□□□ -0.91
TMEFF2-203ENST00000409056 NEFMP07197 916 aa9.35□□□□□ -0.91
TMEFF2-203ENST00000409056 LRPPRCP42704 1394 aaKnown RBP9.35□□□□□ -0.91
TMEFF2-203ENST00000409056 KIAA0556O60303 1618 aa9.35□□□□□ -0.91
TMEFF2-203ENST00000409056 DISP3Q9P2K9 1392 aa9.34□□□□□ -0.91
TMEFF2-203ENST00000409056 ROCK2O75116 1388 aaKnown RBP9.34□□□□□ -0.91
TMEFF2-203ENST00000409056 MYBBP1AQ9BQG0 1328 aaKnown RBP9.34□□□□□ -0.91
TMEFF2-203ENST00000409056 RAPGEF6Q8TEU7 1601 aa9.33□□□□□ -0.92
TMEFF2-203ENST00000409056 KIF15Q9NS87 1388 aa9.33□□□□□ -0.92
TMEFF2-203ENST00000409056 PER1O15534 1290 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms